RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 STRNO43815 780 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 GOLGA8HP0CJ92 632 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 SLC16A2P36021 539 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 TKFCQ3LXA3 575 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 SYNE3Q6ZMZ3 975 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 NCAPG2Q86XI2 1143 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 TNS4Q8IZW8 715 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 ABRAQ8N0Z2 381 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 CTCFLQ8NI51 663 aaPredicted RBP12.89□□□□□ -0.35
APTX-209ENST00000460940 NUDT12Q9BQG2 462 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 LRRC2Q9BYS8 371 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 FBXO40Q9UH90 709 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 MAD2L2Q9UI95 211 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 CYP46A1Q9Y6A2 500 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 ICAM1P05362 532 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 PTPREP23469 700 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 GRB14Q14449 540 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 WDR78Q5VTH9 848 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 RUFY3Q7L099 469 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.89□□□□□ -0.35
APTX-209ENST00000460940 CHST13Q8NET6 341 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 RAET1EQ8TD07 263 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 LZTS2Q9BRK4 669 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 RAVER2Q9HCJ3 691 aaKnown RBP12.89□□□□□ -0.35
APTX-209ENST00000460940 PTCH2Q9Y6C5 1203 aa12.89□□□□□ -0.35
APTX-209ENST00000460940 KLRF2D3W0D1 207 aa12.88□□□□□ -0.35
APTX-209ENST00000460940 ECM2O94769 699 aaPredicted RBP12.88□□□□□ -0.35
APTX-209ENST00000460940 SEC24BO95487 1268 aa12.88□□□□□ -0.35
APTX-209ENST00000460940 RGS2P41220 211 aa12.88□□□□□ -0.35
APTX-209ENST00000460940 SLC4A3P48751 1232 aa12.88□□□□□ -0.35
APTX-209ENST00000460940 FLT3LGP49771 235 aa12.88□□□□□ -0.35
APTX-209ENST00000460940 GNAQP50148 359 aa12.88□□□□□ -0.35
APTX-209ENST00000460940 MORN1Q5T089 497 aa12.88□□□□□ -0.35
APTX-209ENST00000460940 CPXCR1Q8N123 301 aa12.88□□□□□ -0.35
APTX-209ENST00000460940 SLAIN1Q8ND83 568 aa12.88□□□□□ -0.35
APTX-209ENST00000460940 NUP133Q8WUM0 1156 aa12.88□□□□□ -0.35
APTX-209ENST00000460940 TCEANC2Q96MN5 208 aa12.88□□□□□ -0.35
APTX-209ENST00000460940 AGXT2Q9BYV1 514 aa12.88□□□□□ -0.35
APTX-209ENST00000460940 GJD2Q9UKL4 321 aa12.88□□□□□ -0.35
APTX-209ENST00000460940 ZNF536O15090 1300 aa12.88□□□□□ -0.35
APTX-209ENST00000460940 FCER1AP12319 257 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 XRCC5P13010 732 aaKnown RBP12.87□□□□□ -0.35
APTX-209ENST00000460940 CPA1P15085 419 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 CCDC174Q6PII3 467 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 APOA5Q6Q788 366 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 Q6ZUG5 572 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 TRMT44Q8IYL2 757 aaKnown RBP12.87□□□□□ -0.35
APTX-209ENST00000460940 ADGRF4Q8IZF3 695 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 STAG2Q8N3U4 1231 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 USP6NLQ92738 828 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 APBA2Q99767 749 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 UPF2Q9HAU5 1272 aaKnown RBP12.87□□□□□ -0.35
APTX-209ENST00000460940 CCPG1Q9ULG6 757 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 GABRQQ9UN88 632 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 DHX16O60231 1041 aaKnown RBP12.87□□□□□ -0.35
APTX-209ENST00000460940 TPM2P07951 284 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 SMARCA1P28370 1054 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 MAP2K5Q13163 448 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 KCTD2Q14681 263 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 CDC37Q16543 378 aaPredicted RBP12.87□□□□□ -0.35
APTX-209ENST00000460940 MICU3Q86XE3 530 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 PXYLP1Q8TE99 480 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 MMP19Q99542 508 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 MYL10Q9BUA6 226 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 UBA5Q9GZZ9 404 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 ACAD9Q9H845 621 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 RBM28Q9NW13 759 aaKnown RBP12.87□□□□□ -0.35
APTX-209ENST00000460940 SLC5A4Q9NY91 659 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 HPS5Q9UPZ3 1129 aa12.87□□□□□ -0.35
APTX-209ENST00000460940 NID2Q14112 1375 aa12.86□□□□□ -0.35
APTX-209ENST00000460940 KLF18A0A0U1RQI7 1052 aa12.86□□□□□ -0.35
APTX-209ENST00000460940 FSD2A1L4K1 749 aa12.86□□□□□ -0.35
APTX-209ENST00000460940 ZBTB43O43298 467 aa12.86□□□□□ -0.35
APTX-209ENST00000460940 HOXC6P09630 235 aa12.86□□□□□ -0.35
APTX-209ENST00000460940 ADORA2AP29274 412 aa12.86□□□□□ -0.35
APTX-209ENST00000460940 PPP2R5BQ15173 497 aa12.86□□□□□ -0.35
APTX-209ENST00000460940 SLC9C1Q4G0N8 1177 aa12.86□□□□□ -0.35
APTX-209ENST00000460940 BRF1Q92994 677 aa12.86□□□□□ -0.35
APTX-209ENST00000460940 ARMC5Q96C12 935 aa12.86□□□□□ -0.35
APTX-209ENST00000460940 MTMR8Q96EF0 704 aa12.86□□□□□ -0.35
APTX-209ENST00000460940 AGBL1Q96MI9 1066 aa12.86□□□□□ -0.35
APTX-209ENST00000460940 SPZ1Q9BXG8 430 aa12.86□□□□□ -0.35
APTX-209ENST00000460940 RIOX1Q9H6W3 641 aa12.86□□□□□ -0.35
APTX-209ENST00000460940 JMJD4Q9H9V9 463 aa12.86□□□□□ -0.35
APTX-209ENST00000460940 RNF146Q9NTX7 359 aa12.86□□□□□ -0.35
APTX-209ENST00000460940 PLXNB2O15031 1838 aa12.86□□□□□ -0.35
APTX-209ENST00000460940 ADCY3O60266 1144 aa12.85□□□□□ -0.35
APTX-209ENST00000460940 GRK4P32298 578 aa12.85□□□□□ -0.35
APTX-209ENST00000460940 SNAP25P60880 206 aa12.85□□□□□ -0.35
APTX-209ENST00000460940 TRAF1Q13077 416 aa12.85□□□□□ -0.35
APTX-209ENST00000460940 NBPF11Q86T75 865 aa12.85□□□□□ -0.35
APTX-209ENST00000460940 FANCBQ8NB91 859 aa12.85□□□□□ -0.35
APTX-209ENST00000460940 UPF3BQ9BZI7 483 aaKnown RBP12.85□□□□□ -0.35
APTX-209ENST00000460940 MAF1Q9H063 256 aa12.85□□□□□ -0.35
APTX-209ENST00000460940 CPVLQ9H3G5 476 aa12.85□□□□□ -0.35
APTX-209ENST00000460940 RIPK3Q9Y572 518 aa12.85□□□□□ -0.35
APTX-209ENST00000460940 GOLGA8BA8MQT2 603 aa12.85□□□□□ -0.35
APTX-209ENST00000460940 ALAS1P13196 640 aa12.85□□□□□ -0.35
APTX-209ENST00000460940 EVCP57679 992 aa12.85□□□□□ -0.35
APTX-209ENST00000460940 RTN1Q16799 776 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms