RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 GINM1Q9NU53 330 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 HOXC10Q9NYD6 342 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ANGEL1Q9UNK9 670 aaKnown RBP6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 IPPQ9Y573 584 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 MROH7-TTC4A0A0A0MT08 1334 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 MROH7Q68CQ1 1323 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 MRC1P22897 1456 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 C16orf72Q14CZ0 275 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 KCNV1Q6PIU1 500 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 RUFY3Q7L099 469 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 RNF180Q86T96 592 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 TADA2BQ86TJ2 420 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 RPUSD2Q8IZ73 545 aaKnown RBP6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 AFAP1L2Q8N4X5 818 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ESYT2A0FGR8 921 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 MANSC4A6NHS7 340 aaPredicted RBP6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 KDM1AO60341 852 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 NPM3O75607 178 aaKnown RBP6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 PRPF6O94906 941 aaKnown RBP6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 INHBEP58166 350 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 RPS8P62241 208 aaKnown RBP6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 GABPAQ06546 454 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 HLTFQ14527 1009 aaKnown RBP eCLIP6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 VEPH1Q14D04 833 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ZSCAN26Q16670 478 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 MCMDC2Q4G0Z9 681 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 DNAJC21Q5F1R6 531 aaKnown RBP6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 NSMFQ6X4W1 530 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ATRIPQ8WXE1 791 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 SLC7A5P2Q9GIP4 190 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 USP40Q9NVE5 1235 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 IRAK4Q9NWZ3 460 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 DAPK3O43293 454 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 OPA1O60313 960 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 GBP6Q6ZN66 633 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CCDC144CPQ8IYA2 1237 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 KIF2CQ99661 725 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 STN1Q9H668 368 aaKnown RBP6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 TTF2Q9UNY4 1162 aaKnown RBP6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 WDR64B1ANS9 1081 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ATP2A1O14983 1001 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 HSPA4P34932 840 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CTCFP49711 727 aaPredicted RBP6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 KRT17Q04695 432 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ERCC6LQ2NKX8 1250 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 MTERF2Q49AM1 385 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ARHGAP15Q53QZ3 475 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 LMBRD2Q68DH5 695 aaPredicted RBP6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 POTEAQ6S8J7 498 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 THEM5Q8N1Q8 247 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 NLRP7Q8WX94 980 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CAPZA3Q96KX2 299 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 IFT122Q9HBG6 1241 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ASAP1Q9ULH1 1129 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 PI4KAP2A4QPH2 592 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 N4BP3O15049 544 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CIAO1O76071 339 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ZBTB7AO95365 584 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 GSPT1P15170 499 aaKnown RBP6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 GTF2A2P52657 109 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CKAP4Q07065 602 aaKnown RBP6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ARMCX5Q6P1M9 558 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 PI4KAP1Q8N8J0 262 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 FAM167AQ96KS9 214 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 IKBKGQ9Y6K9 419 aa6.91□□□□□ -1.3
HLA-DQA1-205ENST00000460633 TSPY1Q01534 308 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 NMIQ13287 307 aaPredicted RBP6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 BIRC3Q13489 604 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 USPL1Q5W0Q7 1092 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CREB3L3Q68CJ9 461 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 UBE3BQ7Z3V4 1068 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 RBM46Q8TBY0 533 aaKnown RBP6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CCT6BQ92526 530 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 EXOC1Q9NV70 894 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 NUB1Q9Y5A7 615 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 MYL3P08590 195 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 USP17L8P0C7I0 530 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 MYCLP12524 364 aaPredicted RBP6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 IARSP41252 1262 aaKnown RBP6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 SLC1A4P43007 532 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 BFSP2Q13515 415 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 USP17L2Q6R6M4 530 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 SNX14Q9Y5W7 946 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 PKD1L3Q7Z443 1732 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 TNNC2P02585 160 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ATP2A2P16615 1042 aaKnown RBP6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CCND2P30279 289 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 SSTR3P32745 418 aaPredicted RBP6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 HAND2P61296 217 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 KRT24Q2M2I5 525 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 FAM76AQ8TAV0 307 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 AFAP1L1Q8TED9 768 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 JARID2Q92833 1246 aaPredicted RBP6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 OPTNQ96CV9 577 aa6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 BAG1Q99933 345 aaPredicted RBP6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ARPP21Q9UBL0 812 aaPredicted RBP6.9□□□□□ -1.3
HLA-DQA1-205ENST00000460633 NRAPQ86VF7 1730 aa6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 KAT6BQ8WYB5 2073 aa6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 LOC102724159A0A0B4J2E5 919 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms