RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 MTMR4Q9NYA4 1195 aa20.64■□□□□ 0.89
HMGN1-209ENST00000463631 CLIP2Q9UDT6 1046 aa20.64■□□□□ 0.89
HMGN1-209ENST00000463631 BDP1A6H8Y1 2624 aa20.64■□□□□ 0.89
HMGN1-209ENST00000463631 MUC3AQ02505 3323 aa20.64■□□□□ 0.89
HMGN1-209ENST00000463631 A0A0U1RQG5 324 aaPredicted RBP20.63■□□□□ 0.89
HMGN1-209ENST00000463631 MINDY4BA8MYZ0 360 aa20.63■□□□□ 0.89
HMGN1-209ENST00000463631 GPAA1O43292 621 aa20.63■□□□□ 0.89
HMGN1-209ENST00000463631 TTLL1O95922 423 aa20.63■□□□□ 0.89
HMGN1-209ENST00000463631 ASGR1P07306 291 aa20.63■□□□□ 0.89
HMGN1-209ENST00000463631 FDX1P10109 184 aa20.63■□□□□ 0.89
HMGN1-209ENST00000463631 PPIGQ13427 754 aaKnown RBP eCLIP20.63■□□□□ 0.89
HMGN1-209ENST00000463631 ARMCX2Q7L311 632 aa20.63■□□□□ 0.89
HMGN1-209ENST00000463631 SYMPKQ92797 1274 aaKnown RBP20.63■□□□□ 0.89
HMGN1-209ENST00000463631 KIFC2Q96AC6 838 aa20.63■□□□□ 0.89
HMGN1-209ENST00000463631 KATNBL1Q9H079 304 aa20.63■□□□□ 0.89
HMGN1-209ENST00000463631 RAVER2Q9HCJ3 691 aaKnown RBP20.63■□□□□ 0.89
HMGN1-209ENST00000463631 CTDP1Q9Y5B0 961 aaPredicted RBP20.63■□□□□ 0.89
HMGN1-209ENST00000463631 RNF113AO15541 343 aaKnown RBP20.62■□□□□ 0.89
HMGN1-209ENST00000463631 SMARCA5O60264 1052 aaPredicted RBP20.62■□□□□ 0.89
HMGN1-209ENST00000463631 FAM126BQ8IXS8 530 aa20.62■□□□□ 0.89
HMGN1-209ENST00000463631 TIFAQ96CG3 184 aa20.62■□□□□ 0.89
HMGN1-209ENST00000463631 GPATCH3Q96I76 525 aa20.62■□□□□ 0.89
HMGN1-209ENST00000463631 ZNF576Q9H609 170 aa20.62■□□□□ 0.89
HMGN1-209ENST00000463631 ARVCFO00192 962 aa20.61■□□□□ 0.89
HMGN1-209ENST00000463631 CTAGE5O15320 804 aa20.61■□□□□ 0.89
HMGN1-209ENST00000463631 TDO2P48775 406 aa20.61■□□□□ 0.89
HMGN1-209ENST00000463631 IRX5P78411 483 aaPredicted RBP20.61■□□□□ 0.89
HMGN1-209ENST00000463631 TMEM240Q5SV17 173 aa20.61■□□□□ 0.89
HMGN1-209ENST00000463631 PSRC1Q6PGN9 363 aaPredicted RBP20.61■□□□□ 0.89
HMGN1-209ENST00000463631 C16orf59Q7L2K0 433 aa20.61■□□□□ 0.89
HMGN1-209ENST00000463631 CCDC144CPQ8IYA2 1237 aa20.61■□□□□ 0.89
HMGN1-209ENST00000463631 ZNF444Q8N0Y2 327 aaPredicted RBP20.61■□□□□ 0.89
HMGN1-209ENST00000463631 FAM133AQ8N9E0 248 aa20.61■□□□□ 0.89
HMGN1-209ENST00000463631 PRDM1O75626 825 aa20.6■□□□□ 0.89
HMGN1-209ENST00000463631 GNASQ5JWF2 1037 aa20.6■□□□□ 0.89
HMGN1-209ENST00000463631 STK11IPQ8N1F8 1099 aa20.6■□□□□ 0.89
HMGN1-209ENST00000463631 LRRC47Q8N1G4 583 aaKnown RBP20.6■□□□□ 0.89
HMGN1-209ENST00000463631 TMEM199Q8N511 208 aa20.6■□□□□ 0.89
HMGN1-209ENST00000463631 USP38Q8NB14 1042 aa20.6■□□□□ 0.89
HMGN1-209ENST00000463631 NEDD1Q8NHV4 660 aa20.6■□□□□ 0.89
HMGN1-209ENST00000463631 ACAD9Q9H845 621 aa20.6■□□□□ 0.89
HMGN1-209ENST00000463631 M0R2C6 588 aa20.59■□□□□ 0.89
HMGN1-209ENST00000463631 BMP3P12645 472 aa20.59■□□□□ 0.89
HMGN1-209ENST00000463631 CSF2RAP15509 400 aa20.59■□□□□ 0.89
HMGN1-209ENST00000463631 SLC4A3P48751 1232 aa20.59■□□□□ 0.89
HMGN1-209ENST00000463631 PRDM6Q9NQX0 595 aa20.59■□□□□ 0.89
HMGN1-209ENST00000463631 RCAN3Q9UKA8 241 aa20.59■□□□□ 0.89
HMGN1-209ENST00000463631 CHD7Q9P2D1 2997 aa20.58■□□□□ 0.89
HMGN1-209ENST00000463631 MYO9BQ13459 2157 aa20.58■□□□□ 0.89
HMGN1-209ENST00000463631 TLR3O15455 904 aaKnown RBP20.58■□□□□ 0.89
HMGN1-209ENST00000463631 CD4P01730 458 aa20.58■□□□□ 0.89
HMGN1-209ENST00000463631 STAT2P52630 851 aa20.58■□□□□ 0.89
HMGN1-209ENST00000463631 LRRFIP1Q32MZ4 808 aaKnown RBP20.58■□□□□ 0.89
HMGN1-209ENST00000463631 TJAP1Q5JTD0 557 aa20.58■□□□□ 0.89
HMGN1-209ENST00000463631 SLFN13Q68D06 897 aa20.58■□□□□ 0.89
HMGN1-209ENST00000463631 IFNL3Q8IZI9 196 aa20.58■□□□□ 0.89
HMGN1-209ENST00000463631 SLC43A3Q8NBI5 491 aa20.58■□□□□ 0.89
HMGN1-209ENST00000463631 GMCL1Q96IK5 515 aa20.58■□□□□ 0.89
HMGN1-209ENST00000463631 PBX4Q9BYU1 374 aa20.58■□□□□ 0.89
HMGN1-209ENST00000463631 A1CFQ9NQ94 594 aaKnown RBP20.58■□□□□ 0.89
HMGN1-209ENST00000463631 ZNF536O15090 1300 aa20.57■□□□□ 0.88
HMGN1-209ENST00000463631 PATL2C9JE40 543 aaKnown RBP20.57■□□□□ 0.88
HMGN1-209ENST00000463631 CABYRO75952 493 aa20.57■□□□□ 0.88
HMGN1-209ENST00000463631 TSPY3P0CV98 308 aa20.57■□□□□ 0.88
HMGN1-209ENST00000463631 TSPY8P0CW00 308 aa20.57■□□□□ 0.88
HMGN1-209ENST00000463631 CNTN2Q02246 1040 aa20.57■□□□□ 0.88
HMGN1-209ENST00000463631 PDE4BQ07343 736 aa20.57■□□□□ 0.88
HMGN1-209ENST00000463631 CCDC129Q6ZRS4 1044 aa20.57■□□□□ 0.88
HMGN1-209ENST00000463631 FAM160B2Q86V87 743 aa20.57■□□□□ 0.88
HMGN1-209ENST00000463631 SEZ6LQ9BYH1 1024 aa20.57■□□□□ 0.88
HMGN1-209ENST00000463631 NACAP1Q9BZK3 213 aa20.57■□□□□ 0.88
HMGN1-209ENST00000463631 DCTPP1Q9H773 170 aa20.57■□□□□ 0.88
HMGN1-209ENST00000463631 HOMER2Q9NSB8 354 aa20.57■□□□□ 0.88
HMGN1-209ENST00000463631 ASTN1O14525 1302 aa20.56■□□□□ 0.88
HMGN1-209ENST00000463631 ASB14A6NK59 587 aa20.56■□□□□ 0.88
HMGN1-209ENST00000463631 TMEM232C9JQI7 657 aa20.56■□□□□ 0.88
HMGN1-209ENST00000463631 PLA2G6O60733 806 aa20.56■□□□□ 0.88
HMGN1-209ENST00000463631 APPP05067 770 aa20.56■□□□□ 0.88
HMGN1-209ENST00000463631 TKFCQ3LXA3 575 aa20.56■□□□□ 0.88
HMGN1-209ENST00000463631 AKNAD1Q5T1N1 836 aa20.56■□□□□ 0.88
HMGN1-209ENST00000463631 TSHZ3Q63HK5 1081 aa20.56■□□□□ 0.88
HMGN1-209ENST00000463631 CHURC1Q8WUH1 139 aa20.56■□□□□ 0.88
HMGN1-209ENST00000463631 VTI1AQ96AJ9 217 aa20.56■□□□□ 0.88
HMGN1-209ENST00000463631 PPP1R12CQ9BZL4 782 aa20.56■□□□□ 0.88
HMGN1-209ENST00000463631 IL23AQ9NPF7 189 aa20.56■□□□□ 0.88
HMGN1-209ENST00000463631 RNF146Q9NTX7 359 aa20.56■□□□□ 0.88
HMGN1-209ENST00000463631 GNEQ9Y223 722 aaKnown RBP20.56■□□□□ 0.88
HMGN1-209ENST00000463631 LCTP09848 1927 aa20.56■□□□□ 0.88
HMGN1-209ENST00000463631 TRANK1O15050 2925 aa20.55■□□□□ 0.88
HMGN1-209ENST00000463631 PBX2P40425 430 aa20.55■□□□□ 0.88
HMGN1-209ENST00000463631 TNFAIP2Q03169 654 aa20.55■□□□□ 0.88
HMGN1-209ENST00000463631 PPP4R3BQ5MIZ7 849 aa20.55■□□□□ 0.88
HMGN1-209ENST00000463631 C20orf194Q5TEA3 1177 aa20.55■□□□□ 0.88
HMGN1-209ENST00000463631 ZNF365Q70YC5 407 aa20.55■□□□□ 0.88
HMGN1-209ENST00000463631 STAG1Q8WVM7 1258 aa20.55■□□□□ 0.88
HMGN1-209ENST00000463631 HERVK_113Q902F9 699 aa20.55■□□□□ 0.88
HMGN1-209ENST00000463631 GAS2L1Q99501 681 aaPredicted RBP20.55■□□□□ 0.88
HMGN1-209ENST00000463631 TTC41PQ6P2S7 1318 aa20.54■□□□□ 0.88
HMGN1-209ENST00000463631 GBF1Q92538 1859 aa20.54■□□□□ 0.88
HMGN1-209ENST00000463631 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms