RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 JMJD4Q9H9V9 463 aa11.91□□□□□ -0.5
GARNL3-211ENST00000460176 RNF186Q9NXI6 227 aa11.91□□□□□ -0.5
GARNL3-211ENST00000460176 HOXC10Q9NYD6 342 aa11.91□□□□□ -0.5
GARNL3-211ENST00000460176 RBBP6Q7Z6E9 1792 aaKnown RBP11.91□□□□□ -0.5
GARNL3-211ENST00000460176 CCDC196A0A1B0GTZ2 297 aa11.9□□□□□ -0.5
GARNL3-211ENST00000460176 VWA5AO00534 786 aa11.9□□□□□ -0.5
GARNL3-211ENST00000460176 CNMDO75829 334 aa11.9□□□□□ -0.5
GARNL3-211ENST00000460176 SNAP25P60880 206 aa11.9□□□□□ -0.5
GARNL3-211ENST00000460176 PIP4P2Q8N4L2 257 aa11.9□□□□□ -0.5
GARNL3-211ENST00000460176 SMCR8Q8TEV9 937 aaPredicted RBP11.9□□□□□ -0.5
GARNL3-211ENST00000460176 MTMR8Q96EF0 704 aa11.9□□□□□ -0.5
GARNL3-211ENST00000460176 TMX3Q96JJ7 454 aa11.9□□□□□ -0.5
GARNL3-211ENST00000460176 SPZ1Q9BXG8 430 aa11.9□□□□□ -0.5
GARNL3-211ENST00000460176 CFHR5Q9BXR6 569 aa11.9□□□□□ -0.5
GARNL3-211ENST00000460176 RANBP17Q9H2T7 1088 aaKnown RBP11.9□□□□□ -0.5
GARNL3-211ENST00000460176 SLC38A10Q9HBR0 1119 aa11.9□□□□□ -0.5
GARNL3-211ENST00000460176 TXNRD2Q9NNW7 524 aa11.9□□□□□ -0.5
GARNL3-211ENST00000460176 SH2B1Q9NRF2 756 aaPredicted RBP11.9□□□□□ -0.5
GARNL3-211ENST00000460176 BTBD7Q9P203 1132 aa11.9□□□□□ -0.5
GARNL3-211ENST00000460176 RBPJLQ9UBG7 517 aa11.9□□□□□ -0.5
GARNL3-211ENST00000460176 MGAMO43451 1857 aa11.89□□□□□ -0.51
GARNL3-211ENST00000460176 ZSWIM8A7E2V4 1837 aa11.89□□□□□ -0.51
GARNL3-211ENST00000460176 GTPBP6O43824 516 aaPredicted RBP11.89□□□□□ -0.51
GARNL3-211ENST00000460176 PEX10O60683 326 aa11.89□□□□□ -0.51
GARNL3-211ENST00000460176 CTDNEP1O95476 244 aa11.89□□□□□ -0.51
GARNL3-211ENST00000460176 IFNAR1P17181 557 aa11.89□□□□□ -0.51
GARNL3-211ENST00000460176 GCLCP48506 637 aaPredicted RBP11.89□□□□□ -0.51
GARNL3-211ENST00000460176 MAP2K1Q02750 393 aaPredicted RBP11.89□□□□□ -0.51
GARNL3-211ENST00000460176 TMEM132BQ14DG7 1078 aa11.89□□□□□ -0.51
GARNL3-211ENST00000460176 CCDC83Q8IWF9 413 aa11.89□□□□□ -0.51
GARNL3-211ENST00000460176 MB21D1Q8N884 522 aa11.89□□□□□ -0.51
GARNL3-211ENST00000460176 JMYQ8N9B5 988 aa11.89□□□□□ -0.51
GARNL3-211ENST00000460176 GTF3C2Q8WUA4 911 aaPredicted RBP11.89□□□□□ -0.51
GARNL3-211ENST00000460176 R3HDMLQ9H3Y0 253 aa11.89□□□□□ -0.51
GARNL3-211ENST00000460176 ZFYVE28Q9HCC9 887 aa11.89□□□□□ -0.51
GARNL3-211ENST00000460176 VAT1LQ9HCJ6 419 aa11.89□□□□□ -0.51
GARNL3-211ENST00000460176 SAGE1Q9NXZ1 904 aa11.89□□□□□ -0.51
GARNL3-211ENST00000460176 MORF4L1Q9UBU8 362 aa11.89□□□□□ -0.51
GARNL3-211ENST00000460176 BAZ2BQ9UIF8 2168 aaKnown RBP11.89□□□□□ -0.51
GARNL3-211ENST00000460176 SMCHD1A6NHR9 2005 aa11.89□□□□□ -0.51
GARNL3-211ENST00000460176 ZNF536O15090 1300 aa11.88□□□□□ -0.51
GARNL3-211ENST00000460176 ATP2A1O14983 1001 aa11.88□□□□□ -0.51
GARNL3-211ENST00000460176 DHX16O60231 1041 aaKnown RBP11.88□□□□□ -0.51
GARNL3-211ENST00000460176 TLR2O60603 784 aa11.88□□□□□ -0.51
GARNL3-211ENST00000460176 ZBED4O75132 1171 aa11.88□□□□□ -0.51
GARNL3-211ENST00000460176 TRPA1O75762 1119 aa11.88□□□□□ -0.51
GARNL3-211ENST00000460176 TBC1D8O95759 1140 aa11.88□□□□□ -0.51
GARNL3-211ENST00000460176 FDX1P10109 184 aa11.88□□□□□ -0.51
GARNL3-211ENST00000460176 PYGBP11216 843 aa11.88□□□□□ -0.51
GARNL3-211ENST00000460176 BCRP11274 1271 aa11.88□□□□□ -0.51
GARNL3-211ENST00000460176 CDC37Q16543 378 aaPredicted RBP11.88□□□□□ -0.51
GARNL3-211ENST00000460176 QRICH1Q2TAL8 776 aa11.88□□□□□ -0.51
GARNL3-211ENST00000460176 C17orf99Q6UX52 265 aa11.88□□□□□ -0.51
GARNL3-211ENST00000460176 CCDC82Q8N4S0 544 aa11.88□□□□□ -0.51
GARNL3-211ENST00000460176 PIGSQ96S52 555 aa11.88□□□□□ -0.51
GARNL3-211ENST00000460176 PAGR1Q9BTK6 254 aa11.88□□□□□ -0.51
GARNL3-211ENST00000460176 WBP1LQ9NX94 342 aa11.88□□□□□ -0.51
GARNL3-211ENST00000460176 CPA4Q9UI42 421 aa11.88□□□□□ -0.51
GARNL3-211ENST00000460176 ZNF214Q9UL59 606 aaPredicted RBP11.88□□□□□ -0.51
GARNL3-211ENST00000460176 RABGAP1Q9Y3P9 1069 aa11.88□□□□□ -0.51
GARNL3-211ENST00000460176 PLXNB2O15031 1838 aa11.88□□□□□ -0.51
GARNL3-211ENST00000460176 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.87□□□□□ -0.51
GARNL3-211ENST00000460176 K7ELQ4 463 aaPredicted RBP11.87□□□□□ -0.51
GARNL3-211ENST00000460176 PPP1R11O60927 126 aaPredicted RBP11.87□□□□□ -0.51
GARNL3-211ENST00000460176 DTNBO60941 627 aa11.87□□□□□ -0.51
GARNL3-211ENST00000460176 FMNL1O95466 1100 aaPredicted RBP11.87□□□□□ -0.51
GARNL3-211ENST00000460176 ERVK-9P63128 1117 aa11.87□□□□□ -0.51
GARNL3-211ENST00000460176 ERVK-24P63145 666 aa11.87□□□□□ -0.51
GARNL3-211ENST00000460176 Q3C1V9 767 aa11.87□□□□□ -0.51
GARNL3-211ENST00000460176 CCDC174Q6PII3 467 aa11.87□□□□□ -0.51
GARNL3-211ENST00000460176 POTEHQ6S545 545 aa11.87□□□□□ -0.51
GARNL3-211ENST00000460176 HOMER1Q86YM7 354 aa11.87□□□□□ -0.51
GARNL3-211ENST00000460176 ANKRD13CQ8N6S4 541 aa11.87□□□□□ -0.51
GARNL3-211ENST00000460176 NSUN7Q8NE18 718 aaKnown RBP11.87□□□□□ -0.51
GARNL3-211ENST00000460176 PIBF1Q8WXW3 757 aa11.87□□□□□ -0.51
GARNL3-211ENST00000460176 PHKBQ93100 1093 aa11.87□□□□□ -0.51
GARNL3-211ENST00000460176 RRP36Q96EU6 259 aaKnown RBP11.87□□□□□ -0.51
GARNL3-211ENST00000460176 ZFP91Q96JP5 570 aaPredicted RBP11.87□□□□□ -0.51
GARNL3-211ENST00000460176 RNF26Q9BY78 433 aaPredicted RBP11.87□□□□□ -0.51
GARNL3-211ENST00000460176 RAVER2Q9HCJ3 691 aaKnown RBP11.87□□□□□ -0.51
GARNL3-211ENST00000460176 STK36Q9NRP7 1315 aa11.86□□□□□ -0.51
GARNL3-211ENST00000460176 PNMA6FA0A0J9YX94 578 aa11.86□□□□□ -0.51
GARNL3-211ENST00000460176 hCG_1642624A0A1W2PR95 340 aa11.86□□□□□ -0.51
GARNL3-211ENST00000460176 CPLX1O14810 134 aa11.86□□□□□ -0.51
GARNL3-211ENST00000460176 ZBTB5O15062 677 aa11.86□□□□□ -0.51
GARNL3-211ENST00000460176 PRPF3O43395 683 aaKnown RBP11.86□□□□□ -0.51
GARNL3-211ENST00000460176 JAK2O60674 1132 aa11.86□□□□□ -0.51
GARNL3-211ENST00000460176 PPFIA3O75145 1194 aa11.86□□□□□ -0.51
GARNL3-211ENST00000460176 CDKL5O76039 1030 aa11.86□□□□□ -0.51
GARNL3-211ENST00000460176 ICAM1P05362 532 aa11.86□□□□□ -0.51
GARNL3-211ENST00000460176 PRKCSHP14314 528 aaPredicted RBP11.86□□□□□ -0.51
GARNL3-211ENST00000460176 TAL1P17542 331 aaPredicted RBP11.86□□□□□ -0.51
GARNL3-211ENST00000460176 OAZ1P54368 228 aa11.86□□□□□ -0.51
GARNL3-211ENST00000460176 CUL4AQ13619 759 aa11.86□□□□□ -0.51
GARNL3-211ENST00000460176 FAM110CQ1W6H9 321 aa11.86□□□□□ -0.51
GARNL3-211ENST00000460176 CPLX2Q6PUV4 134 aaKnown RBP11.86□□□□□ -0.51
GARNL3-211ENST00000460176 HSCBQ8IWL3 235 aa11.86□□□□□ -0.51
GARNL3-211ENST00000460176 CPXCR1Q8N123 301 aa11.86□□□□□ -0.51
GARNL3-211ENST00000460176 GPRC5AQ8NFJ5 357 aa11.86□□□□□ -0.51
GARNL3-211ENST00000460176 AGBL1Q96MI9 1066 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms