RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 KRBA2Q6ZNG9 492 aa16.51■□□□□ 0.23
HDAC6-213ENST00000462730 FERMT2Q96AC1 680 aa16.51■□□□□ 0.23
HDAC6-213ENST00000462730 ASTN2O75129 1339 aaPredicted RBP16.51■□□□□ 0.23
HDAC6-213ENST00000462730 MCM7P33993 719 aa16.5■□□□□ 0.23
HDAC6-213ENST00000462730 PTGDRQ13258 359 aa16.5■□□□□ 0.23
HDAC6-213ENST00000462730 RASA3Q14644 834 aa16.5■□□□□ 0.23
HDAC6-213ENST00000462730 LONRF3Q496Y0 759 aa16.5■□□□□ 0.23
HDAC6-213ENST00000462730 MIGA2Q7L4E1 593 aa16.5■□□□□ 0.23
HDAC6-213ENST00000462730 CEP57L1Q8IYX8 460 aa16.5■□□□□ 0.23
HDAC6-213ENST00000462730 CNNM3Q8NE01 707 aa16.5■□□□□ 0.23
HDAC6-213ENST00000462730 MKL1Q969V6 931 aa16.5■□□□□ 0.23
HDAC6-213ENST00000462730 ZMYND12Q9H0C1 365 aa16.5■□□□□ 0.23
HDAC6-213ENST00000462730 BIN1O00499 593 aa16.49■□□□□ 0.23
HDAC6-213ENST00000462730 TBC1D12O60347 775 aa16.49■□□□□ 0.23
HDAC6-213ENST00000462730 YBX3P16989 372 aaKnown RBP eCLIP16.49■□□□□ 0.23
HDAC6-213ENST00000462730 IQCB1Q15051 598 aa16.49■□□□□ 0.23
HDAC6-213ENST00000462730 SIAH1Q8IUQ4 282 aa16.49■□□□□ 0.23
HDAC6-213ENST00000462730 GPC2Q8N158 579 aa16.49■□□□□ 0.23
HDAC6-213ENST00000462730 C6orf50Q9HD87 102 aa16.49■□□□□ 0.23
HDAC6-213ENST00000462730 HACL1Q9UJ83 578 aa16.49■□□□□ 0.23
HDAC6-213ENST00000462730 SMCO2A6NFE2 343 aa16.49■□□□□ 0.23
HDAC6-213ENST00000462730 hCG_1984214I3L0E3 225 aa16.49■□□□□ 0.23
HDAC6-213ENST00000462730 POLR2DO15514 142 aaKnown RBP16.49■□□□□ 0.23
HDAC6-213ENST00000462730 RAD21O60216 631 aa16.49■□□□□ 0.23
HDAC6-213ENST00000462730 PTMAP06454 111 aaKnown RBP16.49■□□□□ 0.23
HDAC6-213ENST00000462730 PNOCQ13519 176 aa16.49■□□□□ 0.23
HDAC6-213ENST00000462730 GPATCH4Q5T3I0 446 aaKnown RBP16.49■□□□□ 0.23
HDAC6-213ENST00000462730 TTBK2Q6IQ55 1244 aa16.49■□□□□ 0.23
HDAC6-213ENST00000462730 USP49Q70CQ1 688 aa16.49■□□□□ 0.23
HDAC6-213ENST00000462730 ZNF713Q8N859 430 aaPredicted RBP16.49■□□□□ 0.23
HDAC6-213ENST00000462730 H7C1D1 291 aa16.48■□□□□ 0.23
HDAC6-213ENST00000462730 NLRP12P59046 1061 aa16.48■□□□□ 0.23
HDAC6-213ENST00000462730 INF2Q27J81 1249 aa16.48■□□□□ 0.23
HDAC6-213ENST00000462730 KCTD1Q719H9 257 aa16.48■□□□□ 0.23
HDAC6-213ENST00000462730 TEPSINQ96N21 525 aa16.48■□□□□ 0.23
HDAC6-213ENST00000462730 GPRC5DQ9NZD1 345 aa16.48■□□□□ 0.23
HDAC6-213ENST00000462730 SERTAD1Q9UHV2 236 aa16.48■□□□□ 0.23
HDAC6-213ENST00000462730 ZBTB21Q9ULJ3 1066 aa16.48■□□□□ 0.23
HDAC6-213ENST00000462730 ATAD5Q96QE3 1844 aa16.48■□□□□ 0.23
HDAC6-213ENST00000462730 VWA3AA6NCI4 1184 aa16.47■□□□□ 0.23
HDAC6-213ENST00000462730 GNA11P29992 359 aa16.47■□□□□ 0.23
HDAC6-213ENST00000462730 DPCR1Q3MIW9 517 aa16.47■□□□□ 0.23
HDAC6-213ENST00000462730 KRT25Q7Z3Z0 450 aa16.47■□□□□ 0.23
HDAC6-213ENST00000462730 ADGRF4Q8IZF3 695 aa16.47■□□□□ 0.23
HDAC6-213ENST00000462730 PDILTQ8N807 584 aa16.47■□□□□ 0.23
HDAC6-213ENST00000462730 NAT10Q9H0A0 1025 aaKnown RBP16.47■□□□□ 0.23
HDAC6-213ENST00000462730 JMJD4Q9H9V9 463 aa16.47■□□□□ 0.23
HDAC6-213ENST00000462730 TUBE1Q9UJT0 475 aa16.47■□□□□ 0.23
HDAC6-213ENST00000462730 UQCRHLA0A096LP55 91 aa16.47■□□□□ 0.23
HDAC6-213ENST00000462730 ESYT2A0FGR8 921 aa16.47■□□□□ 0.23
HDAC6-213ENST00000462730 GOLGA6L19H0YKK7 550 aa16.47■□□□□ 0.23
HDAC6-213ENST00000462730 UQCRHP07919 91 aa16.47■□□□□ 0.23
HDAC6-213ENST00000462730 SLC16A2P36021 539 aa16.47■□□□□ 0.23
HDAC6-213ENST00000462730 SLC1A4P43007 532 aa16.47■□□□□ 0.23
HDAC6-213ENST00000462730 SLFN13Q68D06 897 aa16.47■□□□□ 0.23
HDAC6-213ENST00000462730 TRPM4Q8TD43 1214 aa16.47■□□□□ 0.23
HDAC6-213ENST00000462730 DCAF4Q8WV16 495 aa16.47■□□□□ 0.23
HDAC6-213ENST00000462730 SYMPKQ92797 1274 aaKnown RBP16.47■□□□□ 0.23
HDAC6-213ENST00000462730 COA7Q96BR5 231 aa16.47■□□□□ 0.23
HDAC6-213ENST00000462730 EPSTI1Q96J88 318 aa16.47■□□□□ 0.23
HDAC6-213ENST00000462730 RNF181Q9P0P0 153 aa16.47■□□□□ 0.23
HDAC6-213ENST00000462730 HOOK1Q9UJC3 728 aaKnown RBP16.47■□□□□ 0.23
HDAC6-213ENST00000462730 PNMA6FA0A0J9YX94 578 aa16.46■□□□□ 0.23
HDAC6-213ENST00000462730 BECN2A8MW95 431 aa16.46■□□□□ 0.23
HDAC6-213ENST00000462730 FOXN1O15353 648 aa16.46■□□□□ 0.23
HDAC6-213ENST00000462730 MAP3K10Q02779 954 aa16.46■□□□□ 0.23
HDAC6-213ENST00000462730 DHX40Q8IX18 779 aaKnown RBP16.46■□□□□ 0.23
HDAC6-213ENST00000462730 ELOA2Q8IYF1 753 aaPredicted RBP16.46■□□□□ 0.23
HDAC6-213ENST00000462730 AOPEPQ8N6M6 819 aa16.46■□□□□ 0.23
HDAC6-213ENST00000462730 GMCL1P1Q8NEA9 526 aa16.46■□□□□ 0.23
HDAC6-213ENST00000462730 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.46■□□□□ 0.23
HDAC6-213ENST00000462730 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.46■□□□□ 0.23
HDAC6-213ENST00000462730 A0A1W2PRG0 241 aa16.46■□□□□ 0.22
HDAC6-213ENST00000462730 F5H6K3 240 aa16.46■□□□□ 0.22
HDAC6-213ENST00000462730 ACTN4O43707 911 aaKnown RBP16.46■□□□□ 0.22
HDAC6-213ENST00000462730 ADCY7P51828 1080 aa16.46■□□□□ 0.22
HDAC6-213ENST00000462730 KLRC3Q07444 240 aa16.46■□□□□ 0.22
HDAC6-213ENST00000462730 NONOQ15233 471 aaKnown RBP eCLIP16.46■□□□□ 0.22
HDAC6-213ENST00000462730 C4orf32Q8N8J7 132 aa16.46■□□□□ 0.22
HDAC6-213ENST00000462730 DEFB129Q9H1M3 183 aa16.46■□□□□ 0.22
HDAC6-213ENST00000462730 A0A087X0B3 334 aa16.45■□□□□ 0.22
HDAC6-213ENST00000462730 USP17L10C9JJH3 530 aa16.45■□□□□ 0.22
HDAC6-213ENST00000462730 NDUFB10O96000 172 aa16.45■□□□□ 0.22
HDAC6-213ENST00000462730 CAP2P40123 477 aa16.45■□□□□ 0.22
HDAC6-213ENST00000462730 ECE1P42892 770 aa16.45■□□□□ 0.22
HDAC6-213ENST00000462730 MDM2Q00987 491 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-213ENST00000462730 POSTNQ15063 836 aa16.45■□□□□ 0.22
HDAC6-213ENST00000462730 IL17AQ16552 155 aa16.45■□□□□ 0.22
HDAC6-213ENST00000462730 ANGEL2Q5VTE6 544 aaKnown RBP16.45■□□□□ 0.22
HDAC6-213ENST00000462730 ISM2Q6H9L7 571 aa16.45■□□□□ 0.22
HDAC6-213ENST00000462730 REXO1Q8N1G1 1221 aaKnown RBP16.45■□□□□ 0.22
HDAC6-213ENST00000462730 DHX58Q96C10 678 aa16.45■□□□□ 0.22
HDAC6-213ENST00000462730 ARHGEF10LQ9HCE6 1279 aa16.45■□□□□ 0.22
HDAC6-213ENST00000462730 PRR29P0C7W0 189 aa16.44■□□□□ 0.22
HDAC6-213ENST00000462730 RBM10P98175 930 aaKnown RBP16.44■□□□□ 0.22
HDAC6-213ENST00000462730 JAKMIP3Q5VZ66 844 aa16.44■□□□□ 0.22
HDAC6-213ENST00000462730 ARL6IP4Q66PJ3 421 aaKnown RBP16.44■□□□□ 0.22
HDAC6-213ENST00000462730 PPP1R18Q6NYC8 613 aa16.44■□□□□ 0.22
HDAC6-213ENST00000462730 GRAMD1CQ8IYS0 662 aa16.44■□□□□ 0.22
HDAC6-213ENST00000462730 BIN2Q9UBW5 565 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms