RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 MPZL3Q6UWV2 235 aa4.09□□□□□ -1.75
HPS3-203ENST00000460822 KSR1Q8IVT5 923 aa4.09□□□□□ -1.75
HPS3-203ENST00000460822 SYNPOQ8N3V7 929 aa4.09□□□□□ -1.75
HPS3-203ENST00000460822 KIRREL1Q96J84 757 aa4.09□□□□□ -1.75
HPS3-203ENST00000460822 ALPK1Q96QP1 1244 aa4.09□□□□□ -1.75
HPS3-203ENST00000460822 SLC9A7Q96T83 725 aa4.09□□□□□ -1.75
HPS3-203ENST00000460822 ASCC2Q9H1I8 757 aaPredicted RBP4.09□□□□□ -1.75
HPS3-203ENST00000460822 SLAMF8Q9P0V8 285 aa4.09□□□□□ -1.75
HPS3-203ENST00000460822 G3BP2Q9UN86 482 aaKnown RBP4.09□□□□□ -1.75
HPS3-203ENST00000460822 PLAAQ9Y263 795 aa4.09□□□□□ -1.75
HPS3-203ENST00000460822 LRRC10BA6NIK2 292 aa4.09□□□□□ -1.76
HPS3-203ENST00000460822 SUSD5O60279 629 aa4.09□□□□□ -1.76
HPS3-203ENST00000460822 GDNFP39905 211 aa4.09□□□□□ -1.76
HPS3-203ENST00000460822 CLEC16AQ2KHT3 1053 aa4.09□□□□□ -1.76
HPS3-203ENST00000460822 INTS3Q68E01 1043 aaKnown RBP4.09□□□□□ -1.76
HPS3-203ENST00000460822 DNAJB8Q8NHS0 232 aa4.09□□□□□ -1.76
HPS3-203ENST00000460822 RNF141Q8WVD5 230 aa4.09□□□□□ -1.76
HPS3-203ENST00000460822 SPATA9Q9BWV2 254 aa4.09□□□□□ -1.76
HPS3-203ENST00000460822 CARMIL2Q6F5E8 1435 aa4.08□□□□□ -1.76
HPS3-203ENST00000460822 CHURC1-FNTBB4DL54 471 aa4.08□□□□□ -1.76
HPS3-203ENST00000460822 IRS4O14654 1257 aaPredicted RBP4.08□□□□□ -1.76
HPS3-203ENST00000460822 TNFRSF10CO14798 259 aa4.08□□□□□ -1.76
HPS3-203ENST00000460822 ADCY3O60266 1144 aa4.08□□□□□ -1.76
HPS3-203ENST00000460822 CNGA1P29973 690 aa4.08□□□□□ -1.76
HPS3-203ENST00000460822 POLR2BP30876 1174 aaKnown RBP4.08□□□□□ -1.76
HPS3-203ENST00000460822 MLANAQ16655 118 aa4.08□□□□□ -1.76
HPS3-203ENST00000460822 CDCP2Q5VXM1 449 aa4.08□□□□□ -1.76
HPS3-203ENST00000460822 SLFN12Q8IYM2 578 aa4.08□□□□□ -1.76
HPS3-203ENST00000460822 LRRC47Q8N1G4 583 aaKnown RBP4.08□□□□□ -1.76
HPS3-203ENST00000460822 ZBTB38Q8NAP3 1195 aaPredicted RBP4.08□□□□□ -1.76
HPS3-203ENST00000460822 KLHL6Q8WZ60 621 aa4.08□□□□□ -1.76
HPS3-203ENST00000460822 CNNM2Q9H8M5 875 aa4.08□□□□□ -1.76
HPS3-203ENST00000460822 DUSP13Q9UII6 198 aa4.08□□□□□ -1.76
HPS3-203ENST00000460822 GLI1P08151 1106 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 PDGFRBP09619 1106 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 RAG1P15918 1043 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 LTKP29376 864 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 SLC7A5Q01650 507 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 GNPTABQ3T906 1256 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 ZNF648Q5T619 568 aaPredicted RBP4.07□□□□□ -1.76
HPS3-203ENST00000460822 NIM1KQ8IY84 436 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 BAHD1Q8TBE0 780 aaPredicted RBP4.07□□□□□ -1.76
HPS3-203ENST00000460822 MFSD3Q96ES6 412 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 ASPNQ9BXN1 380 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 FAM126AQ9BYI3 521 aaPredicted RBP4.07□□□□□ -1.76
HPS3-203ENST00000460822 FAM86C1Q9NVL1 165 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.07□□□□□ -1.76
HPS3-203ENST00000460822 MYCLP1P12525 358 aaPredicted RBP4.07□□□□□ -1.76
HPS3-203ENST00000460822 HK2P52789 917 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 CBX2Q14781 532 aaPredicted RBP4.07□□□□□ -1.76
HPS3-203ENST00000460822 LONRF2Q1L5Z9 754 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 TM4SF20Q53R12 229 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 KRT26Q7Z3Y9 468 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 FERMT3Q86UX7 667 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 JAMLQ86YT9 394 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 DHX37Q8IY37 1157 aaKnown RBP4.07□□□□□ -1.76
HPS3-203ENST00000460822 DTWD2Q8NBA8 298 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 PPP1R13LQ8WUF5 828 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 NINJ1Q92982 152 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 FAM84AQ96KN4 292 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 Q96M66 194 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 KREMEN1Q96MU8 473 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 KIF2CQ99661 725 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 GPR62Q9BZJ7 368 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 EPN3Q9H201 632 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 CHPF2Q9P2E5 772 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 ATP8A1Q9Y2Q0 1164 aa4.07□□□□□ -1.76
HPS3-203ENST00000460822 IQCA1LA6NCM1 817 aa4.06□□□□□ -1.76
HPS3-203ENST00000460822 L1CAMP32004 1257 aa4.06□□□□□ -1.76
HPS3-203ENST00000460822 STAT3P40763 770 aa4.06□□□□□ -1.76
HPS3-203ENST00000460822 CDKN1CP49918 316 aaPredicted RBP4.06□□□□□ -1.76
HPS3-203ENST00000460822 EVA1CP58658 441 aa4.06□□□□□ -1.76
HPS3-203ENST00000460822 RNF4P78317 190 aa4.06□□□□□ -1.76
HPS3-203ENST00000460822 EGR3Q06889 387 aa4.06□□□□□ -1.76
HPS3-203ENST00000460822 PABPC4Q13310 644 aaKnown RBP eCLIP4.06□□□□□ -1.76
HPS3-203ENST00000460822 ODR4Q5SWX8 454 aa4.06□□□□□ -1.76
HPS3-203ENST00000460822 TSPYL5Q86VY4 417 aaPredicted RBP4.06□□□□□ -1.76
HPS3-203ENST00000460822 THNSL2Q86YJ6 484 aa4.06□□□□□ -1.76
HPS3-203ENST00000460822 PRPF38AQ8NAV1 312 aaKnown RBP4.06□□□□□ -1.76
HPS3-203ENST00000460822 ABHD4Q8TB40 342 aa4.06□□□□□ -1.76
HPS3-203ENST00000460822 JDP2Q8WYK2 163 aa4.06□□□□□ -1.76
HPS3-203ENST00000460822 SLC26A8Q96RN1 970 aa4.06□□□□□ -1.76
HPS3-203ENST00000460822 IER2Q9BTL4 223 aa4.06□□□□□ -1.76
HPS3-203ENST00000460822 DUSP15Q9H1R2 295 aaPredicted RBP4.06□□□□□ -1.76
HPS3-203ENST00000460822 HOMER2Q9NSB8 354 aa4.06□□□□□ -1.76
HPS3-203ENST00000460822 TYW1Q9NV66 732 aaKnown RBP4.06□□□□□ -1.76
HPS3-203ENST00000460822 TMEM59LQ9UK28 342 aa4.06□□□□□ -1.76
HPS3-203ENST00000460822 ZNF214Q9UL59 606 aaPredicted RBP4.06□□□□□ -1.76
HPS3-203ENST00000460822 ARID4BQ4LE39 1312 aaPredicted RBP4.06□□□□□ -1.76
HPS3-203ENST00000460822 SSU72P8A0A1W2PR75 194 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 AGRPO00253 132 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 PDE8AO60658 829 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 ESR1P03372 595 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 SV2CQ496J9 727 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 CT47A1Q5JQC4 288 aaPredicted RBP4.05□□□□□ -1.76
HPS3-203ENST00000460822 YOD1Q5VVQ6 348 aaPredicted RBP4.05□□□□□ -1.76
HPS3-203ENST00000460822 FYB2Q5VWT5 728 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 FOXB2Q5VYV0 432 aa4.05□□□□□ -1.76
HPS3-203ENST00000460822 CHAC2Q8WUX2 184 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms