RNA–Protein interactions for RNA: ENST00000465705.3

TMCO1-204, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5

Gene TMCO1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-204ENST00000465705 RBPJLQ9UBG7 517 aa13.19□□□□□ -0.3
TMCO1-204ENST00000465705 VWA5AO00534 786 aa13.18□□□□□ -0.3
TMCO1-204ENST00000465705 PLA2G6O60733 806 aa13.18□□□□□ -0.3
TMCO1-204ENST00000465705 DDAH1O94760 285 aa13.18□□□□□ -0.3
TMCO1-204ENST00000465705 GOLGA8HP0CJ92 632 aa13.18□□□□□ -0.3
TMCO1-204ENST00000465705 FCGRTP55899 365 aa13.18□□□□□ -0.3
TMCO1-204ENST00000465705 PLS1Q14651 629 aa13.18□□□□□ -0.3
TMCO1-204ENST00000465705 TTBK2Q6IQ55 1244 aa13.18□□□□□ -0.3
TMCO1-204ENST00000465705 POTEEQ6S8J3 1075 aa13.18□□□□□ -0.3
TMCO1-204ENST00000465705 ZNF654Q8IZM8 581 aa13.18□□□□□ -0.3
TMCO1-204ENST00000465705 NUP133Q8WUM0 1156 aa13.18□□□□□ -0.3
TMCO1-204ENST00000465705 TM6SF1Q9BZW5 370 aa13.18□□□□□ -0.3
TMCO1-204ENST00000465705 BTBD7Q9P203 1132 aa13.18□□□□□ -0.3
TMCO1-204ENST00000465705 ADAMTS5Q9UNA0 930 aa13.18□□□□□ -0.3
TMCO1-204ENST00000465705 SLC12A7Q9Y666 1083 aa13.18□□□□□ -0.3
TMCO1-204ENST00000465705 CYP46A1Q9Y6A2 500 aa13.18□□□□□ -0.3
TMCO1-204ENST00000465705 CASP8AP2Q9UKL3 1982 aa13.18□□□□□ -0.3
TMCO1-204ENST00000465705 TNPO2O14787 897 aaKnown RBP13.17□□□□□ -0.3
TMCO1-204ENST00000465705 ZBED4O75132 1171 aa13.17□□□□□ -0.3
TMCO1-204ENST00000465705 CNMDO75829 334 aa13.17□□□□□ -0.3
TMCO1-204ENST00000465705 FMNL1O95466 1100 aaPredicted RBP13.17□□□□□ -0.3
TMCO1-204ENST00000465705 FDX1P10109 184 aa13.17□□□□□ -0.3
TMCO1-204ENST00000465705 HOXB1P14653 301 aaPredicted RBP13.17□□□□□ -0.3
TMCO1-204ENST00000465705 SLC16A2P36021 539 aa13.17□□□□□ -0.3
TMCO1-204ENST00000465705 PSMC4P43686 418 aa13.17□□□□□ -0.3
TMCO1-204ENST00000465705 TROAPQ12815 778 aa13.17□□□□□ -0.3
TMCO1-204ENST00000465705 SYDE2Q5VT97 1194 aa13.17□□□□□ -0.3
TMCO1-204ENST00000465705 SYNE3Q6ZMZ3 975 aa13.17□□□□□ -0.3
TMCO1-204ENST00000465705 RUFY3Q7L099 469 aa13.17□□□□□ -0.3
TMCO1-204ENST00000465705 CTCFLQ8NI51 663 aaPredicted RBP13.17□□□□□ -0.3
TMCO1-204ENST00000465705 MYL10Q9BUA6 226 aa13.17□□□□□ -0.3
TMCO1-204ENST00000465705 UPF3BQ9BZI7 483 aaKnown RBP13.17□□□□□ -0.3
TMCO1-204ENST00000465705 ARHGAP39Q9C0H5 1083 aa13.17□□□□□ -0.3
TMCO1-204ENST00000465705 SPATC1LQ9H0A9 340 aa13.17□□□□□ -0.3
TMCO1-204ENST00000465705 EFCC1Q9HA90 598 aa13.17□□□□□ -0.3
TMCO1-204ENST00000465705 CWC22Q9HCG8 908 aaKnown RBP13.17□□□□□ -0.3
TMCO1-204ENST00000465705 ZSWIM6Q9HCJ5 1215 aa13.17□□□□□ -0.3
TMCO1-204ENST00000465705 PRR12Q9ULL5 1215 aa13.17□□□□□ -0.3
TMCO1-204ENST00000465705 TRIM17Q9Y577 477 aa13.17□□□□□ -0.3
TMCO1-204ENST00000465705 ZSWIM8A7E2V4 1837 aa13.16□□□□□ -0.3
TMCO1-204ENST00000465705 COL11A1P12107 1806 aaPredicted RBP13.16□□□□□ -0.3
TMCO1-204ENST00000465705 DHX16O60231 1041 aaKnown RBP13.16□□□□□ -0.3
TMCO1-204ENST00000465705 CALM1P0DP23 149 aa13.16□□□□□ -0.3
TMCO1-204ENST00000465705 CALM2P0DP24 149 aa13.16□□□□□ -0.3
TMCO1-204ENST00000465705 CALM3P0DP25 149 aa13.16□□□□□ -0.3
TMCO1-204ENST00000465705 MAPK4P31152 587 aa13.16□□□□□ -0.3
TMCO1-204ENST00000465705 KIF5BP33176 963 aa13.16□□□□□ -0.3
TMCO1-204ENST00000465705 GRM4Q14833 912 aa13.16□□□□□ -0.3
TMCO1-204ENST00000465705 TMEM132BQ14DG7 1078 aa13.16□□□□□ -0.3
TMCO1-204ENST00000465705 Q3C1V9 767 aa13.16□□□□□ -0.3
TMCO1-204ENST00000465705 WDR78Q5VTH9 848 aa13.16□□□□□ -0.3
TMCO1-204ENST00000465705 BTNL9Q6UXG8 535 aa13.16□□□□□ -0.3
TMCO1-204ENST00000465705 Q6ZUG5 572 aa13.16□□□□□ -0.3
TMCO1-204ENST00000465705 CTU1Q7Z7A3 348 aaKnown RBP13.16□□□□□ -0.3
TMCO1-204ENST00000465705 SGMS1Q86VZ5 419 aa13.16□□□□□ -0.3
TMCO1-204ENST00000465705 MICU3Q86XE3 530 aa13.16□□□□□ -0.3
TMCO1-204ENST00000465705 CPXCR1Q8N123 301 aa13.16□□□□□ -0.3
TMCO1-204ENST00000465705 TEX13BQ9BXU2 312 aa13.16□□□□□ -0.3
TMCO1-204ENST00000465705 SLC38A10Q9HBR0 1119 aa13.16□□□□□ -0.3
TMCO1-204ENST00000465705 KLF18A0A0U1RQI7 1052 aa13.15□□□□□ -0.3
TMCO1-204ENST00000465705 FAM205CA6NFA0 338 aa13.15□□□□□ -0.3
TMCO1-204ENST00000465705 GNRH1P01148 92 aa13.15□□□□□ -0.3
TMCO1-204ENST00000465705 HOXD10P28358 340 aa13.15□□□□□ -0.3
TMCO1-204ENST00000465705 CTGFP29279 349 aa13.15□□□□□ -0.3
TMCO1-204ENST00000465705 COPB2P35606 906 aa13.15□□□□□ -0.3
TMCO1-204ENST00000465705 STAT3P40763 770 aa13.15□□□□□ -0.3
TMCO1-204ENST00000465705 OAZ1P54368 228 aa13.15□□□□□ -0.3
TMCO1-204ENST00000465705 SNRNP48Q6IEG0 339 aaKnown RBP13.15□□□□□ -0.3
TMCO1-204ENST00000465705 APOA5Q6Q788 366 aa13.15□□□□□ -0.3
TMCO1-204ENST00000465705 OTOP1Q7RTM1 612 aa13.15□□□□□ -0.3
TMCO1-204ENST00000465705 REPS2Q8NFH8 660 aa13.15□□□□□ -0.3
TMCO1-204ENST00000465705 BRF1Q92994 677 aa13.15□□□□□ -0.3
TMCO1-204ENST00000465705 COA7Q96BR5 231 aa13.15□□□□□ -0.3
TMCO1-204ENST00000465705 TRIM47Q96LD4 638 aa13.15□□□□□ -0.3
TMCO1-204ENST00000465705 MAP3K14Q99558 947 aa13.15□□□□□ -0.3
TMCO1-204ENST00000465705 MOV10L1Q9BXT6 1211 aaKnown RBP13.15□□□□□ -0.3
TMCO1-204ENST00000465705 C22orf23Q9BZE7 217 aa13.15□□□□□ -0.3
TMCO1-204ENST00000465705 UBA5Q9GZZ9 404 aa13.15□□□□□ -0.3
TMCO1-204ENST00000465705 PORCNQ9H237 461 aa13.15□□□□□ -0.3
TMCO1-204ENST00000465705 RAVER2Q9HCJ3 691 aaKnown RBP13.15□□□□□ -0.3
TMCO1-204ENST00000465705 MAD2L2Q9UI95 211 aa13.15□□□□□ -0.3
TMCO1-204ENST00000465705 ZNF214Q9UL59 606 aaPredicted RBP13.15□□□□□ -0.3
TMCO1-204ENST00000465705 NAP1L2Q9ULW6 460 aaPredicted RBP13.15□□□□□ -0.3
TMCO1-204ENST00000465705 MGAMO43451 1857 aa13.14□□□□□ -0.31
TMCO1-204ENST00000465705 PALM3A6NDB9 673 aaPredicted RBP13.14□□□□□ -0.31
TMCO1-204ENST00000465705 KLRF2D3W0D1 207 aa13.14□□□□□ -0.31
TMCO1-204ENST00000465705 ATP2A1O14983 1001 aa13.14□□□□□ -0.31
TMCO1-204ENST00000465705 ZBTB43O43298 467 aa13.14□□□□□ -0.31
TMCO1-204ENST00000465705 SLC25A27O95847 323 aa13.14□□□□□ -0.31
TMCO1-204ENST00000465705 ERCC3P19447 782 aa13.14□□□□□ -0.31
TMCO1-204ENST00000465705 RXRAP19793 462 aa13.14□□□□□ -0.31
TMCO1-204ENST00000465705 SLC4A3P48751 1232 aa13.14□□□□□ -0.31
TMCO1-204ENST00000465705 SNAP25P60880 206 aa13.14□□□□□ -0.31
TMCO1-204ENST00000465705 CAP1Q01518 475 aa13.14□□□□□ -0.31
TMCO1-204ENST00000465705 CCDC174Q6PII3 467 aa13.14□□□□□ -0.31
TMCO1-204ENST00000465705 NCAPG2Q86XI2 1143 aa13.14□□□□□ -0.31
TMCO1-204ENST00000465705 RAB11FIP4Q86YS3 637 aa13.14□□□□□ -0.31
TMCO1-204ENST00000465705 RIOX2Q8IUF8 465 aa13.14□□□□□ -0.31
TMCO1-204ENST00000465705 CCDC144CPQ8IYA2 1237 aa13.14□□□□□ -0.31
TMCO1-204ENST00000465705 STAG2Q8N3U4 1231 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms