RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 SSRP1Q08945 709 aaKnown RBP12.76□□□□□ -0.37
SMNDC1-203ENST00000460483 KIF22Q14807 665 aa12.76□□□□□ -0.37
SMNDC1-203ENST00000460483 TREML2Q5T2D2 321 aa12.76□□□□□ -0.37
SMNDC1-203ENST00000460483 GPAT2Q6NUI2 795 aa12.76□□□□□ -0.37
SMNDC1-203ENST00000460483 TMTC3Q6ZXV5 915 aa12.76□□□□□ -0.37
SMNDC1-203ENST00000460483 RNF26Q9BY78 433 aaPredicted RBP12.76□□□□□ -0.37
SMNDC1-203ENST00000460483 GLT8D2Q9H1C3 349 aa12.76□□□□□ -0.37
SMNDC1-203ENST00000460483 CWC22Q9HCG8 908 aaKnown RBP12.76□□□□□ -0.37
SMNDC1-203ENST00000460483 GPHNQ9NQX3 736 aaPredicted RBP12.76□□□□□ -0.37
SMNDC1-203ENST00000460483 FBXO40Q9UH90 709 aa12.76□□□□□ -0.37
SMNDC1-203ENST00000460483 FRMPD2Q68DX3 1309 aaPredicted RBP12.76□□□□□ -0.37
SMNDC1-203ENST00000460483 NID2Q14112 1375 aa12.76□□□□□ -0.37
SMNDC1-203ENST00000460483 ATP2A1O14983 1001 aa12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 TLR2O60603 784 aa12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 AOC2O75106 756 aa12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 GOLGA8HP0CJ92 632 aa12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 IFNAR1P17181 557 aa12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 CCT2P78371 535 aaKnown RBP12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 STK3Q13188 491 aa12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 TKFCQ3LXA3 575 aa12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 NOL8Q76FK4 1167 aaKnown RBP12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 CCDC144CPQ8IYA2 1237 aa12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 FAM43AQ8N2R8 423 aa12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 FAM184AQ8NB25 1140 aa12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 GPRC5AQ8NFJ5 357 aa12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 GTF3C6Q969F1 213 aa12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 NUP88Q99567 741 aaPredicted RBP12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 MYL10Q9BUA6 226 aa12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 AMNQ9BXJ7 453 aa12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 CFHR5Q9BXR6 569 aa12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 TEX13BQ9BXU2 312 aa12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 RIOX1Q9H6W3 641 aa12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 PRR12Q9ULL5 1215 aa12.75□□□□□ -0.37
SMNDC1-203ENST00000460483 PNMA6FA0A0J9YX94 578 aa12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 VWA5AO00534 786 aa12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 ZBTB5O15062 677 aa12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 DEXIO95424 95 aa12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 PSEN1P49768 467 aa12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 MOGSQ13724 837 aa12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 TRIM29Q14134 588 aa12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 ME3Q16798 604 aa12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 FAM110CQ1W6H9 321 aa12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 MCF2L2Q86YR7 1114 aa12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 ADGRF4Q8IZF3 695 aa12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 SAMD3Q8N6K7 520 aa12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 NKX2-3Q8TAU0 364 aa12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 INTS4Q96HW7 963 aaKnown RBP12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 TMX3Q96JJ7 454 aa12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 P2RX7Q99572 595 aaKnown RBP12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 RANBP17Q9H2T7 1088 aaKnown RBP12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 MROH8Q9H579 483 aa12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 SLC38A10Q9HBR0 1119 aa12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 SENP2Q9HC62 589 aa12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 VAT1LQ9HCJ6 419 aa12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 CIZ1Q9ULV3 898 aaPredicted RBP12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 ADAMTS5Q9UNA0 930 aa12.74□□□□□ -0.37
SMNDC1-203ENST00000460483 SPDYE16A6NNV3 312 aaPredicted RBP12.73□□□□□ -0.37
SMNDC1-203ENST00000460483 IGF2BP3O00425 579 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMNDC1-203ENST00000460483 PRPF3O43395 683 aaKnown RBP12.73□□□□□ -0.37
SMNDC1-203ENST00000460483 ICAM1P05362 532 aa12.73□□□□□ -0.37
SMNDC1-203ENST00000460483 RXRAP19793 462 aa12.73□□□□□ -0.37
SMNDC1-203ENST00000460483 PDCP20941 246 aa12.73□□□□□ -0.37
SMNDC1-203ENST00000460483 ADD1P35611 737 aaKnown RBP12.73□□□□□ -0.37
SMNDC1-203ENST00000460483 STAT3P40763 770 aa12.73□□□□□ -0.37
SMNDC1-203ENST00000460483 NOM1Q5C9Z4 860 aaKnown RBP12.73□□□□□ -0.37
SMNDC1-203ENST00000460483 MCTP2Q6DN12 878 aa12.73□□□□□ -0.37
SMNDC1-203ENST00000460483 FBXO11Q86XK2 927 aa12.73□□□□□ -0.37
SMNDC1-203ENST00000460483 CCDC148Q8NFR7 591 aa12.73□□□□□ -0.37
SMNDC1-203ENST00000460483 SPOCK2Q92563 424 aa12.73□□□□□ -0.37
SMNDC1-203ENST00000460483 PTPN18Q99952 460 aa12.73□□□□□ -0.37
SMNDC1-203ENST00000460483 UBA5Q9GZZ9 404 aa12.73□□□□□ -0.37
SMNDC1-203ENST00000460483 SLC5A4Q9NY91 659 aa12.73□□□□□ -0.37
SMNDC1-203ENST00000460483 HPS5Q9UPZ3 1129 aa12.73□□□□□ -0.37
SMNDC1-203ENST00000460483 MRPL11Q9Y3B7 192 aaKnown RBP12.73□□□□□ -0.37
SMNDC1-203ENST00000460483 IVNS1ABPQ9Y6Y0 642 aa12.73□□□□□ -0.37
SMNDC1-203ENST00000460483 ABCB11O95342 1321 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 STK36Q9NRP7 1315 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 FMNL1O95466 1100 aaPredicted RBP12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 CYP2C8P10632 490 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 MAPK4P31152 587 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 SLC16A2P36021 539 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 HTRA3P83110 453 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 SCRN1Q12765 414 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 PLS1Q14651 629 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 CDC37Q16543 378 aaPredicted RBP12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 KIAA1755Q5JYT7 1200 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 TTBK2Q6IQ55 1244 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 PPP1R18Q6NYC8 613 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 HOMER1Q86YM7 354 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 STAG2Q8N3U4 1231 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 CCDC82Q8N4S0 544 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 SRBD1Q8N5C6 995 aaKnown RBP12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 SHCBP1Q8NEM2 672 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 CHST13Q8NET6 341 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 BICD2Q8TD16 824 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 ATG4CQ96DT6 458 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 MPHOSPH6Q99547 160 aaKnown RBP12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 PAGR1Q9BTK6 254 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 SLC26A6Q9BXS9 759 aa12.72□□□□□ -0.37
SMNDC1-203ENST00000460483 JMJD4Q9H9V9 463 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms