RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 TANGO6Q9C0B7 1094 aa6.98□□□□□ -1.29
COPS3-204ENST00000462236 FAM105AQ9NUU6 356 aa6.98□□□□□ -1.29
COPS3-204ENST00000462236 GDF11O95390 407 aa6.97□□□□□ -1.29
COPS3-204ENST00000462236 PGRP06401 933 aa6.97□□□□□ -1.29
COPS3-204ENST00000462236 CLCQ05315 142 aa6.97□□□□□ -1.29
COPS3-204ENST00000462236 SAFB2Q14151 953 aaKnown RBP eCLIP6.97□□□□□ -1.29
COPS3-204ENST00000462236 SLC6A19Q695T7 634 aa6.97□□□□□ -1.29
COPS3-204ENST00000462236 PTF1AQ7RTS3 328 aa6.97□□□□□ -1.29
COPS3-204ENST00000462236 MCATQ8IVS2 390 aaKnown RBP6.97□□□□□ -1.29
COPS3-204ENST00000462236 FAM20CQ8IXL6 584 aa6.97□□□□□ -1.29
COPS3-204ENST00000462236 MRPL41Q8IXM3 137 aaKnown RBP6.97□□□□□ -1.29
COPS3-204ENST00000462236 FERD3LQ96RJ6 166 aa6.97□□□□□ -1.29
COPS3-204ENST00000462236 GMIPQ9P107 970 aa6.97□□□□□ -1.29
COPS3-204ENST00000462236 CSADQ9Y600 493 aa6.97□□□□□ -1.29
COPS3-204ENST00000462236 SLIT3O75094 1523 aa6.96□□□□□ -1.29
COPS3-204ENST00000462236 CRB1P82279 1406 aa6.96□□□□□ -1.3
COPS3-204ENST00000462236 SSBP05455 408 aaKnown RBP eCLIP6.96□□□□□ -1.3
COPS3-204ENST00000462236 NEFMP07197 916 aa6.96□□□□□ -1.3
COPS3-204ENST00000462236 BMP3P12645 472 aa6.96□□□□□ -1.3
COPS3-204ENST00000462236 PLCG1P19174 1290 aa6.96□□□□□ -1.3
COPS3-204ENST00000462236 YARSP54577 528 aaKnown RBP6.96□□□□□ -1.3
COPS3-204ENST00000462236 EIF6P56537 245 aaKnown RBP6.96□□□□□ -1.3
COPS3-204ENST00000462236 GK5Q6ZS86 529 aa6.96□□□□□ -1.3
COPS3-204ENST00000462236 CLEC10AQ8IUN9 316 aa6.96□□□□□ -1.3
COPS3-204ENST00000462236 ARMC10Q8N2F6 343 aa6.96□□□□□ -1.3
COPS3-204ENST00000462236 TAB3Q8N5C8 712 aaPredicted RBP6.96□□□□□ -1.3
COPS3-204ENST00000462236 CPLX3Q8WVH0 158 aa6.96□□□□□ -1.3
COPS3-204ENST00000462236 ISL2Q96A47 359 aa6.96□□□□□ -1.3
COPS3-204ENST00000462236 CRBNQ96SW2 442 aa6.96□□□□□ -1.3
COPS3-204ENST00000462236 REV1Q9UBZ9 1251 aa6.96□□□□□ -1.3
COPS3-204ENST00000462236 TRPM1Q7Z4N2 1603 aa6.96□□□□□ -1.3
COPS3-204ENST00000462236 LY75O60449 1722 aa6.96□□□□□ -1.3
COPS3-204ENST00000462236 KIAA1210Q9ULL0 1709 aa6.96□□□□□ -1.3
COPS3-204ENST00000462236 PCNTO95613 3336 aa6.95□□□□□ -1.3
COPS3-204ENST00000462236 GRIN3BO60391 1043 aa6.95□□□□□ -1.3
COPS3-204ENST00000462236 RNGTTO60942 597 aaKnown RBP6.95□□□□□ -1.3
COPS3-204ENST00000462236 ZBTB7AO95365 584 aa6.95□□□□□ -1.3
COPS3-204ENST00000462236 MAP4P27816 1152 aaKnown RBP6.95□□□□□ -1.3
COPS3-204ENST00000462236 GIPRP48546 466 aa6.95□□□□□ -1.3
COPS3-204ENST00000462236 PLA2G4EQ3MJ16 856 aa6.95□□□□□ -1.3
COPS3-204ENST00000462236 SOGA3Q5TF21 947 aa6.95□□□□□ -1.3
COPS3-204ENST00000462236 INTS3Q68E01 1043 aaKnown RBP6.95□□□□□ -1.3
COPS3-204ENST00000462236 CDPF1Q6NVV7 123 aa6.95□□□□□ -1.3
COPS3-204ENST00000462236 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.95□□□□□ -1.3
COPS3-204ENST00000462236 SLFN12Q8IYM2 578 aa6.95□□□□□ -1.3
COPS3-204ENST00000462236 TMEM40Q8WWA1 233 aa6.95□□□□□ -1.3
COPS3-204ENST00000462236 UBXN4Q92575 508 aa6.95□□□□□ -1.3
COPS3-204ENST00000462236 SHDQ96IW2 340 aa6.95□□□□□ -1.3
COPS3-204ENST00000462236 TM9SF2Q99805 663 aa6.95□□□□□ -1.3
COPS3-204ENST00000462236 HIRIP3Q9BW71 556 aaPredicted RBP6.95□□□□□ -1.3
COPS3-204ENST00000462236 SEMA6CQ9H3T2 930 aa6.95□□□□□ -1.3
COPS3-204ENST00000462236 SSU72Q9NP77 194 aaKnown RBP6.95□□□□□ -1.3
COPS3-204ENST00000462236 USP35Q9P2H5 1018 aa6.95□□□□□ -1.3
COPS3-204ENST00000462236 PIK3C2AO00443 1686 aa6.95□□□□□ -1.3
COPS3-204ENST00000462236 LRIG2O94898 1065 aa6.94□□□□□ -1.3
COPS3-204ENST00000462236 HCLS1P14317 486 aaPredicted RBP6.94□□□□□ -1.3
COPS3-204ENST00000462236 CCNFP41002 786 aa6.94□□□□□ -1.3
COPS3-204ENST00000462236 SLC15A2Q16348 729 aa6.94□□□□□ -1.3
COPS3-204ENST00000462236 TNNI3KQ59H18 835 aa6.94□□□□□ -1.3
COPS3-204ENST00000462236 CDCP2Q5VXM1 449 aa6.94□□□□□ -1.3
COPS3-204ENST00000462236 PAOXQ6QHF9 649 aa6.94□□□□□ -1.3
COPS3-204ENST00000462236 SLC51AQ86UW1 340 aa6.94□□□□□ -1.3
COPS3-204ENST00000462236 C19orf47Q8N9M1 422 aaKnown RBP6.94□□□□□ -1.3
COPS3-204ENST00000462236 MFSD2AQ8NA29 543 aa6.94□□□□□ -1.3
COPS3-204ENST00000462236 NGDNQ8NEJ9 315 aaKnown RBP6.94□□□□□ -1.3
COPS3-204ENST00000462236 GIMAP7Q8NHV1 300 aa6.94□□□□□ -1.3
COPS3-204ENST00000462236 ACSF2Q96CM8 615 aaPredicted RBP6.94□□□□□ -1.3
COPS3-204ENST00000462236 TMEM87BQ96K49 555 aa6.94□□□□□ -1.3
COPS3-204ENST00000462236 FAM83CQ9BQN1 747 aa6.94□□□□□ -1.3
COPS3-204ENST00000462236 MTFR1LQ9H019 292 aa6.94□□□□□ -1.3
COPS3-204ENST00000462236 POGKQ9P215 609 aa6.94□□□□□ -1.3
COPS3-204ENST00000462236 TJP2Q9UDY2 1190 aa6.94□□□□□ -1.3
COPS3-204ENST00000462236 PPT2Q9UMR5 302 aa6.94□□□□□ -1.3
COPS3-204ENST00000462236 CORINQ9Y5Q5 1042 aa6.94□□□□□ -1.3
COPS3-204ENST00000462236 USP54Q70EL1 1684 aa6.93□□□□□ -1.3
COPS3-204ENST00000462236 TAF1LQ8IZX4 1826 aa6.93□□□□□ -1.3
COPS3-204ENST00000462236 FAM95CA0A1B0GW59 222 aa6.93□□□□□ -1.3
COPS3-204ENST00000462236 SLC22A31A6NKX4 558 aa6.93□□□□□ -1.3
COPS3-204ENST00000462236 CST3P01034 146 aaPredicted RBP6.93□□□□□ -1.3
COPS3-204ENST00000462236 RBL2Q08999 1139 aa6.93□□□□□ -1.3
COPS3-204ENST00000462236 SLBPQ14493 270 aaKnown RBP eCLIP6.93□□□□□ -1.3
COPS3-204ENST00000462236 TXNRD1Q16881 649 aa6.93□□□□□ -1.3
COPS3-204ENST00000462236 SGO2Q562F6 1265 aa6.93□□□□□ -1.3
COPS3-204ENST00000462236 SEZ6L2Q6UXD5 910 aa6.93□□□□□ -1.3
COPS3-204ENST00000462236 MARCH10Q8NA82 808 aaPredicted RBP6.93□□□□□ -1.3
COPS3-204ENST00000462236 FBLIM1Q8WUP2 373 aa6.93□□□□□ -1.3
COPS3-204ENST00000462236 MPHOSPH9Q99550 1183 aa6.93□□□□□ -1.3
COPS3-204ENST00000462236 FOXQ1Q9C009 403 aa6.93□□□□□ -1.3
COPS3-204ENST00000462236 CNNM2Q9H8M5 875 aa6.93□□□□□ -1.3
COPS3-204ENST00000462236 RAXQ9Y2V3 346 aa6.93□□□□□ -1.3
COPS3-204ENST00000462236 QRICH2Q9H0J4 1663 aa6.93□□□□□ -1.3
COPS3-204ENST00000462236 STK10O94804 968 aaKnown RBP6.92□□□□□ -1.3
COPS3-204ENST00000462236 NFICP08651 508 aa6.92□□□□□ -1.3
COPS3-204ENST00000462236 H2AFB1P0C5Y9 115 aa6.92□□□□□ -1.3
COPS3-204ENST00000462236 H2AFB2P0C5Z0 115 aa6.92□□□□□ -1.3
COPS3-204ENST00000462236 RAB6AP20340 208 aa6.92□□□□□ -1.3
COPS3-204ENST00000462236 CASP7P55210 303 aa6.92□□□□□ -1.3
COPS3-204ENST00000462236 EVA1CP58658 441 aa6.92□□□□□ -1.3
COPS3-204ENST00000462236 NBPF6Q5VWK0 638 aa6.92□□□□□ -1.3
COPS3-204ENST00000462236 BEND4Q6ZU67 534 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms