RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 NOL9Q5SY16 702 aaKnown RBP21.75■■□□□ 1.07
CCDC78-206ENST00000463539 PNMA8AQ86V59 439 aaPredicted RBP21.75■■□□□ 1.07
CCDC78-206ENST00000463539 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.75■■□□□ 1.07
CCDC78-206ENST00000463539 WDR18Q9BV38 432 aa21.75■■□□□ 1.07
CCDC78-206ENST00000463539 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.75■■□□□ 1.07
CCDC78-206ENST00000463539 A0A1W2PQ27 194 aa21.74■■□□□ 1.07
CCDC78-206ENST00000463539 A0A1W2PQ64 194 aa21.74■■□□□ 1.07
CCDC78-206ENST00000463539 A0A1W2PQD8 194 aa21.74■■□□□ 1.07
CCDC78-206ENST00000463539 PLA2G6O60733 806 aa21.74■■□□□ 1.07
CCDC78-206ENST00000463539 USP14P54578 494 aa21.74■■□□□ 1.07
CCDC78-206ENST00000463539 MTMR2Q13614 643 aa21.74■■□□□ 1.07
CCDC78-206ENST00000463539 CCDC183Q5T5S1 534 aa21.74■■□□□ 1.07
CCDC78-206ENST00000463539 KRT25Q7Z3Z0 450 aa21.74■■□□□ 1.07
CCDC78-206ENST00000463539 FAM160B2Q86V87 743 aa21.74■■□□□ 1.07
CCDC78-206ENST00000463539 CCAR1Q8IX12 1150 aaKnown RBP21.74■■□□□ 1.07
CCDC78-206ENST00000463539 AMNQ9BXJ7 453 aa21.74■■□□□ 1.07
CCDC78-206ENST00000463539 FEM1BQ9UK73 627 aa21.74■■□□□ 1.07
CCDC78-206ENST00000463539 PCDHA1Q9Y5I3 950 aa21.74■■□□□ 1.07
CCDC78-206ENST00000463539 WDR46O15213 610 aaKnown RBP21.73■■□□□ 1.07
CCDC78-206ENST00000463539 PPP1R12BO60237 982 aaPredicted RBP21.73■■□□□ 1.07
CCDC78-206ENST00000463539 USP2O75604 605 aaPredicted RBP21.73■■□□□ 1.07
CCDC78-206ENST00000463539 BMP15O95972 392 aa21.73■■□□□ 1.07
CCDC78-206ENST00000463539 SPP2Q13103 211 aa21.73■■□□□ 1.07
CCDC78-206ENST00000463539 DOCK1Q14185 1865 aa21.73■■□□□ 1.07
CCDC78-206ENST00000463539 ZNF280CQ8ND82 737 aa21.73■■□□□ 1.07
CCDC78-206ENST00000463539 RIC8AQ9NPQ8 531 aa21.73■■□□□ 1.07
CCDC78-206ENST00000463539 SNAP25P60880 206 aa21.73■■□□□ 1.07
CCDC78-206ENST00000463539 CCDC73Q6ZRK6 1079 aa21.73■■□□□ 1.07
CCDC78-206ENST00000463539 FBXO11Q86XK2 927 aa21.73■■□□□ 1.07
CCDC78-206ENST00000463539 MRPS27Q92552 414 aaKnown RBP21.73■■□□□ 1.07
CCDC78-206ENST00000463539 CUL5Q93034 780 aa21.73■■□□□ 1.07
CCDC78-206ENST00000463539 KIFC2Q96AC6 838 aa21.73■■□□□ 1.07
CCDC78-206ENST00000463539 ZHX2Q9Y6X8 837 aa21.73■■□□□ 1.07
CCDC78-206ENST00000463539 POTECB2RU33 542 aa21.72■■□□□ 1.07
CCDC78-206ENST00000463539 NF2P35240 595 aa21.72■■□□□ 1.07
CCDC78-206ENST00000463539 AXDND1Q5T1B0 1012 aaPredicted RBP21.72■■□□□ 1.07
CCDC78-206ENST00000463539 FSIP1Q8NA03 581 aa21.72■■□□□ 1.07
CCDC78-206ENST00000463539 CDCA5Q96FF9 252 aa21.72■■□□□ 1.07
CCDC78-206ENST00000463539 DACT1Q9NYF0 836 aa21.72■■□□□ 1.07
CCDC78-206ENST00000463539 MRPL12P52815 198 aaKnown RBP21.71■■□□□ 1.07
CCDC78-206ENST00000463539 BACE1P56817 501 aa21.71■■□□□ 1.07
CCDC78-206ENST00000463539 NONOQ15233 471 aaKnown RBP eCLIP21.71■■□□□ 1.07
CCDC78-206ENST00000463539 KRI1Q8N9T8 703 aaKnown RBP21.71■■□□□ 1.07
CCDC78-206ENST00000463539 GLT8D2Q9H1C3 349 aa21.71■■□□□ 1.07
CCDC78-206ENST00000463539 PSTPIP2Q9H939 334 aa21.71■■□□□ 1.07
CCDC78-206ENST00000463539 BIN2Q9UBW5 565 aaPredicted RBP21.71■■□□□ 1.07
CCDC78-206ENST00000463539 SCN4AP35499 1836 aa21.71■■□□□ 1.07
CCDC78-206ENST00000463539 WNT7AO00755 349 aa21.71■■□□□ 1.07
CCDC78-206ENST00000463539 MAP3K9P80192 1104 aa21.71■■□□□ 1.07
CCDC78-206ENST00000463539 ZNF174Q15697 407 aa21.71■■□□□ 1.07
CCDC78-206ENST00000463539 INF2Q27J81 1249 aa21.71■■□□□ 1.07
CCDC78-206ENST00000463539 GOLPH3LQ9H4A5 285 aa21.71■■□□□ 1.07
CCDC78-206ENST00000463539 EMILIN3Q9NT22 766 aa21.71■■□□□ 1.07
CCDC78-206ENST00000463539 DDX19AQ9NUU7 478 aaKnown RBP21.71■■□□□ 1.07
CCDC78-206ENST00000463539 MORC2Q9Y6X9 1032 aaPredicted RBP21.71■■□□□ 1.07
CCDC78-206ENST00000463539 CUTAO60888 179 aa21.7■■□□□ 1.06
CCDC78-206ENST00000463539 NR1I2O75469 434 aa21.7■■□□□ 1.06
CCDC78-206ENST00000463539 VCAM1P19320 739 aa21.7■■□□□ 1.06
CCDC78-206ENST00000463539 IREB2P48200 963 aaKnown RBP21.7■■□□□ 1.06
CCDC78-206ENST00000463539 TRAF1Q13077 416 aa21.7■■□□□ 1.06
CCDC78-206ENST00000463539 DGKZQ13574 1117 aa21.7■■□□□ 1.06
CCDC78-206ENST00000463539 VGLL4Q14135 290 aa21.7■■□□□ 1.06
CCDC78-206ENST00000463539 USH1GQ495M9 461 aa21.7■■□□□ 1.06
CCDC78-206ENST00000463539 JAKMIP3Q5VZ66 844 aa21.7■■□□□ 1.06
CCDC78-206ENST00000463539 RANBP17Q9H2T7 1088 aaKnown RBP21.7■■□□□ 1.06
CCDC78-206ENST00000463539 FBXO28Q9NVF7 368 aa21.7■■□□□ 1.06
CCDC78-206ENST00000463539 WDR90Q96KV7 1748 aa21.7■■□□□ 1.06
CCDC78-206ENST00000463539 SYCE3A1L190 88 aa21.69■■□□□ 1.06
CCDC78-206ENST00000463539 ZNF445P59923 1031 aa21.69■■□□□ 1.06
CCDC78-206ENST00000463539 FAM160A1Q05DH4 1040 aa21.69■■□□□ 1.06
CCDC78-206ENST00000463539 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.69■■□□□ 1.06
CCDC78-206ENST00000463539 SLF1Q9BQI6 1058 aa21.69■■□□□ 1.06
CCDC78-206ENST00000463539 TANGO6Q9C0B7 1094 aa21.69■■□□□ 1.06
CCDC78-206ENST00000463539 TMEM260Q9NX78 707 aa21.69■■□□□ 1.06
CCDC78-206ENST00000463539 CSADQ9Y600 493 aa21.69■■□□□ 1.06
CCDC78-206ENST00000463539 CMA1P23946 247 aa21.69■■□□□ 1.06
CCDC78-206ENST00000463539 MCM7P33993 719 aa21.69■■□□□ 1.06
CCDC78-206ENST00000463539 SAMD1Q6SPF0 538 aaPredicted RBP21.69■■□□□ 1.06
CCDC78-206ENST00000463539 NUP62CLQ9H1M0 184 aa21.69■■□□□ 1.06
CCDC78-206ENST00000463539 FBXO2Q9UK22 296 aaPredicted RBP21.69■■□□□ 1.06
CCDC78-206ENST00000463539 SNCAIPQ9Y6H5 919 aa21.69■■□□□ 1.06
CCDC78-206ENST00000463539 LETM1O95202 739 aaPredicted RBP21.68■■□□□ 1.06
CCDC78-206ENST00000463539 PTPREP23469 700 aa21.68■■□□□ 1.06
CCDC78-206ENST00000463539 UBE2SQ16763 222 aa21.68■■□□□ 1.06
CCDC78-206ENST00000463539 CCDC174Q6PII3 467 aa21.68■■□□□ 1.06
CCDC78-206ENST00000463539 CLIC6Q96NY7 704 aa21.68■■□□□ 1.06
CCDC78-206ENST00000463539 CLEC11AQ9Y240 323 aa21.68■■□□□ 1.06
CCDC78-206ENST00000463539 SRPRBQ9Y5M8 271 aaKnown RBP21.68■■□□□ 1.06
CCDC78-206ENST00000463539 A0A1B0GVL5 298 aa21.67■■□□□ 1.06
CCDC78-206ENST00000463539 C19orf81C9J6K1 198 aa21.67■■□□□ 1.06
CCDC78-206ENST00000463539 CLK2P49760 499 aaKnown RBP21.67■■□□□ 1.06
CCDC78-206ENST00000463539 PTGDRQ13258 359 aa21.67■■□□□ 1.06
CCDC78-206ENST00000463539 PRPF38AQ8NAV1 312 aaKnown RBP21.67■■□□□ 1.06
CCDC78-206ENST00000463539 RPAP3Q9H6T3 665 aaPredicted RBP21.67■■□□□ 1.06
CCDC78-206ENST00000463539 HMGCS2P54868 508 aa21.66■■□□□ 1.06
CCDC78-206ENST00000463539 ATP2C1P98194 919 aaPredicted RBP21.66■■□□□ 1.06
CCDC78-206ENST00000463539 SHC4Q6S5L8 630 aa21.66■■□□□ 1.06
CCDC78-206ENST00000463539 NEK8Q86SG6 692 aa21.66■■□□□ 1.06
CCDC78-206ENST00000463539 ENGASEQ8NFI3 743 aa21.66■■□□□ 1.06
CCDC78-206ENST00000463539 TBCKQ8TEA7 893 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms