RNA–Protein interactions for RNA: ENST00000460781.1

CCDC93-204, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-204ENST00000460781 ADAM23O75077 832 aa4.84□□□□□ -1.63
CCDC93-204ENST00000460781 SNRPB2P08579 225 aaKnown RBP4.84□□□□□ -1.63
CCDC93-204ENST00000460781 HOXA10P31260 410 aaPredicted RBP4.84□□□□□ -1.63
CCDC93-204ENST00000460781 SNW1Q13573 536 aaKnown RBP4.84□□□□□ -1.63
CCDC93-204ENST00000460781 SLC14A2Q15849 920 aa4.84□□□□□ -1.63
CCDC93-204ENST00000460781 SLC10A6Q3KNW5 377 aa4.84□□□□□ -1.63
CCDC93-204ENST00000460781 CYB5RLQ6IPT4 315 aa4.84□□□□□ -1.63
CCDC93-204ENST00000460781 CRTC3Q6UUV7 619 aa4.84□□□□□ -1.63
CCDC93-204ENST00000460781 FAM214BQ7L5A3 538 aa4.84□□□□□ -1.63
CCDC93-204ENST00000460781 MICAL1Q8TDZ2 1067 aa4.84□□□□□ -1.63
CCDC93-204ENST00000460781 SGSM3Q96HU1 749 aa4.84□□□□□ -1.63
CCDC93-204ENST00000460781 RCC1LQ96I51 464 aaKnown RBP4.84□□□□□ -1.63
CCDC93-204ENST00000460781 AARSD1Q9BTE6 412 aaKnown RBP4.84□□□□□ -1.63
CCDC93-204ENST00000460781 HDAC8Q9BY41 377 aa4.84□□□□□ -1.63
CCDC93-204ENST00000460781 FOXP3Q9BZS1 431 aa4.84□□□□□ -1.63
CCDC93-204ENST00000460781 SLKQ9H2G2 1235 aaPredicted RBP4.84□□□□□ -1.63
CCDC93-204ENST00000460781 CARS2Q9HA77 564 aaKnown RBP4.84□□□□□ -1.63
CCDC93-204ENST00000460781 SLAMF8Q9P0V8 285 aa4.84□□□□□ -1.63
CCDC93-204ENST00000460781 ST14Q9Y5Y6 855 aa4.84□□□□□ -1.63
CCDC93-204ENST00000460781 AQRO60306 1485 aaKnown RBP eCLIP4.83□□□□□ -1.642e-6■■□□□ 14.3
CCDC93-204ENST00000460781 H0Y8X5 98 aa4.83□□□□□ -1.64
CCDC93-204ENST00000460781 CBFA2T2O43439 604 aa4.83□□□□□ -1.64
CCDC93-204ENST00000460781 TBC1D8O95759 1140 aa4.83□□□□□ -1.64
CCDC93-204ENST00000460781 BMP8BP34820 402 aa4.83□□□□□ -1.64
CCDC93-204ENST00000460781 SERINC3Q13530 473 aa4.83□□□□□ -1.64
CCDC93-204ENST00000460781 LRP8Q14114 963 aa4.83□□□□□ -1.64
CCDC93-204ENST00000460781 ZC3H12BQ5HYM0 836 aaKnown RBP4.83□□□□□ -1.64
CCDC93-204ENST00000460781 ZNF227Q86WZ6 799 aa4.83□□□□□ -1.64
CCDC93-204ENST00000460781 OXR1Q8N573 874 aa4.83□□□□□ -1.64
CCDC93-204ENST00000460781 ZSWIM2Q8NEG5 633 aa4.83□□□□□ -1.64
CCDC93-204ENST00000460781 BCL7CQ8WUZ0 217 aaPredicted RBP4.83□□□□□ -1.64
CCDC93-204ENST00000460781 VWCEQ96DN2 955 aa4.83□□□□□ -1.64
CCDC93-204ENST00000460781 CCDC140Q96MF4 163 aa4.83□□□□□ -1.64
CCDC93-204ENST00000460781 SLC26A8Q96RN1 970 aa4.83□□□□□ -1.64
CCDC93-204ENST00000460781 DNAJC7Q99615 494 aa4.83□□□□□ -1.64
CCDC93-204ENST00000460781 SPATA9Q9BWV2 254 aa4.83□□□□□ -1.64
CCDC93-204ENST00000460781 DUSP15Q9H1R2 295 aaPredicted RBP4.83□□□□□ -1.64
CCDC93-204ENST00000460781 LMCD1Q9NZU5 365 aa4.83□□□□□ -1.64
CCDC93-204ENST00000460781 PLAGL2Q9UPG8 496 aa4.83□□□□□ -1.64
CCDC93-204ENST00000460781 GPR55Q9Y2T6 319 aaPredicted RBP4.83□□□□□ -1.64
CCDC93-204ENST00000460781 PCDHA11Q9Y5I1 949 aa4.83□□□□□ -1.64
CCDC93-204ENST00000460781 BACE2Q9Y5Z0 518 aa4.83□□□□□ -1.64
CCDC93-204ENST00000460781 CNTNAP4Q9C0A0 1308 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 SHISA3A0PJX4 238 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 STXBP3O00186 592 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 MYO1BO43795 1136 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 CPP00450 1065 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 ITGAVP06756 1048 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 BNIP3Q12983 259 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 RASA3Q14644 834 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 MSMPQ1L6U9 139 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 EEF1DP3Q658K8 133 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 MRM1Q6IN84 353 aaKnown RBP4.82□□□□□ -1.64
CCDC93-204ENST00000460781 CYP2R1Q6VVX0 501 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 DTX1Q86Y01 620 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 TRIM59Q8IWR1 403 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 ARHGEF39Q8N4T4 335 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 LINC00116Q8NCU8 138 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 KCTD13Q8WZ19 329 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 APEX2Q9UBZ4 518 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 CCDC39Q9UFE4 941 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 EMC9Q9Y3B6 208 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 MSRB2Q9Y3D2 182 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 SYNJ1O43426 1573 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 ABCC8Q09428 1581 aa4.82□□□□□ -1.64
CCDC93-204ENST00000460781 SNAPC4Q5SXM2 1469 aa4.81□□□□□ -1.64
CCDC93-204ENST00000460781 PRNPP04156 253 aa4.81□□□□□ -1.64
CCDC93-204ENST00000460781 HOXC12P31275 282 aa4.81□□□□□ -1.64
CCDC93-204ENST00000460781 ECI1P42126 302 aa4.81□□□□□ -1.64
CCDC93-204ENST00000460781 CD97P48960 835 aa4.81□□□□□ -1.64
CCDC93-204ENST00000460781 CHRNEQ04844 493 aa4.81□□□□□ -1.64
CCDC93-204ENST00000460781 GTF2IRD2BQ6EKJ0 949 aa4.81□□□□□ -1.64
CCDC93-204ENST00000460781 GTF2IRD2Q86UP8 949 aa4.81□□□□□ -1.64
CCDC93-204ENST00000460781 HOMER1Q86YM7 354 aa4.81□□□□□ -1.64
CCDC93-204ENST00000460781 SPPL2CQ8IUH8 684 aa4.81□□□□□ -1.64
CCDC93-204ENST00000460781 THAP3Q8WTV1 239 aaPredicted RBP4.81□□□□□ -1.64
CCDC93-204ENST00000460781 BTN2A2Q8WVV5 523 aa4.81□□□□□ -1.64
CCDC93-204ENST00000460781 ALPK1Q96QP1 1244 aa4.81□□□□□ -1.64
CCDC93-204ENST00000460781 SEMA3GQ9NS98 782 aa4.81□□□□□ -1.64
CCDC93-204ENST00000460781 KIF13AQ9H1H9 1805 aa4.81□□□□□ -1.64
CCDC93-204ENST00000460781 CCDC163A0A0D9SF12 145 aa4.8□□□□□ -1.64
CCDC93-204ENST00000460781 FAM221BA6H8Z2 402 aa4.8□□□□□ -1.64
CCDC93-204ENST00000460781 C2orf71A6NGG8 1288 aa4.8□□□□□ -1.64
CCDC93-204ENST00000460781 KIAA1324LA8MWY0 1029 aaPredicted RBP4.8□□□□□ -1.64
CCDC93-204ENST00000460781 BIN1O00499 593 aa4.8□□□□□ -1.64
CCDC93-204ENST00000460781 SHOXO15266 292 aa4.8□□□□□ -1.64
CCDC93-204ENST00000460781 MEFVO15553 781 aaPredicted RBP4.8□□□□□ -1.64
CCDC93-204ENST00000460781 PRODHO43272 600 aa4.8□□□□□ -1.64
CCDC93-204ENST00000460781 VAMP4O75379 141 aa4.8□□□□□ -1.64
CCDC93-204ENST00000460781 CD8BP10966 210 aa4.8□□□□□ -1.64
CCDC93-204ENST00000460781 SRFP11831 508 aa4.8□□□□□ -1.64
CCDC93-204ENST00000460781 VAV1P15498 845 aa4.8□□□□□ -1.64
CCDC93-204ENST00000460781 PAMP19021 973 aa4.8□□□□□ -1.64
CCDC93-204ENST00000460781 PPP2R2AP63151 447 aa4.8□□□□□ -1.64
CCDC93-204ENST00000460781 SCRN1Q12765 414 aa4.8□□□□□ -1.64
CCDC93-204ENST00000460781 LAPTM5Q13571 262 aa4.8□□□□□ -1.64
CCDC93-204ENST00000460781 HLA-DQA1Q5Y7H0 255 aa4.8□□□□□ -1.64
CCDC93-204ENST00000460781 SLC23A3Q6PIS1 610 aa4.8□□□□□ -1.64
CCDC93-204ENST00000460781 NSMFQ6X4W1 530 aa4.8□□□□□ -1.64
CCDC93-204ENST00000460781 APPBP2Q92624 585 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms