RNA–Protein interactions for RNA: ENST00000464018.5

SEMA6C-205, Transcript of semaphorin 6C, humanhuman

TSL 2

Gene SEMA6C, Length 485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-205ENST00000464018 PLS1Q14651 629 aa16.42■□□□□ 0.22
SEMA6C-205ENST00000464018 RAB11FIP4Q86YS3 637 aa16.42■□□□□ 0.22
SEMA6C-205ENST00000464018 CPXCR1Q8N123 301 aa16.42■□□□□ 0.22
SEMA6C-205ENST00000464018 ZNF274Q96GC6 653 aaPredicted RBP16.42■□□□□ 0.22
SEMA6C-205ENST00000464018 LZTS2Q9BRK4 669 aa16.42■□□□□ 0.22
SEMA6C-205ENST00000464018 TEX13BQ9BXU2 312 aa16.42■□□□□ 0.22
SEMA6C-205ENST00000464018 VAT1LQ9HCJ6 419 aa16.42■□□□□ 0.22
SEMA6C-205ENST00000464018 HPS5Q9UPZ3 1129 aa16.42■□□□□ 0.22
SEMA6C-205ENST00000464018 RIPK3Q9Y572 518 aa16.42■□□□□ 0.22
SEMA6C-205ENST00000464018 CTDP1Q9Y5B0 961 aaPredicted RBP16.42■□□□□ 0.22
SEMA6C-205ENST00000464018 PLXNB2O15031 1838 aa16.42■□□□□ 0.22
SEMA6C-205ENST00000464018 CYTH3O43739 400 aa16.41■□□□□ 0.22
SEMA6C-205ENST00000464018 ERCC3P19447 782 aa16.41■□□□□ 0.22
SEMA6C-205ENST00000464018 PDIA3P30101 505 aaKnown RBP16.41■□□□□ 0.22
SEMA6C-205ENST00000464018 PPP2R5BQ15173 497 aa16.41■□□□□ 0.22
SEMA6C-205ENST00000464018 CCDC174Q6PII3 467 aa16.41■□□□□ 0.22
SEMA6C-205ENST00000464018 OTOP1Q7RTM1 612 aa16.41■□□□□ 0.22
SEMA6C-205ENST00000464018 MICU3Q86XE3 530 aa16.41■□□□□ 0.22
SEMA6C-205ENST00000464018 CCDC144CPQ8IYA2 1237 aa16.41■□□□□ 0.22
SEMA6C-205ENST00000464018 SRBD1Q8N5C6 995 aaKnown RBP16.41■□□□□ 0.22
SEMA6C-205ENST00000464018 AGBL1Q96MI9 1066 aa16.41■□□□□ 0.22
SEMA6C-205ENST00000464018 MROH8Q9H579 483 aa16.41■□□□□ 0.22
SEMA6C-205ENST00000464018 GJD2Q9UKL4 321 aa16.41■□□□□ 0.22
SEMA6C-205ENST00000464018 ECM2O94769 699 aaPredicted RBP16.4■□□□□ 0.22
SEMA6C-205ENST00000464018 PLEKHA8P1O95397 391 aa16.4■□□□□ 0.22
SEMA6C-205ENST00000464018 ICAM1P05362 532 aa16.4■□□□□ 0.22
SEMA6C-205ENST00000464018 CDC27P30260 824 aa16.4■□□□□ 0.22
SEMA6C-205ENST00000464018 COPB2P35606 906 aa16.4■□□□□ 0.22
SEMA6C-205ENST00000464018 AK2P54819 239 aa16.4■□□□□ 0.22
SEMA6C-205ENST00000464018 RTN1Q16799 776 aa16.4■□□□□ 0.22
SEMA6C-205ENST00000464018 SNRNP48Q6IEG0 339 aaKnown RBP16.4■□□□□ 0.22
SEMA6C-205ENST00000464018 GPR142Q7Z601 462 aa16.4■□□□□ 0.22
SEMA6C-205ENST00000464018 PLEKHH3Q7Z736 793 aa16.4■□□□□ 0.22
SEMA6C-205ENST00000464018 CTU1Q7Z7A3 348 aaKnown RBP16.4■□□□□ 0.22
SEMA6C-205ENST00000464018 LARP6Q9BRS8 491 aaKnown RBP16.4■□□□□ 0.22
SEMA6C-205ENST00000464018 SPZ1Q9BXG8 430 aa16.4■□□□□ 0.22
SEMA6C-205ENST00000464018 RBM28Q9NW13 759 aaKnown RBP16.4■□□□□ 0.22
SEMA6C-205ENST00000464018 NID2Q14112 1375 aa16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 GOLGA8AA7E2F4 631 aa16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 GOLGA8BA8MQT2 603 aa16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 TNPO2O14787 897 aaKnown RBP16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 STRNO43815 780 aa16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 PTPREP23469 700 aa16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 HOXD10P28358 340 aa16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 ADD1P35611 737 aaKnown RBP16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 FUT2Q10981 343 aa16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 ANKRD1Q15327 319 aa16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 CDC37Q16543 378 aaPredicted RBP16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 TKFCQ3LXA3 575 aa16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 MORN1Q5T089 497 aa16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 TMTC3Q6ZXV5 915 aa16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 NCAPG2Q86XI2 1143 aa16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 CCAR1Q8IX12 1150 aaKnown RBP16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 USP6NLQ92738 828 aa16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 COA7Q96BR5 231 aa16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 SRRDQ9UH36 339 aa16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 PNMA2Q9UL42 364 aa16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 TRIM17Q9Y577 477 aa16.39■□□□□ 0.21
SEMA6C-205ENST00000464018 ZBTB5O15062 677 aa16.38■□□□□ 0.21
SEMA6C-205ENST00000464018 METAP2P50579 478 aaKnown RBP eCLIP16.38■□□□□ 0.21
SEMA6C-205ENST00000464018 PRMT2P55345 433 aa16.38■□□□□ 0.21
SEMA6C-205ENST00000464018 RABEP1Q15276 862 aa16.38■□□□□ 0.21
SEMA6C-205ENST00000464018 QRICH1Q2TAL8 776 aa16.38■□□□□ 0.21
SEMA6C-205ENST00000464018 CMTR1Q8N1G2 835 aaKnown RBP16.38■□□□□ 0.21
SEMA6C-205ENST00000464018 CHST13Q8NET6 341 aa16.38■□□□□ 0.21
SEMA6C-205ENST00000464018 IL27Q8NEV9 243 aa16.38■□□□□ 0.21
SEMA6C-205ENST00000464018 PIGSQ96S52 555 aa16.38■□□□□ 0.21
SEMA6C-205ENST00000464018 CCPG1Q9ULG6 757 aa16.38■□□□□ 0.21
SEMA6C-205ENST00000464018 TPCN1Q9ULQ1 816 aa16.38■□□□□ 0.21
SEMA6C-205ENST00000464018 NAP1L2Q9ULW6 460 aaPredicted RBP16.38■□□□□ 0.21
SEMA6C-205ENST00000464018 GABRQQ9UN88 632 aa16.38■□□□□ 0.21
SEMA6C-205ENST00000464018 PNMA6FA0A0J9YX94 578 aa16.37■□□□□ 0.21
SEMA6C-205ENST00000464018 CCDC196A0A1B0GTZ2 297 aa16.37■□□□□ 0.21
SEMA6C-205ENST00000464018 SLC15A5A6NIM6 579 aa16.37■□□□□ 0.21
SEMA6C-205ENST00000464018 DHX16O60231 1041 aaKnown RBP16.37■□□□□ 0.21
SEMA6C-205ENST00000464018 SLC4A3P48751 1232 aa16.37■□□□□ 0.21
SEMA6C-205ENST00000464018 ABRAQ8N0Z2 381 aa16.37■□□□□ 0.21
SEMA6C-205ENST00000464018 TRERF1Q96PN7 1200 aa16.37■□□□□ 0.21
SEMA6C-205ENST00000464018 FBXO40Q9UH90 709 aa16.37■□□□□ 0.21
SEMA6C-205ENST00000464018 PTPN22Q9Y2R2 807 aa16.37■□□□□ 0.21
SEMA6C-205ENST00000464018 PFKFB2O60825 505 aa16.36■□□□□ 0.21
SEMA6C-205ENST00000464018 PPP1R11O60927 126 aaPredicted RBP16.36■□□□□ 0.21
SEMA6C-205ENST00000464018 ALAS1P13196 640 aa16.36■□□□□ 0.21
SEMA6C-205ENST00000464018 TAL1P17542 331 aaPredicted RBP16.36■□□□□ 0.21
SEMA6C-205ENST00000464018 FLT3LGP49771 235 aa16.36■□□□□ 0.21
SEMA6C-205ENST00000464018 CCT2P78371 535 aaKnown RBP16.36■□□□□ 0.21
SEMA6C-205ENST00000464018 PRKCZQ05513 592 aa16.36■□□□□ 0.21
SEMA6C-205ENST00000464018 GRB14Q14449 540 aa16.36■□□□□ 0.21
SEMA6C-205ENST00000464018 NTRK3Q16288 839 aa16.36■□□□□ 0.21
SEMA6C-205ENST00000464018 PKN2Q16513 984 aaKnown RBP16.36■□□□□ 0.21
SEMA6C-205ENST00000464018 WDR78Q5VTH9 848 aa16.36■□□□□ 0.21
SEMA6C-205ENST00000464018 FBXO11Q86XK2 927 aa16.36■□□□□ 0.21
SEMA6C-205ENST00000464018 CCDC82Q8N4S0 544 aa16.36■□□□□ 0.21
SEMA6C-205ENST00000464018 NUDT12Q9BQG2 462 aa16.36■□□□□ 0.21
SEMA6C-205ENST00000464018 RNF146Q9NTX7 359 aa16.36■□□□□ 0.21
SEMA6C-205ENST00000464018 PLXNA1Q9UIW2 1896 aa16.35■□□□□ 0.21
SEMA6C-205ENST00000464018 FCER1AP12319 257 aa16.35■□□□□ 0.21
SEMA6C-205ENST00000464018 MAP2K5Q13163 448 aa16.35■□□□□ 0.21
SEMA6C-205ENST00000464018 IRF5Q13568 498 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms