RNA–Protein interactions for RNA: ENST00000462602.6

SH3BP4-208, Transcript of SH3 domain binding protein 4, humanhuman

TSL 5

Gene SH3BP4, Length 257 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4-208ENST00000462602 QRICH1Q2TAL8 776 aa10.85□□□□□ -0.67
SH3BP4-208ENST00000462602 LBX2Q6XYB7 198 aa10.85□□□□□ -0.67
SH3BP4-208ENST00000462602 RGS22Q8NE09 1264 aa10.85□□□□□ -0.67
SH3BP4-208ENST00000462602 CCDC12Q8WUD4 166 aaPredicted RBP10.85□□□□□ -0.67
SH3BP4-208ENST00000462602 PIBF1Q8WXW3 757 aa10.85□□□□□ -0.67
SH3BP4-208ENST00000462602 ATG4CQ96DT6 458 aa10.85□□□□□ -0.67
SH3BP4-208ENST00000462602 PARK7Q99497 189 aaKnown RBP10.85□□□□□ -0.67
SH3BP4-208ENST00000462602 P2RX7Q99572 595 aaKnown RBP10.85□□□□□ -0.67
SH3BP4-208ENST00000462602 ALG1Q9BT22 464 aa10.85□□□□□ -0.67
SH3BP4-208ENST00000462602 AMNQ9BXJ7 453 aa10.85□□□□□ -0.67
SH3BP4-208ENST00000462602 SLC38A10Q9HBR0 1119 aa10.85□□□□□ -0.67
SH3BP4-208ENST00000462602 SH3GLB2Q9NR46 395 aa10.85□□□□□ -0.67
SH3BP4-208ENST00000462602 ADAMTS5Q9UNA0 930 aa10.85□□□□□ -0.67
SH3BP4-208ENST00000462602 PTPRFP10586 1907 aa10.84□□□□□ -0.67
SH3BP4-208ENST00000462602 hCG_1642624A0A1W2PR95 340 aa10.84□□□□□ -0.67
SH3BP4-208ENST00000462602 SPDYE16A6NNV3 312 aaPredicted RBP10.84□□□□□ -0.67
SH3BP4-208ENST00000462602 ALDH1A1P00352 501 aa10.84□□□□□ -0.67
SH3BP4-208ENST00000462602 MAP2K2P36507 400 aa10.84□□□□□ -0.67
SH3BP4-208ENST00000462602 C1QTNF8P60827 252 aa10.84□□□□□ -0.67
SH3BP4-208ENST00000462602 HERVK_113P62684 666 aa10.84□□□□□ -0.67
SH3BP4-208ENST00000462602 KIF23Q02241 960 aaPredicted RBP10.84□□□□□ -0.67
SH3BP4-208ENST00000462602 PKN1Q16512 942 aa10.84□□□□□ -0.67
SH3BP4-208ENST00000462602 LARP1BQ659C4 914 aaKnown RBP10.84□□□□□ -0.67
SH3BP4-208ENST00000462602 FBXO11Q86XK2 927 aa10.84□□□□□ -0.67
SH3BP4-208ENST00000462602 IFNL1Q8IU54 200 aa10.84□□□□□ -0.67
SH3BP4-208ENST00000462602 FAM43AQ8N2R8 423 aa10.84□□□□□ -0.67
SH3BP4-208ENST00000462602 SMCR8Q8TEV9 937 aaPredicted RBP10.84□□□□□ -0.67
SH3BP4-208ENST00000462602 C8orf76Q96K31 380 aa10.84□□□□□ -0.67
SH3BP4-208ENST00000462602 PTPN18Q99952 460 aa10.84□□□□□ -0.67
SH3BP4-208ENST00000462602 BARHL2Q9NY43 387 aa10.84□□□□□ -0.67
SH3BP4-208ENST00000462602 LOC285556D6RIA3 1793 aa10.84□□□□□ -0.67
SH3BP4-208ENST00000462602 WDR33Q9C0J8 1336 aaKnown RBP10.84□□□□□ -0.67
SH3BP4-208ENST00000462602 BAZ2BQ9UIF8 2168 aaKnown RBP10.83□□□□□ -0.68
SH3BP4-208ENST00000462602 H3BQV1 296 aa10.83□□□□□ -0.68
SH3BP4-208ENST00000462602 ATP2A1O14983 1001 aa10.83□□□□□ -0.68
SH3BP4-208ENST00000462602 ICAM1P05362 532 aa10.83□□□□□ -0.68
SH3BP4-208ENST00000462602 HSPA6P17066 643 aa10.83□□□□□ -0.68
SH3BP4-208ENST00000462602 GCLCP48506 637 aaPredicted RBP10.83□□□□□ -0.68
SH3BP4-208ENST00000462602 SNAP25P60880 206 aa10.83□□□□□ -0.68
SH3BP4-208ENST00000462602 IFFO2Q5TF58 517 aa10.83□□□□□ -0.68
SH3BP4-208ENST00000462602 PPP1R18Q6NYC8 613 aa10.83□□□□□ -0.68
SH3BP4-208ENST00000462602 CCDC174Q6PII3 467 aa10.83□□□□□ -0.68
SH3BP4-208ENST00000462602 HEATR3Q7Z4Q2 680 aa10.83□□□□□ -0.68
SH3BP4-208ENST00000462602 CCDC148Q8NFR7 591 aa10.83□□□□□ -0.68
SH3BP4-208ENST00000462602 GLT8D2Q9H1C3 349 aa10.83□□□□□ -0.68
SH3BP4-208ENST00000462602 RABGAP1Q9Y3P9 1069 aa10.83□□□□□ -0.68
SH3BP4-208ENST00000462602 PCDHA1Q9Y5I3 950 aa10.83□□□□□ -0.68
SH3BP4-208ENST00000462602 ABCB11O95342 1321 aa10.83□□□□□ -0.68
SH3BP4-208ENST00000462602 IGF2BP3O00425 579 aaKnown RBP eCLIP10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 DTNBO60941 627 aa10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 CYP2C8P10632 490 aa10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 CALML3P27482 149 aa10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 COPB2P35606 906 aa10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 STAT3P40763 770 aa10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 VEGFBP49765 207 aa10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 NAPAP54920 295 aa10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 SAFBQ15424 915 aaKnown RBP eCLIP10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 TAF1CQ15572 869 aaPredicted RBP10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 TKFCQ3LXA3 575 aa10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 WWC2Q6AWC2 1192 aa10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 GALNT17Q6IS24 598 aa10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 TEX2Q8IWB9 1127 aa10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 CPXCR1Q8N123 301 aa10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 REPS2Q8NFH8 660 aa10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 TEX13BQ9BXU2 312 aa10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 ZFYVE28Q9HCC9 887 aa10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 RAVER2Q9HCJ3 691 aaKnown RBP10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 BRMS1Q9HCU9 246 aa10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 VPS54Q9P1Q0 977 aa10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 CCPG1Q9ULG6 757 aa10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 MRPL11Q9Y3B7 192 aaKnown RBP10.82□□□□□ -0.68
SH3BP4-208ENST00000462602 ESYT2A0FGR8 921 aa10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 STXBP3O00186 592 aa10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 PPP1R11O60927 126 aaPredicted RBP10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 AOC2O75106 756 aa10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 SLC25A27O95847 323 aa10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 GNA11P29992 359 aa10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 NLRP5P59047 1200 aa10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 CCNA1P78396 465 aa10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 NUCB2P80303 420 aa10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 PLS1Q14651 629 aa10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 TMEM132BQ14DG7 1078 aa10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 USH1GQ495M9 461 aa10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 SNRNP48Q6IEG0 339 aaKnown RBP10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 GPRC5AQ8NFJ5 357 aa10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 FBXO18Q8NFZ0 1043 aa10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 BICD2Q8TD16 824 aa10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 GPKOWQ92917 476 aaPredicted RBP eCLIP10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 COA7Q96BR5 231 aa10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 AIFM3Q96NN9 605 aa10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 PAGR1Q9BTK6 254 aa10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 MAF1Q9H063 256 aa10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 C6orf50Q9HD87 102 aa10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 ZNF214Q9UL59 606 aaPredicted RBP10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 CIZ1Q9ULV3 898 aaPredicted RBP10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 ZNF536O15090 1300 aa10.81□□□□□ -0.68
SH3BP4-208ENST00000462602 SMCO2A6NFE2 343 aa10.8□□□□□ -0.68
SH3BP4-208ENST00000462602 CA12O43570 354 aa10.8□□□□□ -0.68
SH3BP4-208ENST00000462602 STX6O43752 255 aa10.8□□□□□ -0.68
SH3BP4-208ENST00000462602 ALAS1P13196 640 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms