RNA–Protein interactions for RNA: ENST00000462438.1

RAE1-207, Transcript of ribonucleic acid export 1, humanhuman

TSL 2

Gene RAE1, Length 3,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-207ENST00000462438 USP17L13C9JLJ4 530 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 USP17L11C9JVI0 530 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 USP17L18D6R9N7 530 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 USP17L22D6RA61 530 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 USP17L17D6RBQ6 530 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 USP17L19D6RCP7 530 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 USP17L20D6RJB6 530 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 GHRHRQ02643 423 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 USP17L24Q0WX57 530 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 SAPCD2Q86UD0 394 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 ZNF710Q8N1W2 664 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 RRP36Q96EU6 259 aaKnown RBP13.89□□□□□ -0.19
RAE1-207ENST00000462438 LARP6Q9BRS8 491 aaKnown RBP13.89□□□□□ -0.19
RAE1-207ENST00000462438 ELP3Q9H9T3 547 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 CCDC173Q0VFZ6 552 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 SPRYD7Q5W111 196 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 DLK2Q6UY11 383 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 CATSPERGQ6ZRH7 1159 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 AGTPBP1Q9UPW5 1226 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 UBE2Q2LH0YL09 131 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 SLC10A3P09131 477 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 SCG2P13521 617 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 ATP2B2Q01814 1243 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 AKAP17AQ02040 695 aaKnown RBP13.88□□□□□ -0.19
RAE1-207ENST00000462438 MB21D1Q8N884 522 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 PRPF38AQ8NAV1 312 aaKnown RBP13.88□□□□□ -0.19
RAE1-207ENST00000462438 CCDC12Q8WUD4 166 aaPredicted RBP13.88□□□□□ -0.19
RAE1-207ENST00000462438 CLMNQ96JQ2 1002 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 JMJD4Q9H9V9 463 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 CHMP5Q9NZZ3 219 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 PPP1R9AQ9ULJ8 1098 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 TMEM88BA6NKF7 163 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 ZBTB5O15062 677 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 CETPP11597 493 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 XBP1P17861 261 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 CCDC96Q2M329 555 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 MCTP2Q6DN12 878 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 ANKRD23Q86SG2 305 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 RNF214Q8ND24 703 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 CCDC102AQ96A19 550 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 SLF1Q9BQI6 1058 aa13.88□□□□□ -0.19
RAE1-207ENST00000462438 COL11A1P12107 1806 aaPredicted RBP13.87□□□□□ -0.19
RAE1-207ENST00000462438 JAK2O60674 1132 aa13.87□□□□□ -0.19
RAE1-207ENST00000462438 RXRAP19793 462 aa13.87□□□□□ -0.19
RAE1-207ENST00000462438 INHBEP58166 350 aa13.87□□□□□ -0.19
RAE1-207ENST00000462438 RASAL3Q86YV0 1011 aa13.87□□□□□ -0.19
RAE1-207ENST00000462438 ADGRF4Q8IZF3 695 aa13.87□□□□□ -0.19
RAE1-207ENST00000462438 CCDC148Q8NFR7 591 aa13.87□□□□□ -0.19
RAE1-207ENST00000462438 WDR33Q9C0J8 1336 aaKnown RBP13.87□□□□□ -0.19
RAE1-207ENST00000462438 BRD1O95696 1058 aa13.87□□□□□ -0.19
RAE1-207ENST00000462438 GJA5P36382 358 aa13.87□□□□□ -0.19
RAE1-207ENST00000462438 FAM83BQ5T0W9 1011 aa13.87□□□□□ -0.19
RAE1-207ENST00000462438 SASS6Q6UVJ0 657 aa13.87□□□□□ -0.19
RAE1-207ENST00000462438 FAM184AQ8NB25 1140 aa13.87□□□□□ -0.19
RAE1-207ENST00000462438 FBXO18Q8NFZ0 1043 aa13.87□□□□□ -0.19
RAE1-207ENST00000462438 MS4A4AQ96JQ5 239 aa13.87□□□□□ -0.19
RAE1-207ENST00000462438 BARHL2Q9NY43 387 aa13.87□□□□□ -0.19
RAE1-207ENST00000462438 UTRNP46939 3433 aa13.87□□□□□ -0.19
RAE1-207ENST00000462438 RGMBQ6NW40 437 aa13.86□□□□□ -0.19
RAE1-207ENST00000462438 CLEC17AQ6ZS10 378 aa13.86□□□□□ -0.19
RAE1-207ENST00000462438 SLC26A6Q9BXS9 759 aa13.86□□□□□ -0.19
RAE1-207ENST00000462438 SEC63Q9UGP8 760 aaKnown RBP13.86□□□□□ -0.19
RAE1-207ENST00000462438 PRR12Q9ULL5 1215 aa13.86□□□□□ -0.19
RAE1-207ENST00000462438 MANSC4A6NHS7 340 aaPredicted RBP13.86□□□□□ -0.19
RAE1-207ENST00000462438 DSG3P32926 999 aa13.86□□□□□ -0.19
RAE1-207ENST00000462438 COPB2P35606 906 aa13.86□□□□□ -0.19
RAE1-207ENST00000462438 TKFCQ3LXA3 575 aa13.86□□□□□ -0.19
RAE1-207ENST00000462438 MOB2Q70IA6 237 aa13.86□□□□□ -0.19
RAE1-207ENST00000462438 CREBZFQ9NS37 354 aa13.86□□□□□ -0.19
RAE1-207ENST00000462438 MAP3K20Q9NYL2 800 aaKnown RBP13.86□□□□□ -0.19
RAE1-207ENST00000462438 ZNF236Q9UL36 1845 aa13.86□□□□□ -0.19
RAE1-207ENST00000462438 TMEM232C9JQI7 657 aa13.86□□□□□ -0.19
RAE1-207ENST00000462438 CALML3P27482 149 aa13.86□□□□□ -0.19
RAE1-207ENST00000462438 CCDC144CPQ8IYA2 1237 aa13.86□□□□□ -0.19
RAE1-207ENST00000462438 REPS2Q8NFH8 660 aa13.86□□□□□ -0.19
RAE1-207ENST00000462438 RPAP3Q9H6T3 665 aaPredicted RBP13.86□□□□□ -0.19
RAE1-207ENST00000462438 SLC38A10Q9HBR0 1119 aa13.86□□□□□ -0.19
RAE1-207ENST00000462438 HOXC10Q9NYD6 342 aa13.86□□□□□ -0.19
RAE1-207ENST00000462438 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.86□□□□□ -0.19
RAE1-207ENST00000462438 FZD1Q9UP38 647 aa13.86□□□□□ -0.19
RAE1-207ENST00000462438 RASSF10A6NK89 507 aa13.85□□□□□ -0.19
RAE1-207ENST00000462438 SYT1P21579 422 aa13.85□□□□□ -0.19
RAE1-207ENST00000462438 GPAT2Q6NUI2 795 aa13.85□□□□□ -0.19
RAE1-207ENST00000462438 GPATCH11Q8N954 259 aa13.85□□□□□ -0.19
RAE1-207ENST00000462438 OTUD5Q96G74 571 aa13.85□□□□□ -0.19
RAE1-207ENST00000462438 ALG1Q9BT22 464 aa13.85□□□□□ -0.19
RAE1-207ENST00000462438 PHF20Q9BVI0 1012 aa13.85□□□□□ -0.19
RAE1-207ENST00000462438 PNMA3Q9UL41 463 aa13.85□□□□□ -0.19
RAE1-207ENST00000462438 MORC2Q9Y6X9 1032 aaPredicted RBP13.85□□□□□ -0.19
RAE1-207ENST00000462438 FRMPD2Q68DX3 1309 aaPredicted RBP13.85□□□□□ -0.19
RAE1-207ENST00000462438 TRIM75PA6NK02 468 aa13.85□□□□□ -0.19
RAE1-207ENST00000462438 STX6O43752 255 aa13.85□□□□□ -0.19
RAE1-207ENST00000462438 HMGCS2P54868 508 aa13.85□□□□□ -0.19
RAE1-207ENST00000462438 HUNKP57058 714 aa13.85□□□□□ -0.19
RAE1-207ENST00000462438 COG2Q14746 738 aa13.85□□□□□ -0.19
RAE1-207ENST00000462438 KCTD1Q719H9 257 aa13.85□□□□□ -0.19
RAE1-207ENST00000462438 V9GY48 417 aaPredicted RBP13.85□□□□□ -0.19
RAE1-207ENST00000462438 ABCB11O95342 1321 aa13.85□□□□□ -0.19
RAE1-207ENST00000462438 PRKG1Q13976 671 aa13.84□□□□□ -0.19
RAE1-207ENST00000462438 PHKBQ93100 1093 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms