RNA–Protein interactions for RNA: ENST00000459873.1

PCCB-202, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-202ENST00000459873 OTOP1Q7RTM1 612 aa10.67□□□□□ -0.7
PCCB-202ENST00000459873 CTU1Q7Z7A3 348 aaKnown RBP10.67□□□□□ -0.7
PCCB-202ENST00000459873 NBPF11Q86T75 865 aa10.67□□□□□ -0.7
PCCB-202ENST00000459873 CCDC144CPQ8IYA2 1237 aa10.67□□□□□ -0.7
PCCB-202ENST00000459873 ADGRF4Q8IZF3 695 aa10.67□□□□□ -0.7
PCCB-202ENST00000459873 NUP133Q8WUM0 1156 aa10.67□□□□□ -0.7
PCCB-202ENST00000459873 ALDH8A1Q9H2A2 487 aaPredicted RBP10.67□□□□□ -0.7
PCCB-202ENST00000459873 EFCC1Q9HA90 598 aa10.67□□□□□ -0.7
PCCB-202ENST00000459873 PDRG1Q9NUG6 133 aa10.67□□□□□ -0.7
PCCB-202ENST00000459873 BAZ2BQ9UIF8 2168 aaKnown RBP10.66□□□□□ -0.7
PCCB-202ENST00000459873 ZBED4O75132 1171 aa10.66□□□□□ -0.7
PCCB-202ENST00000459873 GNRH1P01148 92 aa10.66□□□□□ -0.7
PCCB-202ENST00000459873 ERCC3P19447 782 aa10.66□□□□□ -0.7
PCCB-202ENST00000459873 PSMC4P43686 418 aa10.66□□□□□ -0.7
PCCB-202ENST00000459873 METAP2P50579 478 aaKnown RBP eCLIP10.66□□□□□ -0.7
PCCB-202ENST00000459873 AK2P54819 239 aa10.66□□□□□ -0.7
PCCB-202ENST00000459873 SNAP25P60880 206 aa10.66□□□□□ -0.7
PCCB-202ENST00000459873 GRB14Q14449 540 aa10.66□□□□□ -0.7
PCCB-202ENST00000459873 PLS1Q14651 629 aa10.66□□□□□ -0.7
PCCB-202ENST00000459873 KIF22Q14807 665 aa10.66□□□□□ -0.7
PCCB-202ENST00000459873 RTN1Q16799 776 aa10.66□□□□□ -0.7
PCCB-202ENST00000459873 QRICH1Q2TAL8 776 aa10.66□□□□□ -0.7
PCCB-202ENST00000459873 CCDC174Q6PII3 467 aa10.66□□□□□ -0.7
PCCB-202ENST00000459873 GPR142Q7Z601 462 aa10.66□□□□□ -0.7
PCCB-202ENST00000459873 SOCS4Q8WXH5 440 aa10.66□□□□□ -0.7
PCCB-202ENST00000459873 UBA5Q9GZZ9 404 aa10.66□□□□□ -0.7
PCCB-202ENST00000459873 RIOX1Q9H6W3 641 aa10.66□□□□□ -0.7
PCCB-202ENST00000459873 JMJD4Q9H9V9 463 aa10.66□□□□□ -0.7
PCCB-202ENST00000459873 RAVER2Q9HCJ3 691 aaKnown RBP10.66□□□□□ -0.7
PCCB-202ENST00000459873 FAM217BQ9NTX9 383 aaPredicted RBP10.66□□□□□ -0.7
PCCB-202ENST00000459873 RBM28Q9NW13 759 aaKnown RBP10.66□□□□□ -0.7
PCCB-202ENST00000459873 RIPK3Q9Y572 518 aa10.66□□□□□ -0.7
PCCB-202ENST00000459873 ZNFX1Q9P2E3 1918 aaKnown RBP10.65□□□□□ -0.7
PCCB-202ENST00000459873 PPP1R11O60927 126 aaPredicted RBP10.65□□□□□ -0.7
PCCB-202ENST00000459873 LARGE1O95461 756 aa10.65□□□□□ -0.7
PCCB-202ENST00000459873 SLC25A27O95847 323 aa10.65□□□□□ -0.7
PCCB-202ENST00000459873 CDC27P30260 824 aa10.65□□□□□ -0.7
PCCB-202ENST00000459873 STAT3P40763 770 aa10.65□□□□□ -0.7
PCCB-202ENST00000459873 PRKCZQ05513 592 aa10.65□□□□□ -0.7
PCCB-202ENST00000459873 FUT2Q10981 343 aa10.65□□□□□ -0.7
PCCB-202ENST00000459873 SRBD1Q8N5C6 995 aaKnown RBP10.65□□□□□ -0.7
PCCB-202ENST00000459873 FANCBQ8NB91 859 aa10.65□□□□□ -0.7
PCCB-202ENST00000459873 AGBL1Q96MI9 1066 aa10.65□□□□□ -0.7
PCCB-202ENST00000459873 MROH8Q9H579 483 aa10.65□□□□□ -0.7
PCCB-202ENST00000459873 RNF146Q9NTX7 359 aa10.65□□□□□ -0.7
PCCB-202ENST00000459873 SRRDQ9UH36 339 aa10.65□□□□□ -0.7
PCCB-202ENST00000459873 CCPG1Q9ULG6 757 aa10.65□□□□□ -0.7
PCCB-202ENST00000459873 TRIM17Q9Y577 477 aa10.65□□□□□ -0.7
PCCB-202ENST00000459873 ZBTB5O15062 677 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 DHX16O60231 1041 aaKnown RBP10.64□□□□□ -0.71
PCCB-202ENST00000459873 ECM2O94769 699 aaPredicted RBP10.64□□□□□ -0.71
PCCB-202ENST00000459873 FMNL1O95466 1100 aaPredicted RBP10.64□□□□□ -0.71
PCCB-202ENST00000459873 SMARCA1P28370 1054 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 PDIA3P30101 505 aaKnown RBP10.64□□□□□ -0.71
PCCB-202ENST00000459873 GNAQP50148 359 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 NEK4P51957 841 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 RABEP1Q15276 862 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 ANKRD1Q15327 319 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 TKFCQ3LXA3 575 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 MORN1Q5T089 497 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 SYNE3Q6ZMZ3 975 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 PLEKHH3Q7Z736 793 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 NCAPG2Q86XI2 1143 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 HOMER1Q86YM7 354 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 ABRAQ8N0Z2 381 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 CPXCR1Q8N123 301 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 CMTR1Q8N1G2 835 aaKnown RBP10.64□□□□□ -0.71
PCCB-202ENST00000459873 USP6NLQ92738 828 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 ZNF274Q96GC6 653 aaPredicted RBP10.64□□□□□ -0.71
PCCB-202ENST00000459873 PIGSQ96S52 555 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 APBA2Q99767 749 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 LZTS2Q9BRK4 669 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 ACAD9Q9H845 621 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 HOMER2Q9NSB8 354 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 TPCN1Q9ULQ1 816 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 GABRQQ9UN88 632 aa10.64□□□□□ -0.71
PCCB-202ENST00000459873 CTDP1Q9Y5B0 961 aaPredicted RBP10.64□□□□□ -0.71
PCCB-202ENST00000459873 ABCB11O95342 1321 aa10.63□□□□□ -0.71
PCCB-202ENST00000459873 MCM3APO60318 1980 aa10.63□□□□□ -0.71
PCCB-202ENST00000459873 NFIBO00712 420 aa10.63□□□□□ -0.71
PCCB-202ENST00000459873 ALAS1P13196 640 aa10.63□□□□□ -0.71
PCCB-202ENST00000459873 PTPREP23469 700 aa10.63□□□□□ -0.71
PCCB-202ENST00000459873 ADORA2AP29274 412 aa10.63□□□□□ -0.71
PCCB-202ENST00000459873 PRMT2P55345 433 aa10.63□□□□□ -0.71
PCCB-202ENST00000459873 ST3GAL1Q11201 340 aa10.63□□□□□ -0.71
PCCB-202ENST00000459873 IRF5Q13568 498 aa10.63□□□□□ -0.71
PCCB-202ENST00000459873 ARHGEF6Q15052 776 aa10.63□□□□□ -0.71
PCCB-202ENST00000459873 PPP2R5BQ15173 497 aa10.63□□□□□ -0.71
PCCB-202ENST00000459873 USH1GQ495M9 461 aa10.63□□□□□ -0.71
PCCB-202ENST00000459873 MUM1L1Q5H9M0 696 aa10.63□□□□□ -0.71
PCCB-202ENST00000459873 WDR78Q5VTH9 848 aa10.63□□□□□ -0.71
PCCB-202ENST00000459873 CHST13Q8NET6 341 aa10.63□□□□□ -0.71
PCCB-202ENST00000459873 CLEC4DQ8WXI8 215 aa10.63□□□□□ -0.71
PCCB-202ENST00000459873 GTF3C6Q969F1 213 aa10.63□□□□□ -0.71
PCCB-202ENST00000459873 COA7Q96BR5 231 aa10.63□□□□□ -0.71
PCCB-202ENST00000459873 NCOA5Q9HCD5 579 aaKnown RBP10.63□□□□□ -0.71
PCCB-202ENST00000459873 A1CFQ9NQ94 594 aaKnown RBP10.63□□□□□ -0.71
PCCB-202ENST00000459873 FBXO40Q9UH90 709 aa10.63□□□□□ -0.71
PCCB-202ENST00000459873 GJD2Q9UKL4 321 aa10.63□□□□□ -0.71
PCCB-202ENST00000459873 PNMA2Q9UL42 364 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms