RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 ANKRD18AQ8IVF6 992 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 TRMT44Q8IYL2 757 aaKnown RBP6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 C4orf32Q8N8J7 132 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 EHBP1Q8NDI1 1231 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 NUP133Q8WUM0 1156 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 CNKSR1Q969H4 720 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 SHISA4Q96DD7 197 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 EPSTI1Q96J88 318 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 AK8Q96MA6 479 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 NLRP3Q96P20 1036 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 DNAJC7Q99615 494 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 LZTS2Q9BRK4 669 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 ZKSCAN3Q9BRR0 538 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 CRNKL1Q9BZJ0 848 aaKnown RBP6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 FHDC1Q9C0D6 1143 aaPredicted RBP6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 PDGFDQ9GZP0 370 aaPredicted RBP6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 TMX4Q9H1E5 349 aaPredicted RBP6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 ABHD10Q9NUJ1 306 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 TCP11L1Q9NUJ3 509 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 VPS54Q9P1Q0 977 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 PIM2Q9P1W9 311 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 ARPP21Q9UBL0 812 aaPredicted RBP6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 SRP68Q9UHB9 627 aaKnown RBP6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 CAPN11Q9UMQ6 739 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 L1RE1Q9UN81 338 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 V9GY48 417 aaPredicted RBP6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 XDHP47989 1333 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 DDX60LQ5H9U9 1706 aaKnown RBP6.9□□□□□ -1.31
UBQLN4-202ENST00000459954 MYH4Q9Y623 1939 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 ANO9A1A5B4 782 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 TARSL2A2RTX5 802 aaKnown RBP6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 CTAGE15A4D2H0 777 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 SOWAHDA6NJG2 315 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 LGALS16A8MUM7 142 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 MINDY4BA8MYZ0 360 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 KCNJ18B7U540 433 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 M0R2N6 131 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 PSMD14O00487 310 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 N4BP3O15049 544 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 SASH3O75995 380 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 RHOBTB3O94955 611 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 RPN1P04843 607 aaKnown RBP6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 CTAGE8P0CG41 777 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 NPR1P16066 1061 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 OAS2P29728 719 aaKnown RBP6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 CASP14P31944 242 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 AFMP43652 599 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 FXR1P51114 621 aaKnown RBP eCLIP6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 NLRP5P59047 1200 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 KRT83P78385 493 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 AMPD2Q01433 879 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 ITIH3Q06033 890 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 GOLGA8FQ08AF8 430 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 GOLGA8DPQ0D2H9 430 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 KCNJ12Q14500 433 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 MEA1Q16626 185 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 KIF4BQ2VIQ3 1234 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 ZNF569Q5MCW4 686 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 RRAGBQ5VZM2 374 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 PAPD7Q5XG87 772 aaKnown RBP6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 SPTY2D1Q68D10 685 aaPredicted RBP6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 STYK1Q6J9G0 422 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 CTAGE6Q86UF2 777 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 FAM114A1Q8IWE2 563 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 CTAGE4Q8IX94 777 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 GRAMD1CQ8IYS0 662 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 CCDC170Q8IYT3 715 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 BLIDQ8IZY5 108 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 ADSSL1Q8N142 457 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 SRBD1Q8N5C6 995 aaKnown RBP6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 CCDC148Q8NFR7 591 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 OR8K1Q8NGG5 319 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 CCDC47Q96A33 483 aaKnown RBP6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 MASTLQ96GX5 879 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 DHTKD1Q96HY7 919 aaPredicted RBP6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 ANKRD2Q9GZV1 360 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 VPS33BQ9H267 617 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 ANKZF1Q9H8Y5 726 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 MED4Q9NPJ6 270 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 SEC31BQ9NQW1 1179 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 KBTBD4Q9NVX7 518 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 CWC15Q9P013 229 aaKnown RBP6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 ABCB11O95342 1321 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 ROBO3Q96MS0 1386 aa6.89□□□□□ -1.31
UBQLN4-202ENST00000459954 COL1A1P02452 1464 aaPredicted RBP6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 C10orf71Q711Q0 1435 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 A0A1W2PQJ5 194 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 BICDL2A1A5D9 508 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 PSMA7O14818 248 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 BBOX1O75936 387 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 CLSTN1O94985 981 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 NDUFA10O95299 355 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 PLEKHA8P1O95397 391 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 PARP1P09874 1014 aaKnown RBP6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 PRLRP16471 622 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 HOXA10P31260 410 aaPredicted RBP6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 KRT9P35527 623 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 CYLC1P35663 651 aaPredicted RBP6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 ARHGAP25P42331 645 aa6.88□□□□□ -1.31
UBQLN4-202ENST00000459954 ERVK-24P63145 666 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms