RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 MTMR14Q8NCE2 650 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 VCPKMTQ9H867 229 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 GINM1Q9NU53 330 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 SCAF8Q9UPN6 1271 aaKnown RBP4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 SMTNL1A8MU46 457 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 STXBP3O00186 592 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 CFBP00751 764 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 FOSP01100 380 aaPredicted RBP4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 OR52Z1P0C646 297 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 PTPREP23469 700 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 CAP2P40123 477 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 AFMP43652 599 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 DHX8Q14562 1220 aaKnown RBP4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 PKN1Q16512 942 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 CALCRLQ16602 461 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 UVSSAQ2YD98 709 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 KRT79Q5XKE5 535 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 CREBRFQ8IUR6 639 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 ERMNQ8TAM6 284 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 SYT17Q9BSW7 474 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 DNAJC25Q9H1X3 360 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 ZNF408Q9H9D4 720 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 PLIN4Q96Q06 1357 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 ESYT2A0FGR8 921 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 IQCA1LA6NCM1 817 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 LAD1O00515 517 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 SLURP2P0DP57 97 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 XRCC6P12956 609 aaKnown RBP eCLIP4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 TXKP42681 527 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 ZNF280AP59817 542 aaPredicted RBP4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 AMPD3Q01432 767 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 FUT2Q10981 343 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 SPP2Q13103 211 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 TATDN1Q6P1N9 297 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 SH3BP5LQ7L8J4 393 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 KRT26Q7Z3Y9 468 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 ACER1Q8TDN7 264 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 TBCKQ8TEA7 893 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 GMCL1Q96IK5 515 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 RBSNQ9H1K0 784 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 JMJD4Q9H9V9 463 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 ADARB2Q9NS39 739 aaKnown RBP4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 GPRC5DQ9NZD1 345 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 USP25Q9UHP3 1055 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 CCPG1Q9ULG6 757 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 SRPRBQ9Y5M8 271 aaKnown RBP4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 SLX4Q8IY92 1834 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 CACNA1SQ13698 1873 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 ZNF541Q9H0D2 1346 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 SNED1Q8TER0 1413 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 FAM205CA6NFA0 338 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 GCOM1H8Y6P7 765 aaPredicted RBP4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 CTNND1O60716 968 aaKnown RBP4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 DDNO94850 711 aaPredicted RBP4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 POLR2MP0CAP2 368 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 GCFC2P16383 781 aaKnown RBP4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 LONP1P36776 959 aaKnown RBP4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 PTGER2P43116 358 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 IREB2P48200 963 aaKnown RBP4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 PLS1Q14651 629 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 UBE2SQ16763 222 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 WDR78Q5VTH9 848 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 ISM2Q6H9L7 571 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 RASGRP2Q7LDG7 609 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 GMCL1P1Q8NEA9 526 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 LPAR1Q92633 364 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 ZMYND12Q9H0C1 365 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 CSRNP2Q9H175 543 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 RIOX1Q9H6W3 641 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 RMND1Q9NWS8 449 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 FEM1BQ9UK73 627 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 TMX2Q9Y320 296 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 ATRNL1Q5VV63 1379 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 RGPD3A6NKT7 1758 aaPredicted RBP4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 RGPD4Q7Z3J3 1758 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 FZD9O00144 591 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 PES1O00541 588 aaKnown RBP4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 CYTH3O43739 400 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 TPM2P07951 284 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 ALAS1P13196 640 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 SNAP25P60880 206 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 NBPF12Q5TAG4 269 aaPredicted RBP4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 PRAMEF18Q5VWM3 479 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 ARL6IP4Q66PJ3 421 aaKnown RBP4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 KLHL10Q6JEL2 608 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 NSMFQ6X4W1 530 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 KRBA2Q6ZNG9 492 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 CCDC84Q86UT8 332 aaPredicted RBP4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 GAS2L3Q86XJ1 694 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 DAGLBQ8NCG7 672 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 MKL1Q969V6 931 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 ZHX3Q9H4I2 956 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 HOMER2Q9NSB8 354 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 LRWD1Q9UFC0 647 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 SYNPO2Q9UMS6 1093 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 PPP2R3BQ9Y5P8 575 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 ZHX2Q9Y6X8 837 aa4.66□□□□□ -1.66
ATP13A3-206ENST00000461660 MYH13Q9UKX3 1938 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 CCDC88AQ3V6T2 1871 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms