RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 KCTD1Q719H9 257 aa11.42□□□□□ -0.58
CD40-203ENST00000461171 CHURC1Q8WUH1 139 aa11.42□□□□□ -0.58
CD40-203ENST00000461171 TCP11L1Q9NUJ3 509 aa11.42□□□□□ -0.58
CD40-203ENST00000461171 PHF24Q9UPV7 400 aa11.42□□□□□ -0.58
CD40-203ENST00000461171 LTBP2Q14767 1821 aa11.42□□□□□ -0.58
CD40-203ENST00000461171 MCM3APO60318 1980 aa11.41□□□□□ -0.58
CD40-203ENST00000461171 LRRC37A2A6NM11 1700 aa11.41□□□□□ -0.58
CD40-203ENST00000461171 KBTBD13C9JR72 458 aa11.41□□□□□ -0.58
CD40-203ENST00000461171 ADAMTS4O75173 837 aa11.41□□□□□ -0.58
CD40-203ENST00000461171 RARBP10826 455 aa11.41□□□□□ -0.58
CD40-203ENST00000461171 AKR1A1P14550 325 aa11.41□□□□□ -0.58
CD40-203ENST00000461171 ATN1P54259 1190 aaPredicted RBP11.41□□□□□ -0.58
CD40-203ENST00000461171 RTP1P59025 263 aa11.41□□□□□ -0.58
CD40-203ENST00000461171 HAND2P61296 217 aa11.41□□□□□ -0.58
CD40-203ENST00000461171 AKNAD1Q5T1N1 836 aa11.41□□□□□ -0.58
CD40-203ENST00000461171 C1orf53Q5VUE5 145 aa11.41□□□□□ -0.58
CD40-203ENST00000461171 FAM133AQ8N9E0 248 aa11.41□□□□□ -0.58
CD40-203ENST00000461171 DCAF4Q8WV16 495 aa11.41□□□□□ -0.58
CD40-203ENST00000461171 RILPL2Q969X0 211 aa11.41□□□□□ -0.58
CD40-203ENST00000461171 LENG1Q96BZ8 264 aaPredicted RBP11.41□□□□□ -0.58
CD40-203ENST00000461171 DDX11Q96FC9 970 aa11.41□□□□□ -0.58
CD40-203ENST00000461171 ACAD9Q9H845 621 aa11.41□□□□□ -0.58
CD40-203ENST00000461171 A1CFQ9NQ94 594 aaKnown RBP11.41□□□□□ -0.58
CD40-203ENST00000461171 XPNPEP3Q9NQH7 507 aa11.41□□□□□ -0.58
CD40-203ENST00000461171 RNF146Q9NTX7 359 aa11.41□□□□□ -0.58
CD40-203ENST00000461171 PRR12Q9ULL5 1215 aa11.41□□□□□ -0.58
CD40-203ENST00000461171 CNPY2Q9Y2B0 182 aa11.41□□□□□ -0.58
CD40-203ENST00000461171 CTDP1Q9Y5B0 961 aaPredicted RBP11.41□□□□□ -0.58
CD40-203ENST00000461171 NEDD4P46934 1319 aa11.4□□□□□ -0.58
CD40-203ENST00000461171 PGK1P00558 417 aa11.4□□□□□ -0.58
CD40-203ENST00000461171 SNHG28P0DPA3 235 aa11.4□□□□□ -0.58
CD40-203ENST00000461171 TOP1P11387 765 aaKnown RBP11.4□□□□□ -0.58
CD40-203ENST00000461171 PDE4AP27815 886 aa11.4□□□□□ -0.58
CD40-203ENST00000461171 ADCYAP1R1P41586 468 aa11.4□□□□□ -0.58
CD40-203ENST00000461171 MFAP1P55081 439 aaKnown RBP11.4□□□□□ -0.58
CD40-203ENST00000461171 TKFCQ3LXA3 575 aa11.4□□□□□ -0.58
CD40-203ENST00000461171 RRP12Q5JTH9 1297 aaKnown RBP11.4□□□□□ -0.58
CD40-203ENST00000461171 BTNL9Q6UXG8 535 aa11.4□□□□□ -0.58
CD40-203ENST00000461171 ANKRD35Q8N283 1001 aa11.4□□□□□ -0.58
CD40-203ENST00000461171 AGBL1Q96MI9 1066 aa11.4□□□□□ -0.58
CD40-203ENST00000461171 TMEM47Q9BQJ4 181 aa11.4□□□□□ -0.58
CD40-203ENST00000461171 KATNBL1Q9H079 304 aa11.4□□□□□ -0.58
CD40-203ENST00000461171 TOMM22Q9NS69 142 aa11.4□□□□□ -0.58
CD40-203ENST00000461171 HOMER2Q9NSB8 354 aa11.4□□□□□ -0.58
CD40-203ENST00000461171 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.4□□□□□ -0.58
CD40-203ENST00000461171 SUPT16HQ9Y5B9 1047 aaKnown RBP11.4□□□□□ -0.58
CD40-203ENST00000461171 LCTP09848 1927 aa11.4□□□□□ -0.58
CD40-203ENST00000461171 ASTN1O14525 1302 aa11.39□□□□□ -0.59
CD40-203ENST00000461171 SYNRGQ9UMZ2 1314 aa11.39□□□□□ -0.59
CD40-203ENST00000461171 ADCY6O43306 1168 aa11.39□□□□□ -0.59
CD40-203ENST00000461171 ICAM1P05362 532 aa11.39□□□□□ -0.59
CD40-203ENST00000461171 SLC4A3P48751 1232 aa11.39□□□□□ -0.59
CD40-203ENST00000461171 NT5C2P49902 561 aa11.39□□□□□ -0.59
CD40-203ENST00000461171 IKQ13123 557 aaPredicted RBP11.39□□□□□ -0.59
CD40-203ENST00000461171 CCDC96Q2M329 555 aa11.39□□□□□ -0.59
CD40-203ENST00000461171 LRIT3Q3SXY7 679 aa11.39□□□□□ -0.59
CD40-203ENST00000461171 CCSAPQ6IQ19 270 aaPredicted RBP11.39□□□□□ -0.59
CD40-203ENST00000461171 CWC27Q6UX04 472 aaKnown RBP11.39□□□□□ -0.59
CD40-203ENST00000461171 SLC39A5Q6ZMH5 540 aa11.39□□□□□ -0.59
CD40-203ENST00000461171 MFSD6Q6ZSS7 791 aa11.39□□□□□ -0.59
CD40-203ENST00000461171 ARMCX2Q7L311 632 aa11.39□□□□□ -0.59
CD40-203ENST00000461171 TDHQ8IZJ6 230 aa11.39□□□□□ -0.59
CD40-203ENST00000461171 CHMP4CQ96CF2 233 aa11.39□□□□□ -0.59
CD40-203ENST00000461171 IL25Q9H293 177 aa11.39□□□□□ -0.59
CD40-203ENST00000461171 RANBP17Q9H2T7 1088 aaKnown RBP11.39□□□□□ -0.59
CD40-203ENST00000461171 RNF41Q9H4P4 317 aaPredicted RBP11.39□□□□□ -0.59
CD40-203ENST00000461171 DIAPH3Q9NSV4 1193 aa11.39□□□□□ -0.59
CD40-203ENST00000461171 ZHX1Q9UKY1 873 aaPredicted RBP11.39□□□□□ -0.59
CD40-203ENST00000461171 ISY1Q9ULR0 285 aaKnown RBP11.39□□□□□ -0.59
CD40-203ENST00000461171 SOWAHBA6NEL2 793 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 HIP1O00291 1037 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 DUSP11O75319 330 aaKnown RBP11.38□□□□□ -0.59
CD40-203ENST00000461171 PDHBP11177 359 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 GSPT1P15170 499 aaKnown RBP11.38□□□□□ -0.59
CD40-203ENST00000461171 CST5P28325 142 aaPredicted RBP11.38□□□□□ -0.59
CD40-203ENST00000461171 SNAP25P60880 206 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 CNTN2Q02246 1040 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 ACVR2BQ13705 512 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 TRIM60Q495X7 471 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 MUM1L1Q5H9M0 696 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 TTBK2Q6IQ55 1244 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 RNF180Q86T96 592 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 CCDC144CPQ8IYA2 1237 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 KLHDC9Q8NEP7 349 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 FERMT2Q96AC1 680 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 LRCH3Q96II8 777 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 TTC14Q96N46 770 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 TRERF1Q96PN7 1200 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 DSCC1Q9BVC3 393 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 UBE2OQ9C0C9 1292 aaKnown RBP11.38□□□□□ -0.59
CD40-203ENST00000461171 UPF3AQ9H1J1 476 aaKnown RBP11.38□□□□□ -0.59
CD40-203ENST00000461171 ABHD16BQ9H3Z7 469 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 PDLIM7Q9NR12 457 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 FAM184BQ9ULE4 1060 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 ATP11BQ9Y2G3 1177 aa11.38□□□□□ -0.59
CD40-203ENST00000461171 A0A1W2PQ45 241 aaPredicted RBP11.37□□□□□ -0.59
CD40-203ENST00000461171 A0A1W2PQY0 241 aa11.37□□□□□ -0.59
CD40-203ENST00000461171 MYADML2A6NDP7 307 aa11.37□□□□□ -0.59
CD40-203ENST00000461171 POTEB2H3BUK9 544 aa11.37□□□□□ -0.59
CD40-203ENST00000461171 ALAS1P13196 640 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms