RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 SH3GLB2Q9NR46 395 aa14.26□□□□□ -0.13
HDAC4-206ENST00000460235 FAM217BQ9NTX9 383 aaPredicted RBP14.26□□□□□ -0.13
HDAC4-206ENST00000460235 ORC3Q9UBD5 711 aaPredicted RBP14.26□□□□□ -0.13
HDAC4-206ENST00000460235 FBXO40Q9UH90 709 aa14.26□□□□□ -0.13
HDAC4-206ENST00000460235 ADAMTS5Q9UNA0 930 aa14.26□□□□□ -0.13
HDAC4-206ENST00000460235 PLEKHA8P1O95397 391 aa14.25□□□□□ -0.13
HDAC4-206ENST00000460235 ICAM1P05362 532 aa14.25□□□□□ -0.13
HDAC4-206ENST00000460235 NTRK3Q16288 839 aa14.25□□□□□ -0.13
HDAC4-206ENST00000460235 CDC37Q16543 378 aaPredicted RBP14.25□□□□□ -0.13
HDAC4-206ENST00000460235 GALNT17Q6IS24 598 aa14.25□□□□□ -0.13
HDAC4-206ENST00000460235 PPP1R18Q6NYC8 613 aa14.25□□□□□ -0.13
HDAC4-206ENST00000460235 HOMER1Q86YM7 354 aa14.25□□□□□ -0.13
HDAC4-206ENST00000460235 MCF2L2Q86YR7 1114 aa14.25□□□□□ -0.13
HDAC4-206ENST00000460235 CCDC82Q8N4S0 544 aa14.25□□□□□ -0.13
HDAC4-206ENST00000460235 GPRC5AQ8NFJ5 357 aa14.25□□□□□ -0.13
HDAC4-206ENST00000460235 MTMR8Q96EF0 704 aa14.25□□□□□ -0.13
HDAC4-206ENST00000460235 TEX13BQ9BXU2 312 aa14.25□□□□□ -0.13
HDAC4-206ENST00000460235 MRPL11Q9Y3B7 192 aaKnown RBP14.25□□□□□ -0.13
HDAC4-206ENST00000460235 ABCB11O95342 1321 aa14.24□□□□□ -0.13
HDAC4-206ENST00000460235 PTPDC1A2A3K4 754 aa14.24□□□□□ -0.13
HDAC4-206ENST00000460235 SPDYE16A6NNV3 312 aaPredicted RBP14.24□□□□□ -0.13
HDAC4-206ENST00000460235 CD2BP2O95400 341 aaKnown RBP14.24□□□□□ -0.13
HDAC4-206ENST00000460235 SCG2P13521 617 aa14.24□□□□□ -0.13
HDAC4-206ENST00000460235 CALML3P27482 149 aa14.24□□□□□ -0.13
HDAC4-206ENST00000460235 GNA11P29992 359 aa14.24□□□□□ -0.13
HDAC4-206ENST00000460235 STAT3P40763 770 aa14.24□□□□□ -0.13
HDAC4-206ENST00000460235 SAFBQ15424 915 aaKnown RBP eCLIP14.24□□□□□ -0.13
HDAC4-206ENST00000460235 PFKFB3Q16875 520 aaPredicted RBP14.24□□□□□ -0.13
HDAC4-206ENST00000460235 FAM43AQ8N2R8 423 aa14.24□□□□□ -0.13
HDAC4-206ENST00000460235 NSUN7Q8NE18 718 aaKnown RBP14.24□□□□□ -0.13
HDAC4-206ENST00000460235 BICD2Q8TD16 824 aa14.24□□□□□ -0.13
HDAC4-206ENST00000460235 ATG4CQ96DT6 458 aa14.24□□□□□ -0.13
HDAC4-206ENST00000460235 BRMS1Q9HCU9 246 aa14.24□□□□□ -0.13
HDAC4-206ENST00000460235 FBXO28Q9NVF7 368 aa14.24□□□□□ -0.13
HDAC4-206ENST00000460235 SAGE1Q9NXZ1 904 aa14.24□□□□□ -0.13
HDAC4-206ENST00000460235 MAP3K20Q9NYL2 800 aaKnown RBP14.24□□□□□ -0.13
HDAC4-206ENST00000460235 CCPG1Q9ULG6 757 aa14.24□□□□□ -0.13
HDAC4-206ENST00000460235 LOC285556D6RIA3 1793 aa14.24□□□□□ -0.13
HDAC4-206ENST00000460235 CNTNAP5Q8WYK1 1306 aa14.23□□□□□ -0.13
HDAC4-206ENST00000460235 TLR2O60603 784 aa14.23□□□□□ -0.13
HDAC4-206ENST00000460235 LARGE1O95461 756 aa14.23□□□□□ -0.13
HDAC4-206ENST00000460235 MRPL12P52815 198 aaKnown RBP14.23□□□□□ -0.13
HDAC4-206ENST00000460235 PLS1Q14651 629 aa14.23□□□□□ -0.13
HDAC4-206ENST00000460235 KIF22Q14807 665 aa14.23□□□□□ -0.13
HDAC4-206ENST00000460235 FAM110CQ1W6H9 321 aa14.23□□□□□ -0.13
HDAC4-206ENST00000460235 QRICH1Q2TAL8 776 aa14.23□□□□□ -0.13
HDAC4-206ENST00000460235 HEATR3Q7Z4Q2 680 aa14.23□□□□□ -0.13
HDAC4-206ENST00000460235 CPXCR1Q8N123 301 aa14.23□□□□□ -0.13
HDAC4-206ENST00000460235 SHCBP1Q8NEM2 672 aa14.23□□□□□ -0.13
HDAC4-206ENST00000460235 CHST13Q8NET6 341 aa14.23□□□□□ -0.13
HDAC4-206ENST00000460235 SMARCC2Q8TAQ2 1214 aa14.23□□□□□ -0.13
HDAC4-206ENST00000460235 CUL5Q93034 780 aa14.23□□□□□ -0.13
HDAC4-206ENST00000460235 PIGSQ96S52 555 aa14.23□□□□□ -0.13
HDAC4-206ENST00000460235 PTPN18Q99952 460 aa14.23□□□□□ -0.13
HDAC4-206ENST00000460235 CFHR5Q9BXR6 569 aa14.23□□□□□ -0.13
HDAC4-206ENST00000460235 MROH8Q9H579 483 aa14.23□□□□□ -0.13
HDAC4-206ENST00000460235 PCDHA1Q9Y5I3 950 aa14.23□□□□□ -0.13
HDAC4-206ENST00000460235 PTPRFP10586 1907 aa14.22□□□□□ -0.13
HDAC4-206ENST00000460235 IGF2BP3O00425 579 aaKnown RBP eCLIP14.22□□□□□ -0.13
HDAC4-206ENST00000460235 CYTH3O43739 400 aa14.22□□□□□ -0.13
HDAC4-206ENST00000460235 AOC2O75106 756 aa14.22□□□□□ -0.13
HDAC4-206ENST00000460235 FUT2Q10981 343 aa14.22□□□□□ -0.13
HDAC4-206ENST00000460235 DGKZQ13574 1117 aa14.22□□□□□ -0.13
HDAC4-206ENST00000460235 CCDC174Q6PII3 467 aa14.22□□□□□ -0.13
HDAC4-206ENST00000460235 NBPF11Q86T75 865 aa14.22□□□□□ -0.13
HDAC4-206ENST00000460235 RIOX2Q8IUF8 465 aa14.22□□□□□ -0.13
HDAC4-206ENST00000460235 PHKBQ93100 1093 aa14.22□□□□□ -0.13
HDAC4-206ENST00000460235 PAGR1Q9BTK6 254 aa14.22□□□□□ -0.13
HDAC4-206ENST00000460235 SPATC1LQ9H0A9 340 aa14.22□□□□□ -0.13
HDAC4-206ENST00000460235 C6orf50Q9HD87 102 aa14.22□□□□□ -0.13
HDAC4-206ENST00000460235 BARHL2Q9NY43 387 aa14.22□□□□□ -0.13
HDAC4-206ENST00000460235 MORF4L1Q9UBU8 362 aa14.22□□□□□ -0.13
HDAC4-206ENST00000460235 H3BQV1 296 aa14.21□□□□□ -0.13
HDAC4-206ENST00000460235 STRNO43815 780 aa14.21□□□□□ -0.13
HDAC4-206ENST00000460235 CYP2C8P10632 490 aa14.21□□□□□ -0.13
HDAC4-206ENST00000460235 MAPK4P31152 587 aa14.21□□□□□ -0.13
HDAC4-206ENST00000460235 NAPAP54920 295 aa14.21□□□□□ -0.13
HDAC4-206ENST00000460235 ERVK-9P63128 1117 aa14.21□□□□□ -0.13
HDAC4-206ENST00000460235 ERVK-24P63145 666 aa14.21□□□□□ -0.13
HDAC4-206ENST00000460235 IFFO2Q5TF58 517 aa14.21□□□□□ -0.13
HDAC4-206ENST00000460235 SNRNP48Q6IEG0 339 aaKnown RBP14.21□□□□□ -0.13
HDAC4-206ENST00000460235 CMTR1Q8N1G2 835 aaKnown RBP14.21□□□□□ -0.13
HDAC4-206ENST00000460235 PIBF1Q8WXW3 757 aa14.21□□□□□ -0.13
HDAC4-206ENST00000460235 DDX11Q96FC9 970 aa14.21□□□□□ -0.13
HDAC4-206ENST00000460235 C8orf76Q96K31 380 aa14.21□□□□□ -0.13
HDAC4-206ENST00000460235 MPHOSPH6Q99547 160 aaKnown RBP14.21□□□□□ -0.13
HDAC4-206ENST00000460235 ALG1Q9BT22 464 aa14.21□□□□□ -0.13
HDAC4-206ENST00000460235 EHMT1Q9H9B1 1298 aa14.21□□□□□ -0.13
HDAC4-206ENST00000460235 SLC5A4Q9NY91 659 aa14.21□□□□□ -0.13
HDAC4-206ENST00000460235 IVNS1ABPQ9Y6Y0 642 aa14.21□□□□□ -0.13
HDAC4-206ENST00000460235 ESYT2A0FGR8 921 aa14.2□□□□□ -0.14
HDAC4-206ENST00000460235 B4DLN1 442 aa14.2□□□□□ -0.14
HDAC4-206ENST00000460235 ALAS1P13196 640 aa14.2□□□□□ -0.14
HDAC4-206ENST00000460235 GJB2P29033 226 aa14.2□□□□□ -0.14
HDAC4-206ENST00000460235 NLRP5P59047 1200 aa14.2□□□□□ -0.14
HDAC4-206ENST00000460235 NOM1Q5C9Z4 860 aaKnown RBP14.2□□□□□ -0.14
HDAC4-206ENST00000460235 LARP1BQ659C4 914 aaKnown RBP14.2□□□□□ -0.14
HDAC4-206ENST00000460235 RASGRP2Q7LDG7 609 aa14.2□□□□□ -0.14
HDAC4-206ENST00000460235 ANKRD13CQ8N6S4 541 aa14.2□□□□□ -0.14
HDAC4-206ENST00000460235 IPO9Q96P70 1041 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms