RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 ADAMTS7Q9UKP4 1686 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 MAPK8IP3Q9UPT6 1336 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 ENPP3O14638 875 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 HTR3BO95264 441 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 ECEL1O95672 775 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 NID1P14543 1247 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 IL2RBP14784 551 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 HSD3B2P26439 372 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 CDC25BP30305 580 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 TMPOP42166 694 aaKnown RBP6.33□□□□□ -1.4
SF3A3-202ENST00000460925 INPP5AQ14642 412 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 WIPI1Q5MNZ9 446 aaPredicted RBP6.33□□□□□ -1.4
SF3A3-202ENST00000460925 FBXW10Q5XX13 1052 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 ZNF530Q6P9A1 599 aaPredicted RBP6.33□□□□□ -1.4
SF3A3-202ENST00000460925 LRFN4Q6PJG9 635 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 TXNDC11Q6PKC3 985 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 HDXQ7Z353 690 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 DTWD1Q8N5C7 304 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 CELF2-AS1Q8N7Q2 184 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 GALNT6Q8NCL4 622 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 IRF7Q92985 503 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 SECISBP2LQ93073 1101 aaKnown RBP6.33□□□□□ -1.4
SF3A3-202ENST00000460925 RUNDC1Q96C34 613 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 KLHDC7BQ96G42 594 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 PLPPR2Q96GM1 343 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 TRPC5Q9UL62 973 aaPredicted RBP6.33□□□□□ -1.4
SF3A3-202ENST00000460925 PCDHGC5Q9Y5F6 944 aa6.33□□□□□ -1.4
SF3A3-202ENST00000460925 LOC100289279A0A1B0GTE1 492 aa6.32□□□□□ -1.4
SF3A3-202ENST00000460925 CYP27B1O15528 508 aa6.32□□□□□ -1.4
SF3A3-202ENST00000460925 CTSBP07858 339 aa6.32□□□□□ -1.4
SF3A3-202ENST00000460925 BCRP11274 1271 aa6.32□□□□□ -1.4
SF3A3-202ENST00000460925 CDK8P49336 464 aa6.32□□□□□ -1.4
SF3A3-202ENST00000460925 RING1Q06587 406 aa6.32□□□□□ -1.4
SF3A3-202ENST00000460925 FXNQ16595 210 aa6.32□□□□□ -1.4
SF3A3-202ENST00000460925 ZC3H12AQ5D1E8 599 aaKnown RBP6.32□□□□□ -1.4
SF3A3-202ENST00000460925 TMEM201Q5SNT2 666 aa6.32□□□□□ -1.4
SF3A3-202ENST00000460925 C8orf86Q6ZUL3 223 aa6.32□□□□□ -1.4
SF3A3-202ENST00000460925 MCM10Q7L590 875 aa6.32□□□□□ -1.4
SF3A3-202ENST00000460925 GALNT11Q8NCW6 608 aa6.32□□□□□ -1.4
SF3A3-202ENST00000460925 TMEM40Q8WWA1 233 aa6.32□□□□□ -1.4
SF3A3-202ENST00000460925 ACSBG1Q96GR2 724 aa6.32□□□□□ -1.4
SF3A3-202ENST00000460925 ZC3H12CQ9C0D7 883 aaKnown RBP6.32□□□□□ -1.4
SF3A3-202ENST00000460925 CWC22Q9HCG8 908 aaKnown RBP6.32□□□□□ -1.4
SF3A3-202ENST00000460925 KCNG1Q9UIX4 513 aa6.32□□□□□ -1.4
SF3A3-202ENST00000460925 MRPL42Q9Y6G3 142 aaKnown RBP6.32□□□□□ -1.4
SF3A3-202ENST00000460925 BTAF1O14981 1849 aa6.32□□□□□ -1.4
SF3A3-202ENST00000460925 MAP3K5Q99683 1374 aa6.31□□□□□ -1.4
SF3A3-202ENST00000460925 KDM3BQ7LBC6 1761 aa6.31□□□□□ -1.4
SF3A3-202ENST00000460925 C5P01031 1676 aa6.31□□□□□ -1.4
SF3A3-202ENST00000460925 FAM221BA6H8Z2 402 aa6.31□□□□□ -1.4
SF3A3-202ENST00000460925 GRIN3BO60391 1043 aa6.31□□□□□ -1.4
SF3A3-202ENST00000460925 RIPK4P57078 832 aa6.31□□□□□ -1.4
SF3A3-202ENST00000460925 RASGRF1Q13972 1273 aa6.31□□□□□ -1.4
SF3A3-202ENST00000460925 INTS3Q68E01 1043 aaKnown RBP6.31□□□□□ -1.4
SF3A3-202ENST00000460925 PSMD1Q99460 953 aa6.31□□□□□ -1.4
SF3A3-202ENST00000460925 TNKS2Q9H2K2 1166 aa6.31□□□□□ -1.4
SF3A3-202ENST00000460925 LGR6Q9HBX8 967 aa6.31□□□□□ -1.4
SF3A3-202ENST00000460925 GMIPQ9P107 970 aa6.31□□□□□ -1.4
SF3A3-202ENST00000460925 ADAM30Q9UKF2 790 aa6.31□□□□□ -1.4
SF3A3-202ENST00000460925 PAPPAQ13219 1627 aa6.31□□□□□ -1.4
SF3A3-202ENST00000460925 NHSQ6T4R5 1651 aa6.3□□□□□ -1.4
SF3A3-202ENST00000460925 MRC1P22897 1456 aa6.3□□□□□ -1.4
SF3A3-202ENST00000460925 A0A1W2PQH9 124 aa6.3□□□□□ -1.4
SF3A3-202ENST00000460925 ANKRD62A6NC57 917 aa6.3□□□□□ -1.4
SF3A3-202ENST00000460925 SHISA8B8ZZ34 492 aa6.3□□□□□ -1.4
SF3A3-202ENST00000460925 ADAM11O75078 769 aa6.3□□□□□ -1.4
SF3A3-202ENST00000460925 PHKG2P15735 406 aa6.3□□□□□ -1.4
SF3A3-202ENST00000460925 GUCY2CP25092 1073 aa6.3□□□□□ -1.4
SF3A3-202ENST00000460925 CD68P34810 354 aaPredicted RBP6.3□□□□□ -1.4
SF3A3-202ENST00000460925 ERVK-24P63145 666 aa6.3□□□□□ -1.4
SF3A3-202ENST00000460925 PDE4BQ07343 736 aa6.3□□□□□ -1.4
SF3A3-202ENST00000460925 TCEAL1Q15170 157 aa6.3□□□□□ -1.4
SF3A3-202ENST00000460925 PLEKHO1Q53GL0 409 aaPredicted RBP6.3□□□□□ -1.4
SF3A3-202ENST00000460925 CDCP2Q5VXM1 449 aa6.3□□□□□ -1.4
SF3A3-202ENST00000460925 ZNF772Q68DY9 489 aaPredicted RBP6.3□□□□□ -1.4
SF3A3-202ENST00000460925 MARCH10Q8NA82 808 aaPredicted RBP6.3□□□□□ -1.4
SF3A3-202ENST00000460925 ZCRB1Q8TBF4 217 aaKnown RBP6.3□□□□□ -1.4
SF3A3-202ENST00000460925 WDR89Q96FK6 387 aaPredicted RBP6.3□□□□□ -1.4
SF3A3-202ENST00000460925 RNPC3Q96LT9 517 aaKnown RBP6.3□□□□□ -1.4
SF3A3-202ENST00000460925 SLC12A7Q9Y666 1083 aa6.3□□□□□ -1.4
SF3A3-202ENST00000460925 TNS1Q9HBL0 1735 aaKnown RBP6.3□□□□□ -1.4
SF3A3-202ENST00000460925 PCDH11XQ9BZA7 1347 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 PCDH11YQ9BZA8 1340 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 TNFRSF10CO14798 259 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 PDPK1O15530 556 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 AOC2O75106 756 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 DEAF1O75398 565 aaPredicted RBP6.29□□□□□ -1.4
SF3A3-202ENST00000460925 NEFMP07197 916 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 SLFN14P0C7P3 912 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 HOXB4P17483 251 aaPredicted RBP6.29□□□□□ -1.4
SF3A3-202ENST00000460925 LIG1P18858 919 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 DGKGP49619 791 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 RBM6P78332 1123 aaKnown RBP6.29□□□□□ -1.4
SF3A3-202ENST00000460925 PDE3AQ14432 1141 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 DDB1Q16531 1140 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 FOXD4L6Q3SYB3 417 aaPredicted RBP6.29□□□□□ -1.4
SF3A3-202ENST00000460925 GLIPR1L2Q4G1C9 344 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 C1orf141Q5JVX7 400 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 FOXD4L3Q6VB84 417 aaPredicted RBP6.29□□□□□ -1.4
SF3A3-202ENST00000460925 ZNF662Q6ZS27 426 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms