RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 ZSCAN23Q3MJ62 389 aa11.82□□□□□ -0.52
HERC4-207ENST00000460168 CDAN1Q8IWY9 1227 aa11.82□□□□□ -0.52
HERC4-207ENST00000460168 BICD2Q8TD16 824 aa11.82□□□□□ -0.52
HERC4-207ENST00000460168 CCDC97Q96F63 343 aaPredicted RBP11.82□□□□□ -0.52
HERC4-207ENST00000460168 PHF20Q9BVI0 1012 aa11.82□□□□□ -0.52
HERC4-207ENST00000460168 POLR3EQ9NVU0 708 aa11.82□□□□□ -0.52
HERC4-207ENST00000460168 RTEL1Q9NZ71 1219 aa11.82□□□□□ -0.52
HERC4-207ENST00000460168 RCOR1Q9UKL0 485 aa11.82□□□□□ -0.52
HERC4-207ENST00000460168 PAXBP1Q9Y5B6 917 aa11.82□□□□□ -0.52
HERC4-207ENST00000460168 DICER1Q9UPY3 1922 aaKnown RBP11.81□□□□□ -0.52
HERC4-207ENST00000460168 ME1P48163 572 aa11.81□□□□□ -0.52
HERC4-207ENST00000460168 NLRP5P59047 1200 aa11.81□□□□□ -0.52
HERC4-207ENST00000460168 RASA3Q14644 834 aa11.81□□□□□ -0.52
HERC4-207ENST00000460168 SF3A1Q15459 793 aaKnown RBP11.81□□□□□ -0.52
HERC4-207ENST00000460168 MIGA2Q7L4E1 593 aa11.81□□□□□ -0.52
HERC4-207ENST00000460168 HOMER1Q86YM7 354 aa11.81□□□□□ -0.52
HERC4-207ENST00000460168 GPC2Q8N158 579 aa11.81□□□□□ -0.52
HERC4-207ENST00000460168 ZNF710Q8N1W2 664 aa11.81□□□□□ -0.52
HERC4-207ENST00000460168 OXER1Q8TDS5 423 aa11.81□□□□□ -0.52
HERC4-207ENST00000460168 GPKOWQ92917 476 aaPredicted RBP eCLIP11.81□□□□□ -0.52
HERC4-207ENST00000460168 KDM4CQ9H3R0 1056 aa11.81□□□□□ -0.52
HERC4-207ENST00000460168 NYAP2Q9P242 653 aa11.81□□□□□ -0.52
HERC4-207ENST00000460168 SEC63Q9UGP8 760 aaKnown RBP11.81□□□□□ -0.52
HERC4-207ENST00000460168 CLIC4Q9Y696 253 aa11.81□□□□□ -0.52
HERC4-207ENST00000460168 SNHG28P0DPA3 235 aa11.8□□□□□ -0.52
HERC4-207ENST00000460168 VEGFAP15692 232 aaPredicted RBP11.8□□□□□ -0.52
HERC4-207ENST00000460168 ANO1Q5XXA6 986 aa11.8□□□□□ -0.52
HERC4-207ENST00000460168 HEATR3Q7Z4Q2 680 aa11.8□□□□□ -0.52
HERC4-207ENST00000460168 MYRIPQ8NFW9 859 aa11.8□□□□□ -0.52
HERC4-207ENST00000460168 KCNG4Q8TDN1 519 aa11.8□□□□□ -0.52
HERC4-207ENST00000460168 SHISA4Q96DD7 197 aa11.8□□□□□ -0.52
HERC4-207ENST00000460168 RRP36Q96EU6 259 aaKnown RBP11.8□□□□□ -0.52
HERC4-207ENST00000460168 CXorf56Q9H5V9 222 aa11.8□□□□□ -0.52
HERC4-207ENST00000460168 VAT1LQ9HCJ6 419 aa11.8□□□□□ -0.52
HERC4-207ENST00000460168 GPCPD1Q9NPB8 672 aa11.8□□□□□ -0.52
HERC4-207ENST00000460168 YEATS4O95619 227 aa11.8□□□□□ -0.52
HERC4-207ENST00000460168 ZNF543Q08ER8 600 aa11.8□□□□□ -0.52
HERC4-207ENST00000460168 SLC35G1Q2M3R5 365 aa11.8□□□□□ -0.52
HERC4-207ENST00000460168 GPATCH4Q5T3I0 446 aaKnown RBP11.8□□□□□ -0.52
HERC4-207ENST00000460168 LINC00301Q8NCQ3 95 aa11.8□□□□□ -0.52
HERC4-207ENST00000460168 PGBD1Q96JS3 809 aa11.8□□□□□ -0.52
HERC4-207ENST00000460168 UBA5Q9GZZ9 404 aa11.8□□□□□ -0.52
HERC4-207ENST00000460168 HACL1Q9UJ83 578 aa11.8□□□□□ -0.52
HERC4-207ENST00000460168 SBF1O95248 1867 aa11.8□□□□□ -0.52
HERC4-207ENST00000460168 PAX7P23759 505 aa11.79□□□□□ -0.52
HERC4-207ENST00000460168 SMARCA1P28370 1054 aa11.79□□□□□ -0.52
HERC4-207ENST00000460168 SLC1A4P43007 532 aa11.79□□□□□ -0.52
HERC4-207ENST00000460168 NASPP49321 788 aaPredicted RBP11.79□□□□□ -0.52
HERC4-207ENST00000460168 RRP1BQ14684 758 aaKnown RBP11.79□□□□□ -0.52
HERC4-207ENST00000460168 RILPL1Q5EBL4 403 aa11.79□□□□□ -0.52
HERC4-207ENST00000460168 CCDC148Q8NFR7 591 aa11.79□□□□□ -0.52
HERC4-207ENST00000460168 NUCKS1Q9H1E3 243 aaKnown RBP11.79□□□□□ -0.52
HERC4-207ENST00000460168 SH3GLB2Q9NR46 395 aa11.79□□□□□ -0.52
HERC4-207ENST00000460168 RNF181Q9P0P0 153 aa11.79□□□□□ -0.52
HERC4-207ENST00000460168 SYCE3A1L190 88 aa11.79□□□□□ -0.52
HERC4-207ENST00000460168 ANKRD33BA6NCL7 494 aa11.79□□□□□ -0.52
HERC4-207ENST00000460168 SPTLC2O15270 562 aa11.79□□□□□ -0.52
HERC4-207ENST00000460168 TBC1D12O60347 775 aa11.79□□□□□ -0.52
HERC4-207ENST00000460168 NEFHP12036 1026 aa11.79□□□□□ -0.52
HERC4-207ENST00000460168 YBX3P16989 372 aaKnown RBP eCLIP11.79□□□□□ -0.52
HERC4-207ENST00000460168 CALML3P27482 149 aa11.79□□□□□ -0.52
HERC4-207ENST00000460168 GSCP56915 257 aaPredicted RBP11.79□□□□□ -0.52
HERC4-207ENST00000460168 WWC2Q6AWC2 1192 aa11.79□□□□□ -0.52
HERC4-207ENST00000460168 KCTD1Q719H9 257 aa11.79□□□□□ -0.52
HERC4-207ENST00000460168 BARHL2Q9NY43 387 aa11.79□□□□□ -0.52
HERC4-207ENST00000460168 GPRC5DQ9NZD1 345 aa11.79□□□□□ -0.52
HERC4-207ENST00000460168 ASTN2O75129 1339 aaPredicted RBP11.78□□□□□ -0.52
HERC4-207ENST00000460168 JAG1P78504 1218 aa11.78□□□□□ -0.52
HERC4-207ENST00000460168 CCDC183Q5T5S1 534 aa11.78□□□□□ -0.52
HERC4-207ENST00000460168 PIK3R5Q8WYR1 880 aa11.78□□□□□ -0.52
HERC4-207ENST00000460168 PIGSQ96S52 555 aa11.78□□□□□ -0.52
HERC4-207ENST00000460168 RIOX1Q9H6W3 641 aa11.78□□□□□ -0.52
HERC4-207ENST00000460168 OGFRQ9NZT2 677 aa11.78□□□□□ -0.52
HERC4-207ENST00000460168 F5H6K3 240 aa11.78□□□□□ -0.52
HERC4-207ENST00000460168 ATP2B1P20020 1258 aa11.78□□□□□ -0.52
HERC4-207ENST00000460168 CD151P48509 253 aa11.78□□□□□ -0.52
HERC4-207ENST00000460168 NAPAP54920 295 aa11.78□□□□□ -0.52
HERC4-207ENST00000460168 KLRC3Q07444 240 aa11.78□□□□□ -0.52
HERC4-207ENST00000460168 NPY5RQ15761 445 aa11.78□□□□□ -0.52
HERC4-207ENST00000460168 SLFN13Q68D06 897 aa11.78□□□□□ -0.52
HERC4-207ENST00000460168 SIAH1Q8IUQ4 282 aa11.78□□□□□ -0.52
HERC4-207ENST00000460168 CCDC12Q8WUD4 166 aaPredicted RBP11.78□□□□□ -0.52
HERC4-207ENST00000460168 DEFB129Q9H1M3 183 aa11.78□□□□□ -0.52
HERC4-207ENST00000460168 ARHGEF10LQ9HCE6 1279 aa11.78□□□□□ -0.52
HERC4-207ENST00000460168 ZBTB21Q9ULJ3 1066 aa11.78□□□□□ -0.52
HERC4-207ENST00000460168 PCDHA7Q9UN72 937 aa11.78□□□□□ -0.52
HERC4-207ENST00000460168 STXBP3O00186 592 aa11.77□□□□□ -0.53
HERC4-207ENST00000460168 MARCKSP29966 332 aaPredicted RBP11.77□□□□□ -0.53
HERC4-207ENST00000460168 SLC39A14Q15043 492 aa11.77□□□□□ -0.53
HERC4-207ENST00000460168 ANGEL2Q5VTE6 544 aaKnown RBP11.77□□□□□ -0.53
HERC4-207ENST00000460168 ADALQ6DHV7 355 aa11.77□□□□□ -0.53
HERC4-207ENST00000460168 TYW1BQ6NUM6 668 aa11.77□□□□□ -0.53
HERC4-207ENST00000460168 DCAF4Q8WV16 495 aa11.77□□□□□ -0.53
HERC4-207ENST00000460168 RASSF4Q9H2L5 321 aa11.77□□□□□ -0.53
HERC4-207ENST00000460168 SUDS3Q9H7L9 328 aaPredicted RBP11.77□□□□□ -0.53
HERC4-207ENST00000460168 DACT1Q9NYF0 836 aa11.77□□□□□ -0.53
HERC4-207ENST00000460168 PGAP2Q9UHJ9 254 aa11.77□□□□□ -0.53
HERC4-207ENST00000460168 PCDHA4Q9UN74 947 aa11.77□□□□□ -0.53
HERC4-207ENST00000460168 DDNO94850 711 aaPredicted RBP11.76□□□□□ -0.53
HERC4-207ENST00000460168 SLC16A2P36021 539 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms