RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 MFSD6Q6ZSS7 791 aa21.72■■□□□ 1.07
COL9A2-205ENST00000461118 RUFY2Q8WXA3 655 aa21.72■■□□□ 1.07
COL9A2-205ENST00000461118 NUP88Q99567 741 aaPredicted RBP21.72■■□□□ 1.07
COL9A2-205ENST00000461118 IL25Q9H293 177 aa21.72■■□□□ 1.07
COL9A2-205ENST00000461118 RNF41Q9H4P4 317 aaPredicted RBP21.72■■□□□ 1.07
COL9A2-205ENST00000461118 CTNNA3Q9UI47 895 aa21.72■■□□□ 1.07
COL9A2-205ENST00000461118 NMT2O60551 498 aa21.71■■□□□ 1.07
COL9A2-205ENST00000461118 MYCNP04198 464 aaPredicted RBP21.71■■□□□ 1.07
COL9A2-205ENST00000461118 PGK2P07205 417 aa21.71■■□□□ 1.07
COL9A2-205ENST00000461118 TAL1P17542 331 aaPredicted RBP21.71■■□□□ 1.07
COL9A2-205ENST00000461118 ZNF792Q3KQV3 632 aa21.71■■□□□ 1.07
COL9A2-205ENST00000461118 LRRC47Q8N1G4 583 aaKnown RBP21.71■■□□□ 1.07
COL9A2-205ENST00000461118 PRPF38AQ8NAV1 312 aaKnown RBP21.71■■□□□ 1.07
COL9A2-205ENST00000461118 REPS2Q8NFH8 660 aa21.71■■□□□ 1.07
COL9A2-205ENST00000461118 SLF1Q9BQI6 1058 aa21.71■■□□□ 1.07
COL9A2-205ENST00000461118 TOMM22Q9NS69 142 aa21.71■■□□□ 1.07
COL9A2-205ENST00000461118 NRBP1Q9UHY1 535 aa21.71■■□□□ 1.07
COL9A2-205ENST00000461118 STX8Q9UNK0 236 aa21.71■■□□□ 1.07
COL9A2-205ENST00000461118 SLC25A27O95847 323 aa21.7■■□□□ 1.06
COL9A2-205ENST00000461118 ZNF865P0CJ78 1059 aaPredicted RBP21.7■■□□□ 1.06
COL9A2-205ENST00000461118 SLFN13Q68D06 897 aa21.7■■□□□ 1.06
COL9A2-205ENST00000461118 RIOX2Q8IUF8 465 aa21.7■■□□□ 1.06
COL9A2-205ENST00000461118 TBC1D10CQ8IV04 446 aa21.7■■□□□ 1.06
COL9A2-205ENST00000461118 GMCL1Q96IK5 515 aa21.7■■□□□ 1.06
COL9A2-205ENST00000461118 XPNPEP3Q9NQH7 507 aa21.7■■□□□ 1.06
COL9A2-205ENST00000461118 FEM1BQ9UK73 627 aa21.7■■□□□ 1.06
COL9A2-205ENST00000461118 ZNF214Q9UL59 606 aaPredicted RBP21.7■■□□□ 1.06
COL9A2-205ENST00000461118 PGK1P00558 417 aa21.69■■□□□ 1.06
COL9A2-205ENST00000461118 BMP3P12645 472 aa21.69■■□□□ 1.06
COL9A2-205ENST00000461118 RRP12Q5JTH9 1297 aaKnown RBP21.69■■□□□ 1.06
COL9A2-205ENST00000461118 MYLIPQ8WY64 445 aa21.69■■□□□ 1.06
COL9A2-205ENST00000461118 TINF2Q9BSI4 451 aa21.69■■□□□ 1.06
COL9A2-205ENST00000461118 DIS3Q9Y2L1 958 aaKnown RBP21.69■■□□□ 1.06
COL9A2-205ENST00000461118 LAMA4Q16363 1823 aa21.69■■□□□ 1.06
COL9A2-205ENST00000461118 KIAA0355O15063 1070 aa21.68■■□□□ 1.06
COL9A2-205ENST00000461118 ADAMTS4O75173 837 aa21.68■■□□□ 1.06
COL9A2-205ENST00000461118 IMMTQ16891 758 aaKnown RBP21.68■■□□□ 1.06
COL9A2-205ENST00000461118 SAMD1Q6SPF0 538 aaPredicted RBP21.68■■□□□ 1.06
COL9A2-205ENST00000461118 MAFAQ8NHW3 353 aaPredicted RBP21.68■■□□□ 1.06
COL9A2-205ENST00000461118 LENG1Q96BZ8 264 aaPredicted RBP21.68■■□□□ 1.06
COL9A2-205ENST00000461118 TTC14Q96N46 770 aa21.68■■□□□ 1.06
COL9A2-205ENST00000461118 MMP19Q99542 508 aa21.68■■□□□ 1.06
COL9A2-205ENST00000461118 A0A1W2PQ45 241 aaPredicted RBP21.67■■□□□ 1.06
COL9A2-205ENST00000461118 A0A1W2PQY0 241 aa21.67■■□□□ 1.06
COL9A2-205ENST00000461118 ATP2A1O14983 1001 aa21.67■■□□□ 1.06
COL9A2-205ENST00000461118 SGSM2O43147 1006 aa21.67■■□□□ 1.06
COL9A2-205ENST00000461118 PLA2G6O60733 806 aa21.67■■□□□ 1.06
COL9A2-205ENST00000461118 CLTBP09497 229 aa21.67■■□□□ 1.06
COL9A2-205ENST00000461118 RARBP10826 455 aa21.67■■□□□ 1.06
COL9A2-205ENST00000461118 STAT3P40763 770 aa21.67■■□□□ 1.06
COL9A2-205ENST00000461118 ESR2Q92731 530 aa21.67■■□□□ 1.06
COL9A2-205ENST00000461118 FDX1P10109 184 aa21.66■■□□□ 1.06
COL9A2-205ENST00000461118 TOP1P11387 765 aaKnown RBP21.66■■□□□ 1.06
COL9A2-205ENST00000461118 MCCP23508 829 aa21.66■■□□□ 1.06
COL9A2-205ENST00000461118 COPB2P35606 906 aa21.66■■□□□ 1.06
COL9A2-205ENST00000461118 SLC1A4P43007 532 aa21.66■■□□□ 1.06
COL9A2-205ENST00000461118 RCSD1Q6JBY9 416 aa21.66■■□□□ 1.06
COL9A2-205ENST00000461118 NEDD4P46934 1319 aa21.65■■□□□ 1.06
COL9A2-205ENST00000461118 TMEM232C9JQI7 657 aa21.65■■□□□ 1.06
COL9A2-205ENST00000461118 ZBED4O75132 1171 aa21.65■■□□□ 1.06
COL9A2-205ENST00000461118 CCSAPQ6IQ19 270 aaPredicted RBP21.65■■□□□ 1.06
COL9A2-205ENST00000461118 RNF180Q86T96 592 aa21.65■■□□□ 1.06
COL9A2-205ENST00000461118 FAM160B2Q86V87 743 aa21.65■■□□□ 1.06
COL9A2-205ENST00000461118 CHURC1Q8WUH1 139 aa21.65■■□□□ 1.06
COL9A2-205ENST00000461118 TMEM47Q9BQJ4 181 aa21.65■■□□□ 1.06
COL9A2-205ENST00000461118 TEX13BQ9BXU2 312 aa21.65■■□□□ 1.06
COL9A2-205ENST00000461118 SLC38A10Q9HBR0 1119 aa21.65■■□□□ 1.06
COL9A2-205ENST00000461118 STAT2P52630 851 aa21.64■■□□□ 1.05
COL9A2-205ENST00000461118 FAAP100Q0VG06 881 aa21.64■■□□□ 1.05
COL9A2-205ENST00000461118 KCTD2Q14681 263 aa21.64■■□□□ 1.05
COL9A2-205ENST00000461118 BMP2KLQ5H9B9 411 aa21.64■■□□□ 1.05
COL9A2-205ENST00000461118 ANKRD33Q7Z3H0 272 aa21.64■■□□□ 1.05
COL9A2-205ENST00000461118 KIFC2Q96AC6 838 aa21.64■■□□□ 1.05
COL9A2-205ENST00000461118 CCDC136Q96JN2 1154 aa21.64■■□□□ 1.05
COL9A2-205ENST00000461118 MUC3AQ02505 3323 aa21.63■■□□□ 1.05
COL9A2-205ENST00000461118 GBF1Q92538 1859 aa21.63■■□□□ 1.05
COL9A2-205ENST00000461118 TMEM265A0A087WTH1 108 aa21.63■■□□□ 1.05
COL9A2-205ENST00000461118 SNAI1O95863 264 aaPredicted RBP21.63■■□□□ 1.05
COL9A2-205ENST00000461118 AKR1A1P14550 325 aa21.63■■□□□ 1.05
COL9A2-205ENST00000461118 OAZ1P54368 228 aa21.63■■□□□ 1.05
COL9A2-205ENST00000461118 PTH1RQ03431 593 aa21.63■■□□□ 1.05
COL9A2-205ENST00000461118 CCDC178Q5BJE1 867 aa21.63■■□□□ 1.05
COL9A2-205ENST00000461118 DGKHQ86XP1 1220 aa21.63■■□□□ 1.05
COL9A2-205ENST00000461118 KLHDC9Q8NEP7 349 aa21.63■■□□□ 1.05
COL9A2-205ENST00000461118 DCAF4Q8WV16 495 aa21.63■■□□□ 1.05
COL9A2-205ENST00000461118 RNPC3Q96LT9 517 aaKnown RBP21.63■■□□□ 1.05
COL9A2-205ENST00000461118 CNNM2Q9H8M5 875 aa21.63■■□□□ 1.05
COL9A2-205ENST00000461118 RIPK3Q9Y572 518 aa21.63■■□□□ 1.05
COL9A2-205ENST00000461118 TTC28Q96AY4 2481 aa21.63■■□□□ 1.05
COL9A2-205ENST00000461118 SYNRGQ9UMZ2 1314 aa21.62■■□□□ 1.05
COL9A2-205ENST00000461118 DNAJC25-GNG10A0A024R161 153 aa21.62■■□□□ 1.05
COL9A2-205ENST00000461118 PQBP1O60828 265 aaKnown RBP21.62■■□□□ 1.05
COL9A2-205ENST00000461118 KDM4AO75164 1064 aa21.62■■□□□ 1.05
COL9A2-205ENST00000461118 ACLYP53396 1101 aa21.62■■□□□ 1.05
COL9A2-205ENST00000461118 MAP4K1Q92918 833 aa21.62■■□□□ 1.05
COL9A2-205ENST00000461118 TOX2Q96NM4 488 aa21.62■■□□□ 1.05
COL9A2-205ENST00000461118 TSEN34Q9BSV6 310 aaKnown RBP21.62■■□□□ 1.05
COL9A2-205ENST00000461118 KRT23Q9C075 422 aa21.62■■□□□ 1.05
COL9A2-205ENST00000461118 ZSWIM5Q9P217 1185 aa21.62■■□□□ 1.05
COL9A2-205ENST00000461118 U3KPZ7 1027 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms