RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 MYO1HQ8N1T3 1032 aa5.08□□□□□ -1.6
GPNMB-205ENST00000463011 AGGF1Q8N302 714 aaeCLIP5.08□□□□□ -1.6
GPNMB-205ENST00000463011 PI4K2BQ8TCG2 481 aa5.08□□□□□ -1.6
GPNMB-205ENST00000463011 MORC4Q8TE76 937 aa5.08□□□□□ -1.6
GPNMB-205ENST00000463011 COG1Q8WTW3 980 aa5.08□□□□□ -1.6
GPNMB-205ENST00000463011 WNK4Q96J92 1243 aa5.08□□□□□ -1.6
GPNMB-205ENST00000463011 FBXL18Q96ME1 805 aa5.08□□□□□ -1.6
GPNMB-205ENST00000463011 TTC1Q99614 292 aa5.08□□□□□ -1.6
GPNMB-205ENST00000463011 IFT22Q9H7X7 185 aa5.08□□□□□ -1.6
GPNMB-205ENST00000463011 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.08□□□□□ -1.6
GPNMB-205ENST00000463011 ERBB4Q15303 1308 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 SLITRK5O94991 958 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 CPP00450 1065 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 PYGMP11217 842 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 ATF3P18847 181 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 RAB6AP20340 208 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 GNALP38405 381 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 ETV3P41162 512 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 SCNN1BP51168 640 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 AMPD2Q01433 879 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 GRB10Q13322 594 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 SLC35F1Q5T1Q4 408 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 DENND5AQ6IQ26 1287 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 MAMDC2Q7Z304 686 aaPredicted RBP5.07□□□□□ -1.6
GPNMB-205ENST00000463011 ZBTB46Q86UZ6 589 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 NXPE1Q8N323 547 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 CNTD1Q8N815 330 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 OR2W6PQ8NHA6 318 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 RNF141Q8WVD5 230 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 RELTQ969Z4 430 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 HOOK2Q96ED9 719 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 C1orf159Q96HA4 380 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 DSCC1Q9BVC3 393 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 ASPNQ9BXN1 380 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 PUS7LQ9H0K6 701 aaKnown RBP5.07□□□□□ -1.6
GPNMB-205ENST00000463011 RRAGCQ9HB90 399 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 CYP26B1Q9NR63 512 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 TRHDEQ9UKU6 1024 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 MINPP1Q9UNW1 487 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 DAGLAQ9Y4D2 1042 aa5.07□□□□□ -1.6
GPNMB-205ENST00000463011 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.06□□□□□ -1.6
GPNMB-205ENST00000463011 ZNF891A8MT65 544 aaPredicted RBP5.06□□□□□ -1.6
GPNMB-205ENST00000463011 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.06□□□□□ -1.6
GPNMB-205ENST00000463011 B4E1Z4 1266 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 FAM229AH3BQW9 127 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 M0R2C6 588 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 MEIS1O00470 390 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 AQP7O14520 342 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 ZEB2O60315 1214 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 CAND2O75155 1236 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 APPP05067 770 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 SCG5P05408 212 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 BPIP17213 487 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 KCNA6P17658 529 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 DGKGP49619 791 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 USP11P51784 963 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 GUCY1A3Q02108 690 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 CYP4F3Q08477 520 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 SCRN1Q12765 414 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 BIRC2Q13490 618 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 ZCCHC8Q6NZY4 707 aaKnown RBP5.06□□□□□ -1.6
GPNMB-205ENST00000463011 IGF2-ASQ6U949 168 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 LYPD4Q6UWN0 246 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.06□□□□□ -1.6
GPNMB-205ENST00000463011 TMC3Q7Z5M5 1100 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 PASD1Q8IV76 773 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 ZNF526Q8TF50 670 aaPredicted RBP5.06□□□□□ -1.6
GPNMB-205ENST00000463011 DCAF4Q8WV16 495 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 MRPL18Q9H0U6 180 aaKnown RBP5.06□□□□□ -1.6
GPNMB-205ENST00000463011 ACSS3Q9H6R3 686 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 SAMD15Q9P1V8 674 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 NOB1Q9ULX3 412 aaKnown RBP5.06□□□□□ -1.6
GPNMB-205ENST00000463011 SF3B6Q9Y3B4 125 aaKnown RBP5.06□□□□□ -1.6
GPNMB-205ENST00000463011 PCDHA8Q9Y5H6 950 aa5.06□□□□□ -1.6
GPNMB-205ENST00000463011 H0Y8X5 98 aa5.05□□□□□ -1.6
GPNMB-205ENST00000463011 GABRDO14764 452 aa5.05□□□□□ -1.6
GPNMB-205ENST00000463011 ALX3O95076 343 aa5.05□□□□□ -1.6
GPNMB-205ENST00000463011 APBA3O96018 575 aa5.05□□□□□ -1.6
GPNMB-205ENST00000463011 CELA2BP08218 269 aaPredicted RBP5.05□□□□□ -1.6
GPNMB-205ENST00000463011 NFICP08651 508 aa5.05□□□□□ -1.6
GPNMB-205ENST00000463011 HOXB4P17483 251 aaPredicted RBP5.05□□□□□ -1.6
GPNMB-205ENST00000463011 ITIH2P19823 946 aa5.05□□□□□ -1.6
GPNMB-205ENST00000463011 PIN1Q13526 163 aaPredicted RBP5.05□□□□□ -1.6
GPNMB-205ENST00000463011 SART3Q15020 963 aaKnown RBP5.05□□□□□ -1.6
GPNMB-205ENST00000463011 ANKRD34AQ69YU3 496 aa5.05□□□□□ -1.6
GPNMB-205ENST00000463011 STYK1Q6J9G0 422 aa5.05□□□□□ -1.6
GPNMB-205ENST00000463011 CDPF1Q6NVV7 123 aa5.05□□□□□ -1.6
GPNMB-205ENST00000463011 ABHD17CQ6PCB6 329 aa5.05□□□□□ -1.6
GPNMB-205ENST00000463011 DDX53Q86TM3 631 aaKnown RBP5.05□□□□□ -1.6
GPNMB-205ENST00000463011 KREMEN2Q8NCW0 462 aa5.05□□□□□ -1.6
GPNMB-205ENST00000463011 TTC8Q8TAM2 541 aa5.05□□□□□ -1.6
GPNMB-205ENST00000463011 CHMP4CQ96CF2 233 aa5.05□□□□□ -1.6
GPNMB-205ENST00000463011 TRIM11Q96F44 468 aa5.05□□□□□ -1.6
GPNMB-205ENST00000463011 RPS6KC1Q96S38 1066 aa5.05□□□□□ -1.6
GPNMB-205ENST00000463011 PLVAPQ9BX97 442 aa5.05□□□□□ -1.6
GPNMB-205ENST00000463011 RTFDC1Q9BY42 306 aaPredicted RBP5.05□□□□□ -1.6
GPNMB-205ENST00000463011 CDH19Q9H159 772 aa5.05□□□□□ -1.6
GPNMB-205ENST00000463011 PRDM10Q9NQV6 1147 aa5.05□□□□□ -1.6
GPNMB-205ENST00000463011 TNKSO95271 1327 aa5.04□□□□□ -1.6
GPNMB-205ENST00000463011 CNTNAP4Q9C0A0 1308 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms