RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 DDR1Q08345 913 aa17.31■□□□□ 0.36
SSR4-206ENST00000460616 WDR59Q6PJI9 974 aa17.31■□□□□ 0.36
SSR4-206ENST00000460616 SPATS2Q86XZ4 545 aaKnown RBP17.31■□□□□ 0.36
SSR4-206ENST00000460616 NELFBQ8WX92 580 aa17.31■□□□□ 0.36
SSR4-206ENST00000460616 A1CFQ9NQ94 594 aaKnown RBP17.31■□□□□ 0.36
SSR4-206ENST00000460616 SRP68Q9UHB9 627 aaKnown RBP17.31■□□□□ 0.36
SSR4-206ENST00000460616 ATXN2Q99700 1313 aaKnown RBP17.31■□□□□ 0.36
SSR4-206ENST00000460616 MEFVO15553 781 aaPredicted RBP17.31■□□□□ 0.36
SSR4-206ENST00000460616 KIF1CO43896 1103 aaKnown RBP17.31■□□□□ 0.36
SSR4-206ENST00000460616 SF3B2Q13435 895 aaKnown RBP17.31■□□□□ 0.36
SSR4-206ENST00000460616 ALS2CLQ60I27 953 aa17.31■□□□□ 0.36
SSR4-206ENST00000460616 MMGT1Q8N4V1 131 aa17.31■□□□□ 0.36
SSR4-206ENST00000460616 HDAC7Q8WUI4 952 aa17.31■□□□□ 0.36
SSR4-206ENST00000460616 RUFY1Q96T51 708 aa17.31■□□□□ 0.36
SSR4-206ENST00000460616 LACRTQ9GZZ8 138 aa17.31■□□□□ 0.36
SSR4-206ENST00000460616 CAMTA2O94983 1202 aa17.3■□□□□ 0.36
SSR4-206ENST00000460616 FSBPO95073 299 aa17.3■□□□□ 0.36
SSR4-206ENST00000460616 MB21D1Q8N884 522 aa17.3■□□□□ 0.36
SSR4-206ENST00000460616 FERMT2Q96AC1 680 aa17.3■□□□□ 0.36
SSR4-206ENST00000460616 ARL8AQ96BM9 186 aa17.3■□□□□ 0.36
SSR4-206ENST00000460616 LRRC1Q9BTT6 524 aa17.3■□□□□ 0.36
SSR4-206ENST00000460616 CAPN11Q9UMQ6 739 aa17.3■□□□□ 0.36
SSR4-206ENST00000460616 RTCBQ9Y3I0 505 aaKnown RBP17.3■□□□□ 0.36
SSR4-206ENST00000460616 MYH8P13535 1937 aa17.3■□□□□ 0.36
SSR4-206ENST00000460616 PES1O00541 588 aaKnown RBP17.3■□□□□ 0.36
SSR4-206ENST00000460616 GPTP24298 496 aa17.3■□□□□ 0.36
SSR4-206ENST00000460616 PDCLQ13371 301 aa17.3■□□□□ 0.36
SSR4-206ENST00000460616 BANK1Q8NDB2 785 aa17.3■□□□□ 0.36
SSR4-206ENST00000460616 DMGDHQ9UI17 866 aaKnown RBP17.3■□□□□ 0.36
SSR4-206ENST00000460616 ABCC12Q96J65 1359 aa17.3■□□□□ 0.36
SSR4-206ENST00000460616 RCCD1A6NED2 376 aa17.29■□□□□ 0.36
SSR4-206ENST00000460616 FAM205CA6NFA0 338 aa17.29■□□□□ 0.36
SSR4-206ENST00000460616 HSF2BPO75031 334 aa17.29■□□□□ 0.36
SSR4-206ENST00000460616 IPO7O95373 1038 aaKnown RBP17.29■□□□□ 0.36
SSR4-206ENST00000460616 CYLC1P35663 651 aaPredicted RBP17.29■□□□□ 0.36
SSR4-206ENST00000460616 MCAMP43121 646 aa17.29■□□□□ 0.36
SSR4-206ENST00000460616 TTMPQ5BVD1 217 aa17.29■□□□□ 0.36
SSR4-206ENST00000460616 ARHGEF1Q92888 912 aaKnown RBP17.29■□□□□ 0.36
SSR4-206ENST00000460616 VPS54Q9P1Q0 977 aa17.29■□□□□ 0.36
SSR4-206ENST00000460616 DUSP10Q9Y6W6 482 aa17.29■□□□□ 0.36
SSR4-206ENST00000460616 IDH1O75874 414 aaKnown RBP17.29■□□□□ 0.36
SSR4-206ENST00000460616 CTDSPL2Q05D32 466 aa17.29■□□□□ 0.36
SSR4-206ENST00000460616 GIGYF2Q6Y7W6 1299 aaKnown RBP17.29■□□□□ 0.36
SSR4-206ENST00000460616 CREG2Q8IUH2 290 aa17.29■□□□□ 0.36
SSR4-206ENST00000460616 MAPK8IP1Q9UQF2 711 aa17.29■□□□□ 0.36
SSR4-206ENST00000460616 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.28■□□□□ 0.36
SSR4-206ENST00000460616 MACROD2A1Z1Q3 448 aa17.28■□□□□ 0.36
SSR4-206ENST00000460616 H7C1D1 291 aa17.28■□□□□ 0.36
SSR4-206ENST00000460616 ZEB2O60315 1214 aa17.28■□□□□ 0.36
SSR4-206ENST00000460616 PARP1P09874 1014 aaKnown RBP17.28■□□□□ 0.36
SSR4-206ENST00000460616 UBE3CQ15386 1083 aa17.28■□□□□ 0.36
SSR4-206ENST00000460616 MICALCLQ6ZW33 695 aa17.28■□□□□ 0.36
SSR4-206ENST00000460616 RUBCNQ92622 972 aa17.28■□□□□ 0.36
SSR4-206ENST00000460616 XDHP47989 1333 aa17.28■□□□□ 0.36
SSR4-206ENST00000460616 ZNF532Q9HCE3 1301 aa17.28■□□□□ 0.36
SSR4-206ENST00000460616 A0A1W2PQC6 194 aa17.28■□□□□ 0.36
SSR4-206ENST00000460616 EPHB4P54760 987 aa17.28■□□□□ 0.36
SSR4-206ENST00000460616 AKT1S1Q96B36 256 aa17.28■□□□□ 0.36
SSR4-206ENST00000460616 ZKSCAN3Q9BRR0 538 aa17.28■□□□□ 0.36
SSR4-206ENST00000460616 TACO1Q9BSH4 297 aaKnown RBP17.28■□□□□ 0.36
SSR4-206ENST00000460616 ZNHIT6Q9NWK9 470 aaKnown RBP17.28■□□□□ 0.36
SSR4-206ENST00000460616 ECM29Q5VYK3 1845 aa17.28■□□□□ 0.36
SSR4-206ENST00000460616 RDXP35241 583 aaKnown RBP17.27■□□□□ 0.36
SSR4-206ENST00000460616 BAG6P46379 1132 aa17.27■□□□□ 0.36
SSR4-206ENST00000460616 ATP1A2P50993 1020 aa17.27■□□□□ 0.36
SSR4-206ENST00000460616 SLC7A5Q01650 507 aa17.27■□□□□ 0.36
SSR4-206ENST00000460616 ZNF658Q5TYW1 1059 aaPredicted RBP17.27■□□□□ 0.36
SSR4-206ENST00000460616 EMBQ6PCB8 327 aa17.27■□□□□ 0.36
SSR4-206ENST00000460616 IRF2BP1Q8IU81 584 aa17.27■□□□□ 0.36
SSR4-206ENST00000460616 TSEN2Q8NCE0 465 aaKnown RBP17.27■□□□□ 0.36
SSR4-206ENST00000460616 GIMAP7Q8NHV1 300 aa17.27■□□□□ 0.36
SSR4-206ENST00000460616 STAG1Q8WVM7 1258 aa17.27■□□□□ 0.36
SSR4-206ENST00000460616 CNNM2Q9H8M5 875 aa17.27■□□□□ 0.36
SSR4-206ENST00000460616 NHEJ1Q9H9Q4 299 aaPredicted RBP17.27■□□□□ 0.36
SSR4-206ENST00000460616 FBXO3Q9UK99 471 aa17.27■□□□□ 0.36
SSR4-206ENST00000460616 SNX12Q9UMY4 172 aa17.27■□□□□ 0.36
SSR4-206ENST00000460616 LGALS16A8MUM7 142 aa17.27■□□□□ 0.35
SSR4-206ENST00000460616 MATR3P43243 847 aaKnown RBP eCLIP17.27■□□□□ 0.35
SSR4-206ENST00000460616 KIF5AQ12840 1032 aa17.27■□□□□ 0.35
SSR4-206ENST00000460616 TCIRG1Q13488 830 aa17.27■□□□□ 0.35
SSR4-206ENST00000460616 WTAPQ15007 396 aa17.27■□□□□ 0.35
SSR4-206ENST00000460616 MEA1Q16626 185 aa17.27■□□□□ 0.35
SSR4-206ENST00000460616 EARS2Q5JPH6 523 aaKnown RBP17.27■□□□□ 0.35
SSR4-206ENST00000460616 SPATA4Q8NEY3 305 aa17.27■□□□□ 0.35
SSR4-206ENST00000460616 CCDC85AQ96PX6 553 aaPredicted RBP17.27■□□□□ 0.35
SSR4-206ENST00000460616 STRBPQ96SI9 672 aaKnown RBP17.27■□□□□ 0.35
SSR4-206ENST00000460616 KRT23Q9C075 422 aa17.27■□□□□ 0.35
SSR4-206ENST00000460616 NID2Q14112 1375 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 CHUKO15111 745 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 BMP15O95972 392 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 MRPS25P82663 173 aaKnown RBP17.26■□□□□ 0.35
SSR4-206ENST00000460616 NNTQ13423 1086 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 ZNF174Q15697 407 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 RRP12Q5JTH9 1297 aaKnown RBP17.26■□□□□ 0.35
SSR4-206ENST00000460616 KCTD16Q68DU8 428 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 ILDR2Q71H61 639 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 YTHDF3Q7Z739 585 aaKnown RBP17.26■□□□□ 0.35
SSR4-206ENST00000460616 CCDC170Q8IYT3 715 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 FANCBQ8NB91 859 aa17.26■□□□□ 0.35
SSR4-206ENST00000460616 NUP133Q8WUM0 1156 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms