RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 POLR3KQ9Y2Y1 108 aaPredicted RBP5.72□□□□□ -1.49
CLK1-206ENST00000461326 SLC12A7Q9Y666 1083 aa5.72□□□□□ -1.49
CLK1-206ENST00000461326 ADAMTS20P59510 1910 aa5.72□□□□□ -1.49
CLK1-206ENST00000461326 ZC3H12DA2A288 527 aaKnown RBP5.71□□□□□ -1.5
CLK1-206ENST00000461326 KLF4O43474 513 aa5.71□□□□□ -1.5
CLK1-206ENST00000461326 HTR3BO95264 441 aa5.71□□□□□ -1.5
CLK1-206ENST00000461326 ETFBP38117 255 aa5.71□□□□□ -1.5
CLK1-206ENST00000461326 CASP7P55210 303 aa5.71□□□□□ -1.5
CLK1-206ENST00000461326 CLCQ05315 142 aa5.71□□□□□ -1.5
CLK1-206ENST00000461326 SERINC3Q13530 473 aa5.71□□□□□ -1.5
CLK1-206ENST00000461326 TMEM201Q5SNT2 666 aa5.71□□□□□ -1.5
CLK1-206ENST00000461326 FBXW10Q5XX13 1052 aa5.71□□□□□ -1.5
CLK1-206ENST00000461326 CCDC81Q6ZN84 652 aa5.71□□□□□ -1.5
CLK1-206ENST00000461326 LSRQ86X29 649 aaPredicted RBP5.71□□□□□ -1.5
CLK1-206ENST00000461326 MCATQ8IVS2 390 aaKnown RBP5.71□□□□□ -1.5
CLK1-206ENST00000461326 ZDHHC14Q8IZN3 488 aa5.71□□□□□ -1.5
CLK1-206ENST00000461326 SHISA4Q96DD7 197 aa5.71□□□□□ -1.5
CLK1-206ENST00000461326 ZSWIM4Q9H7M6 989 aa5.71□□□□□ -1.5
CLK1-206ENST00000461326 ACTR10Q9NZ32 417 aa5.71□□□□□ -1.5
CLK1-206ENST00000461326 TMA7Q9Y2S6 64 aaKnown RBP5.71□□□□□ -1.5
CLK1-206ENST00000461326 MRVI1Q9Y6F6 885 aa5.71□□□□□ -1.5
CLK1-206ENST00000461326 N4BP3O15049 544 aa5.7□□□□□ -1.5
CLK1-206ENST00000461326 GALK1P51570 392 aa5.7□□□□□ -1.5
CLK1-206ENST00000461326 SIRT2Q8IXJ6 389 aa5.7□□□□□ -1.5
CLK1-206ENST00000461326 CYB5D2Q8WUJ1 264 aa5.7□□□□□ -1.5
CLK1-206ENST00000461326 SMAD7O15105 426 aaKnown RBP5.69□□□□□ -1.5
CLK1-206ENST00000461326 GRIN3BO60391 1043 aa5.69□□□□□ -1.5
CLK1-206ENST00000461326 EPHB3P54753 998 aa5.69□□□□□ -1.5
CLK1-206ENST00000461326 TEKQ02763 1124 aa5.69□□□□□ -1.5
CLK1-206ENST00000461326 NLRX1Q86UT6 975 aa5.69□□□□□ -1.5
CLK1-206ENST00000461326 RNF141Q8WVD5 230 aa5.69□□□□□ -1.5
CLK1-206ENST00000461326 LINC01599Q8WXQ3 324 aa5.69□□□□□ -1.5
CLK1-206ENST00000461326 MRFAP1L1Q96HT8 127 aa5.69□□□□□ -1.5
CLK1-206ENST00000461326 LUC7LQ9NQ29 371 aaKnown RBP5.69□□□□□ -1.5
CLK1-206ENST00000461326 CRTAC1Q9NQ79 661 aa5.69□□□□□ -1.5
CLK1-206ENST00000461326 REV1Q9UBZ9 1251 aa5.69□□□□□ -1.5
CLK1-206ENST00000461326 PLCG1P19174 1290 aa5.68□□□□□ -1.5
CLK1-206ENST00000461326 GUCY2CP25092 1073 aa5.68□□□□□ -1.5
CLK1-206ENST00000461326 CCNFP41002 786 aa5.68□□□□□ -1.5
CLK1-206ENST00000461326 YARSP54577 528 aaKnown RBP5.68□□□□□ -1.5
CLK1-206ENST00000461326 PLP2Q04941 152 aa5.68□□□□□ -1.5
CLK1-206ENST00000461326 EFEMP1Q12805 493 aa5.68□□□□□ -1.5
CLK1-206ENST00000461326 FXNQ16595 210 aa5.68□□□□□ -1.5
CLK1-206ENST00000461326 CLEC16AQ2KHT3 1053 aa5.68□□□□□ -1.5
CLK1-206ENST00000461326 INTS3Q68E01 1043 aaKnown RBP5.68□□□□□ -1.5
CLK1-206ENST00000461326 CNKSR3Q6P9H4 555 aa5.68□□□□□ -1.5
CLK1-206ENST00000461326 HNRNPLLQ8WVV9 542 aaKnown RBP5.68□□□□□ -1.5
CLK1-206ENST00000461326 ACSF2Q96CM8 615 aaPredicted RBP5.68□□□□□ -1.5
CLK1-206ENST00000461326 EBF1Q9UH73 591 aa5.68□□□□□ -1.5
CLK1-206ENST00000461326 ABLIM1O14639 778 aa5.67□□□□□ -1.5
CLK1-206ENST00000461326 VIPR1P32241 457 aa5.67□□□□□ -1.5
CLK1-206ENST00000461326 SLC14A2Q15849 920 aa5.67□□□□□ -1.5
CLK1-206ENST00000461326 DDR2Q16832 855 aa5.67□□□□□ -1.5
CLK1-206ENST00000461326 VMACQ2NL98 169 aa5.67□□□□□ -1.5
CLK1-206ENST00000461326 CDCP2Q5VXM1 449 aa5.67□□□□□ -1.5
CLK1-206ENST00000461326 OVOS1Q6IE37 1185 aa5.67□□□□□ -1.5
CLK1-206ENST00000461326 NLRC3Q7RTR2 1065 aa5.67□□□□□ -1.5
CLK1-206ENST00000461326 FRMD5Q7Z6J6 570 aa5.67□□□□□ -1.5
CLK1-206ENST00000461326 SLFN12Q8IYM2 578 aa5.67□□□□□ -1.5
CLK1-206ENST00000461326 FAM169BQ8N8A8 192 aa5.67□□□□□ -1.5
CLK1-206ENST00000461326 ADAM7Q9H2U9 754 aa5.67□□□□□ -1.5
CLK1-206ENST00000461326 CNTD2Q9H8S5 307 aa5.67□□□□□ -1.5
CLK1-206ENST00000461326 CDK11AQ9UQ88 783 aaPredicted RBP5.67□□□□□ -1.5
CLK1-206ENST00000461326 IRS4O14654 1257 aaPredicted RBP5.66□□□□□ -1.5
CLK1-206ENST00000461326 TNFRSF10CO14798 259 aa5.66□□□□□ -1.5
CLK1-206ENST00000461326 NRDCO43847 1150 aa5.66□□□□□ -1.5
CLK1-206ENST00000461326 SMARCA5O60264 1052 aaPredicted RBP5.66□□□□□ -1.5
CLK1-206ENST00000461326 BMS1Q14692 1282 aaKnown RBP5.66□□□□□ -1.5
CLK1-206ENST00000461326 LINC01356Q8N9X3 169 aa5.66□□□□□ -1.5
CLK1-206ENST00000461326 SYT8Q8NBV8 401 aa5.66□□□□□ -1.5
CLK1-206ENST00000461326 FAM13CQ8NE31 585 aa5.66□□□□□ -1.5
CLK1-206ENST00000461326 MZB1Q8WU39 189 aa5.66□□□□□ -1.5
CLK1-206ENST00000461326 SRPK1Q96SB4 655 aaKnown RBP5.66□□□□□ -1.5
CLK1-206ENST00000461326 G6PC3Q9BUM1 346 aa5.66□□□□□ -1.5
CLK1-206ENST00000461326 BDH2Q9BUT1 245 aa5.66□□□□□ -1.5
CLK1-206ENST00000461326 CCDC113Q9H0I3 377 aa5.66□□□□□ -1.5
CLK1-206ENST00000461326 PHAXQ9H814 394 aaKnown RBP5.66□□□□□ -1.5
CLK1-206ENST00000461326 CNNM2Q9H8M5 875 aa5.66□□□□□ -1.5
CLK1-206ENST00000461326 EPB41L4AQ9HCS5 686 aaPredicted RBP5.66□□□□□ -1.5
CLK1-206ENST00000461326 ZMYM5Q9UJ78 669 aa5.66□□□□□ -1.5
CLK1-206ENST00000461326 MSRB2Q9Y3D2 182 aa5.66□□□□□ -1.5
CLK1-206ENST00000461326 TLDC2A0PJX2 215 aa5.65□□□□□ -1.5
CLK1-206ENST00000461326 LRRN2O75325 713 aa5.65□□□□□ -1.5
CLK1-206ENST00000461326 USP2O75604 605 aaPredicted RBP5.65□□□□□ -1.5
CLK1-206ENST00000461326 NME1P15531 152 aaKnown RBP5.65□□□□□ -1.5
CLK1-206ENST00000461326 RPL10P27635 214 aaKnown RBP5.65□□□□□ -1.5
CLK1-206ENST00000461326 KIR2DL1P43626 348 aaPredicted RBP5.65□□□□□ -1.5
CLK1-206ENST00000461326 KIR2DL2P43627 348 aaPredicted RBP5.65□□□□□ -1.5
CLK1-206ENST00000461326 RASA3Q14644 834 aa5.65□□□□□ -1.5
CLK1-206ENST00000461326 GIMAP6Q6P9H5 292 aa5.65□□□□□ -1.5
CLK1-206ENST00000461326 RNF111Q6ZNA4 994 aa5.65□□□□□ -1.5
CLK1-206ENST00000461326 FAM129CQ86XR2 697 aa5.65□□□□□ -1.5
CLK1-206ENST00000461326 ZNF669Q96BR6 464 aaPredicted RBP5.65□□□□□ -1.5
CLK1-206ENST00000461326 DEPDC7Q96QD5 511 aa5.65□□□□□ -1.5
CLK1-206ENST00000461326 ASPNQ9BXN1 380 aa5.65□□□□□ -1.5
CLK1-206ENST00000461326 ASCC2Q9H1I8 757 aaPredicted RBP5.65□□□□□ -1.5
CLK1-206ENST00000461326 PALD1Q9ULE6 856 aa5.65□□□□□ -1.5
CLK1-206ENST00000461326 MYRFQ9Y2G1 1151 aa5.65□□□□□ -1.5
CLK1-206ENST00000461326 CORINQ9Y5Q5 1042 aa5.65□□□□□ -1.5
CLK1-206ENST00000461326 A0A1W2PQH9 124 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms