RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 DNM1LO00429 736 aa15.37■□□□□ 0.05
HDAC1-203ENST00000463172 IGHA2P01877 340 aa15.37■□□□□ 0.05
HDAC1-203ENST00000463172 RARBP10826 455 aa15.37■□□□□ 0.05
HDAC1-203ENST00000463172 SYDE2Q5VT97 1194 aa15.37■□□□□ 0.05
HDAC1-203ENST00000463172 CCDC174Q6PII3 467 aa15.37■□□□□ 0.05
HDAC1-203ENST00000463172 BTNL9Q6UXG8 535 aa15.37■□□□□ 0.05
HDAC1-203ENST00000463172 KIAA1211Q6ZU35 1233 aa15.37■□□□□ 0.05
HDAC1-203ENST00000463172 ZSCAN10Q96SZ4 725 aaPredicted RBP15.37■□□□□ 0.05
HDAC1-203ENST00000463172 CCPG1Q9ULG6 757 aa15.37■□□□□ 0.05
HDAC1-203ENST00000463172 B4E1Z4 1266 aa15.36■□□□□ 0.05
HDAC1-203ENST00000463172 POTEB2H3BUK9 544 aa15.36■□□□□ 0.05
HDAC1-203ENST00000463172 ICAM1P05362 532 aa15.36■□□□□ 0.05
HDAC1-203ENST00000463172 PDHBP11177 359 aa15.36■□□□□ 0.05
HDAC1-203ENST00000463172 ALAS1P13196 640 aa15.36■□□□□ 0.05
HDAC1-203ENST00000463172 AKR1A1P14550 325 aa15.36■□□□□ 0.05
HDAC1-203ENST00000463172 TRPV1Q8NER1 839 aa15.36■□□□□ 0.05
HDAC1-203ENST00000463172 TRERF1Q96PN7 1200 aa15.36■□□□□ 0.05
HDAC1-203ENST00000463172 GPCPD1Q9NPB8 672 aa15.36■□□□□ 0.05
HDAC1-203ENST00000463172 SMCHD1A6NHR9 2005 aa15.35■□□□□ 0.05
HDAC1-203ENST00000463172 DNAJC25-GNG10A0A024R161 153 aa15.35■□□□□ 0.05
HDAC1-203ENST00000463172 ERICH2A1L162 156 aa15.35■□□□□ 0.05
HDAC1-203ENST00000463172 MYCNP04198 464 aaPredicted RBP15.35■□□□□ 0.05
HDAC1-203ENST00000463172 ZNF543Q08ER8 600 aa15.35■□□□□ 0.05
HDAC1-203ENST00000463172 SART3Q15020 963 aaKnown RBP15.35■□□□□ 0.05
HDAC1-203ENST00000463172 MAMDC4Q6UXC1 1216 aa15.35■□□□□ 0.05
HDAC1-203ENST00000463172 RALYLQ86SE5 291 aaKnown RBP15.35■□□□□ 0.05
HDAC1-203ENST00000463172 RNF180Q86T96 592 aa15.35■□□□□ 0.05
HDAC1-203ENST00000463172 PNMA1Q8ND90 353 aa15.35■□□□□ 0.05
HDAC1-203ENST00000463172 AGBL1Q96MI9 1066 aa15.35■□□□□ 0.05
HDAC1-203ENST00000463172 ZKSCAN3Q9BRR0 538 aa15.35■□□□□ 0.05
HDAC1-203ENST00000463172 RANBP17Q9H2T7 1088 aaKnown RBP15.35■□□□□ 0.05
HDAC1-203ENST00000463172 FAM184BQ9ULE4 1060 aa15.35■□□□□ 0.05
HDAC1-203ENST00000463172 FRMPD2Q68DX3 1309 aaPredicted RBP15.35■□□□□ 0.05
HDAC1-203ENST00000463172 ASB14A6NK59 587 aa15.34■□□□□ 0.05
HDAC1-203ENST00000463172 SGSM2O43147 1006 aa15.34■□□□□ 0.05
HDAC1-203ENST00000463172 NEFLP07196 543 aa15.34■□□□□ 0.05
HDAC1-203ENST00000463172 COL6A1P12109 1028 aa15.34■□□□□ 0.05
HDAC1-203ENST00000463172 SLC16A2P36021 539 aa15.34■□□□□ 0.05
HDAC1-203ENST00000463172 MNX1P50219 401 aaPredicted RBP15.34■□□□□ 0.05
HDAC1-203ENST00000463172 PRAMEF19Q5SWL8 479 aa15.34■□□□□ 0.05
HDAC1-203ENST00000463172 IFIT1BQ5T764 474 aaKnown RBP15.34■□□□□ 0.05
HDAC1-203ENST00000463172 CASC1Q6TDU7 716 aa15.34■□□□□ 0.05
HDAC1-203ENST00000463172 C7orf61Q8IZ16 206 aa15.34■□□□□ 0.05
HDAC1-203ENST00000463172 ANKS1AQ92625 1134 aa15.34■□□□□ 0.05
HDAC1-203ENST00000463172 MPHOSPH6Q99547 160 aaKnown RBP15.34■□□□□ 0.05
HDAC1-203ENST00000463172 SENP6Q9GZR1 1112 aaPredicted RBP15.34■□□□□ 0.05
HDAC1-203ENST00000463172 ABHD16BQ9H3Z7 469 aa15.34■□□□□ 0.05
HDAC1-203ENST00000463172 XPNPEP3Q9NQH7 507 aa15.34■□□□□ 0.05
HDAC1-203ENST00000463172 ZSWIM5Q9P217 1185 aa15.34■□□□□ 0.05
HDAC1-203ENST00000463172 ZHX1Q9UKY1 873 aaPredicted RBP15.34■□□□□ 0.05
HDAC1-203ENST00000463172 ALPK3Q96L96 1907 aa15.34■□□□□ 0.05
HDAC1-203ENST00000463172 ZNF536O15090 1300 aa15.34■□□□□ 0.05
HDAC1-203ENST00000463172 TNKSO95271 1327 aa15.34■□□□□ 0.05
HDAC1-203ENST00000463172 SNHG28P0DPA3 235 aa15.33■□□□□ 0.04
HDAC1-203ENST00000463172 ASPRV1Q53RT3 343 aa15.33■□□□□ 0.04
HDAC1-203ENST00000463172 TTBK2Q6IQ55 1244 aa15.33■□□□□ 0.04
HDAC1-203ENST00000463172 SPC25Q9HBM1 224 aa15.33■□□□□ 0.04
HDAC1-203ENST00000463172 A1CFQ9NQ94 594 aaKnown RBP15.33■□□□□ 0.04
HDAC1-203ENST00000463172 ADD3Q9UEY8 706 aaKnown RBP15.33■□□□□ 0.04
HDAC1-203ENST00000463172 MYH6P13533 1939 aa15.33■□□□□ 0.04
HDAC1-203ENST00000463172 MCM3APO60318 1980 aa15.33■□□□□ 0.04
HDAC1-203ENST00000463172 PARP1P09874 1014 aaKnown RBP15.32■□□□□ 0.04
HDAC1-203ENST00000463172 HABP4Q5JVS0 413 aaKnown RBP15.32■□□□□ 0.04
HDAC1-203ENST00000463172 GJC2Q5T442 439 aaPredicted RBP15.32■□□□□ 0.04
HDAC1-203ENST00000463172 ANO1Q5XXA6 986 aa15.32■□□□□ 0.04
HDAC1-203ENST00000463172 CHRDL2Q6WN34 429 aa15.32■□□□□ 0.04
HDAC1-203ENST00000463172 NSMFQ6X4W1 530 aa15.32■□□□□ 0.04
HDAC1-203ENST00000463172 ENAHQ8N8S7 591 aaPredicted RBP15.32■□□□□ 0.04
HDAC1-203ENST00000463172 NCOA7Q8NI08 942 aa15.32■□□□□ 0.04
HDAC1-203ENST00000463172 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.32■□□□□ 0.04
HDAC1-203ENST00000463172 PRKAG2Q9UGJ0 569 aa15.32■□□□□ 0.04
HDAC1-203ENST00000463172 WDR19Q8NEZ3 1342 aa15.32■□□□□ 0.04
HDAC1-203ENST00000463172 LOC102724159A0A0B4J2E5 919 aa15.31■□□□□ 0.04
HDAC1-203ENST00000463172 B4DLN1 442 aa15.31■□□□□ 0.04
HDAC1-203ENST00000463172 DHX16O60231 1041 aaKnown RBP15.31■□□□□ 0.04
HDAC1-203ENST00000463172 CYP21A2P08686 494 aa15.31■□□□□ 0.04
HDAC1-203ENST00000463172 ZNF865P0CJ78 1059 aaPredicted RBP15.31■□□□□ 0.04
HDAC1-203ENST00000463172 MRPL12P52815 198 aaKnown RBP15.31■□□□□ 0.04
HDAC1-203ENST00000463172 SNAP25P60880 206 aa15.31■□□□□ 0.04
HDAC1-203ENST00000463172 ACVR2BQ13705 512 aa15.31■□□□□ 0.04
HDAC1-203ENST00000463172 PWP2Q15269 919 aaKnown RBP15.31■□□□□ 0.04
HDAC1-203ENST00000463172 LRRC41Q15345 812 aa15.31■□□□□ 0.04
HDAC1-203ENST00000463172 BMP2KLQ5H9B9 411 aa15.31■□□□□ 0.04
HDAC1-203ENST00000463172 ARMCX2Q7L311 632 aa15.31■□□□□ 0.04
HDAC1-203ENST00000463172 RASGRP2Q7LDG7 609 aa15.31■□□□□ 0.04
HDAC1-203ENST00000463172 FAM133AQ8N9E0 248 aa15.31■□□□□ 0.04
HDAC1-203ENST00000463172 CCDC136Q96JN2 1154 aa15.31■□□□□ 0.04
HDAC1-203ENST00000463172 IL25Q9H293 177 aa15.31■□□□□ 0.04
HDAC1-203ENST00000463172 CYP39A1Q9NYL5 469 aa15.31■□□□□ 0.04
HDAC1-203ENST00000463172 COLQQ9Y215 455 aaPredicted RBP15.31■□□□□ 0.04
HDAC1-203ENST00000463172 TRIOBPQ9H2D6 2365 aa15.31■□□□□ 0.04
HDAC1-203ENST00000463172 SNAI1O95863 264 aaPredicted RBP15.3■□□□□ 0.04
HDAC1-203ENST00000463172 PTH1RQ03431 593 aa15.3■□□□□ 0.04
HDAC1-203ENST00000463172 TRAF1Q13077 416 aa15.3■□□□□ 0.04
HDAC1-203ENST00000463172 CCDC144CPQ8IYA2 1237 aa15.3■□□□□ 0.04
HDAC1-203ENST00000463172 MAP4K1Q92918 833 aa15.3■□□□□ 0.04
HDAC1-203ENST00000463172 MAF1Q9H063 256 aa15.3■□□□□ 0.04
HDAC1-203ENST00000463172 A0A1W2PPC1 479 aa15.29■□□□□ 0.04
HDAC1-203ENST00000463172 PTPDC1A2A3K4 754 aa15.29■□□□□ 0.04
HDAC1-203ENST00000463172 IFIT3O14879 490 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms