RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 GNAQP50148 359 aa26.15■■□□□ 1.78
C9orf3-209ENST00000460573 PPP2R5BQ15173 497 aa26.15■■□□□ 1.78
C9orf3-209ENST00000460573 SHCBP1Q8NEM2 672 aa26.15■■□□□ 1.78
C9orf3-209ENST00000460573 IL27Q8NEV9 243 aa26.15■■□□□ 1.78
C9orf3-209ENST00000460573 LZTS2Q9BRK4 669 aa26.15■■□□□ 1.78
C9orf3-209ENST00000460573 PNMA2Q9UL42 364 aa26.15■■□□□ 1.78
C9orf3-209ENST00000460573 KLF18A0A0U1RQI7 1052 aa26.14■■□□□ 1.78
C9orf3-209ENST00000460573 ZBTB43O43298 467 aa26.14■■□□□ 1.78
C9orf3-209ENST00000460573 SMARCA1P28370 1054 aa26.14■■□□□ 1.78
C9orf3-209ENST00000460573 STAT3P40763 770 aa26.14■■□□□ 1.78
C9orf3-209ENST00000460573 EVCP57679 992 aa26.14■■□□□ 1.78
C9orf3-209ENST00000460573 PLS1Q14651 629 aa26.14■■□□□ 1.78
C9orf3-209ENST00000460573 STAG2Q8N3U4 1231 aa26.14■■□□□ 1.78
C9orf3-209ENST00000460573 FANCBQ8NB91 859 aa26.14■■□□□ 1.78
C9orf3-209ENST00000460573 SLAIN1Q8ND83 568 aa26.14■■□□□ 1.78
C9orf3-209ENST00000460573 MYL10Q9BUA6 226 aa26.14■■□□□ 1.78
C9orf3-209ENST00000460573 TEX13BQ9BXU2 312 aa26.14■■□□□ 1.78
C9orf3-209ENST00000460573 UBA5Q9GZZ9 404 aa26.14■■□□□ 1.78
C9orf3-209ENST00000460573 RANBP17Q9H2T7 1088 aaKnown RBP26.14■■□□□ 1.78
C9orf3-209ENST00000460573 ZNF214Q9UL59 606 aaPredicted RBP26.14■■□□□ 1.78
C9orf3-209ENST00000460573 BRPF3Q9ULD4 1205 aa26.14■■□□□ 1.78
C9orf3-209ENST00000460573 TNRC18O15417 2968 aaPredicted RBP26.13■■□□□ 1.77
C9orf3-209ENST00000460573 PEX10O60683 326 aa26.13■■□□□ 1.77
C9orf3-209ENST00000460573 APOBRQ0VD83 1088 aa26.13■■□□□ 1.77
C9orf3-209ENST00000460573 ANKRD1Q15327 319 aa26.13■■□□□ 1.77
C9orf3-209ENST00000460573 RIOX2Q8IUF8 465 aa26.13■■□□□ 1.77
C9orf3-209ENST00000460573 MOV10L1Q9BXT6 1211 aaKnown RBP26.13■■□□□ 1.77
C9orf3-209ENST00000460573 MROH8Q9H579 483 aa26.13■■□□□ 1.77
C9orf3-209ENST00000460573 RBM28Q9NW13 759 aaKnown RBP26.13■■□□□ 1.77
C9orf3-209ENST00000460573 TOB2Q14106 344 aaPredicted RBP26.12■■□□□ 1.77
C9orf3-209ENST00000460573 MICU3Q86XE3 530 aa26.12■■□□□ 1.77
C9orf3-209ENST00000460573 ADGRF4Q8IZF3 695 aa26.12■■□□□ 1.77
C9orf3-209ENST00000460573 FLT3LGP49771 235 aa26.11■■□□□ 1.77
C9orf3-209ENST00000460573 NEK4P51957 841 aa26.11■■□□□ 1.77
C9orf3-209ENST00000460573 SNRNP48Q6IEG0 339 aaKnown RBP26.11■■□□□ 1.77
C9orf3-209ENST00000460573 TBC1D32Q96NH3 1257 aa26.11■■□□□ 1.77
C9orf3-209ENST00000460573 RAVER2Q9HCJ3 691 aaKnown RBP26.11■■□□□ 1.77
C9orf3-209ENST00000460573 GABRQQ9UN88 632 aa26.11■■□□□ 1.77
C9orf3-209ENST00000460573 HTTP42858 3142 aa26.11■■□□□ 1.77
C9orf3-209ENST00000460573 CCDC196A0A1B0GTZ2 297 aa26.1■■□□□ 1.77
C9orf3-209ENST00000460573 DHX16O60231 1041 aaKnown RBP26.1■■□□□ 1.77
C9orf3-209ENST00000460573 ADCY3O60266 1144 aa26.1■■□□□ 1.77
C9orf3-209ENST00000460573 ICAM1P05362 532 aa26.1■■□□□ 1.77
C9orf3-209ENST00000460573 TKFCQ3LXA3 575 aa26.1■■□□□ 1.77
C9orf3-209ENST00000460573 CPXCR1Q8N123 301 aa26.1■■□□□ 1.77
C9orf3-209ENST00000460573 RNF208Q9H0X6 261 aa26.1■■□□□ 1.77
C9orf3-209ENST00000460573 PORCNQ9H237 461 aa26.1■■□□□ 1.77
C9orf3-209ENST00000460573 RIOX1Q9H6W3 641 aa26.1■■□□□ 1.77
C9orf3-209ENST00000460573 CWC22Q9HCG8 908 aaKnown RBP26.1■■□□□ 1.77
C9orf3-209ENST00000460573 NAP1L2Q9ULW6 460 aaPredicted RBP26.1■■□□□ 1.77
C9orf3-209ENST00000460573 COL11A1P12107 1806 aaPredicted RBP26.09■■□□□ 1.77
C9orf3-209ENST00000460573 GOLGA8AA7E2F4 631 aa26.09■■□□□ 1.77
C9orf3-209ENST00000460573 GOLGA8BA8MQT2 603 aa26.09■■□□□ 1.77
C9orf3-209ENST00000460573 ERCC3P19447 782 aa26.09■■□□□ 1.77
C9orf3-209ENST00000460573 RXRAP19793 462 aa26.09■■□□□ 1.77
C9orf3-209ENST00000460573 METAP2P50579 478 aaKnown RBP eCLIP26.09■■□□□ 1.77
C9orf3-209ENST00000460573 MTFR1Q15390 333 aa26.09■■□□□ 1.77
C9orf3-209ENST00000460573 PLEKHH3Q7Z736 793 aa26.09■■□□□ 1.77
C9orf3-209ENST00000460573 ZNF274Q96GC6 653 aaPredicted RBP26.09■■□□□ 1.77
C9orf3-209ENST00000460573 KIF2CQ99661 725 aa26.09■■□□□ 1.77
C9orf3-209ENST00000460573 SPZ1Q9BXG8 430 aa26.09■■□□□ 1.77
C9orf3-209ENST00000460573 CPVLQ9H3G5 476 aa26.09■■□□□ 1.77
C9orf3-209ENST00000460573 JMJD4Q9H9V9 463 aa26.09■■□□□ 1.77
C9orf3-209ENST00000460573 ZNF536O15090 1300 aa26.09■■□□□ 1.77
C9orf3-209ENST00000460573 STRNO43815 780 aa26.08■■□□□ 1.77
C9orf3-209ENST00000460573 RTN1Q16799 776 aa26.08■■□□□ 1.77
C9orf3-209ENST00000460573 CCDC174Q6PII3 467 aa26.08■■□□□ 1.77
C9orf3-209ENST00000460573 GPR142Q7Z601 462 aa26.08■■□□□ 1.77
C9orf3-209ENST00000460573 NCAPG2Q86XI2 1143 aa26.08■■□□□ 1.77
C9orf3-209ENST00000460573 CCDC144CPQ8IYA2 1237 aa26.08■■□□□ 1.77
C9orf3-209ENST00000460573 CHST13Q8NET6 341 aa26.08■■□□□ 1.77
C9orf3-209ENST00000460573 MTMR8Q96EF0 704 aa26.08■■□□□ 1.77
C9orf3-209ENST00000460573 VAT1LQ9HCJ6 419 aa26.08■■□□□ 1.77
C9orf3-209ENST00000460573 FBXO40Q9UH90 709 aa26.08■■□□□ 1.77
C9orf3-209ENST00000460573 IVNS1ABPQ9Y6Y0 642 aa26.08■■□□□ 1.77
C9orf3-209ENST00000460573 NID2Q14112 1375 aa26.07■■□□□ 1.76
C9orf3-209ENST00000460573 CCL5P13501 91 aa26.07■■□□□ 1.76
C9orf3-209ENST00000460573 TRAF1Q13077 416 aa26.07■■□□□ 1.76
C9orf3-209ENST00000460573 RABEP1Q15276 862 aa26.07■■□□□ 1.76
C9orf3-209ENST00000460573 CDC37Q16543 378 aaPredicted RBP26.07■■□□□ 1.76
C9orf3-209ENST00000460573 WDR78Q5VTH9 848 aa26.07■■□□□ 1.76
C9orf3-209ENST00000460573 TMTC3Q6ZXV5 915 aa26.07■■□□□ 1.76
C9orf3-209ENST00000460573 RAB11FIP4Q86YS3 637 aa26.07■■□□□ 1.76
C9orf3-209ENST00000460573 CENPFP49454 3210 aa26.07■■□□□ 1.76
C9orf3-209ENST00000460573 PDIA3P30101 505 aaKnown RBP26.06■■□□□ 1.76
C9orf3-209ENST00000460573 AK2P54819 239 aa26.06■■□□□ 1.76
C9orf3-209ENST00000460573 SNAP25P60880 206 aa26.06■■□□□ 1.76
C9orf3-209ENST00000460573 ABRAQ8N0Z2 381 aa26.06■■□□□ 1.76
C9orf3-209ENST00000460573 AGBL1Q96MI9 1066 aa26.06■■□□□ 1.76
C9orf3-209ENST00000460573 CCPG1Q9ULG6 757 aa26.06■■□□□ 1.76
C9orf3-209ENST00000460573 DOCK3Q8IZD9 2030 aa26.05■■□□□ 1.76
C9orf3-209ENST00000460573 SLC15A5A6NIM6 579 aa26.05■■□□□ 1.76
C9orf3-209ENST00000460573 ZBTB5O15062 677 aa26.05■■□□□ 1.76
C9orf3-209ENST00000460573 ELNP15502 786 aa26.05■■□□□ 1.76
C9orf3-209ENST00000460573 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.05■■□□□ 1.76
C9orf3-209ENST00000460573 SRBD1Q8N5C6 995 aaKnown RBP26.05■■□□□ 1.76
C9orf3-209ENST00000460573 SOCS4Q8WXH5 440 aa26.05■■□□□ 1.76
C9orf3-209ENST00000460573 CYTH3O43739 400 aa26.04■■□□□ 1.76
C9orf3-209ENST00000460573 PLEKHA8P1O95397 391 aa26.04■■□□□ 1.76
C9orf3-209ENST00000460573 PTPREP23469 700 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms