RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 ZNF865P0CJ78 1059 aaPredicted RBP11.79□□□□□ -0.52
HDLBP-228ENST00000459788 MCCP23508 829 aa11.79□□□□□ -0.52
HDLBP-228ENST00000459788 RNF180Q86T96 592 aa11.79□□□□□ -0.52
HDLBP-228ENST00000459788 C7orf61Q8IZ16 206 aa11.79□□□□□ -0.52
HDLBP-228ENST00000459788 CPXCR1Q8N123 301 aa11.79□□□□□ -0.52
HDLBP-228ENST00000459788 ANKS1AQ92625 1134 aa11.79□□□□□ -0.52
HDLBP-228ENST00000459788 CNNM2Q9H8M5 875 aa11.79□□□□□ -0.52
HDLBP-228ENST00000459788 RAVER2Q9HCJ3 691 aaKnown RBP11.79□□□□□ -0.52
HDLBP-228ENST00000459788 FAM184BQ9ULE4 1060 aa11.79□□□□□ -0.52
HDLBP-228ENST00000459788 PHF24Q9UPV7 400 aa11.79□□□□□ -0.52
HDLBP-228ENST00000459788 TACC3Q9Y6A5 838 aa11.79□□□□□ -0.52
HDLBP-228ENST00000459788 ZNF536O15090 1300 aa11.79□□□□□ -0.52
HDLBP-228ENST00000459788 LRRC37A2A6NM11 1700 aa11.78□□□□□ -0.52
HDLBP-228ENST00000459788 ASB14A6NK59 587 aa11.78□□□□□ -0.52
HDLBP-228ENST00000459788 ICAM1P05362 532 aa11.78□□□□□ -0.52
HDLBP-228ENST00000459788 SNHG28P0DPA3 235 aa11.78□□□□□ -0.52
HDLBP-228ENST00000459788 NKX3-2P78367 333 aa11.78□□□□□ -0.52
HDLBP-228ENST00000459788 IKQ13123 557 aaPredicted RBP11.78□□□□□ -0.52
HDLBP-228ENST00000459788 LRRC41Q15345 812 aa11.78□□□□□ -0.52
HDLBP-228ENST00000459788 LRRC26Q2I0M4 334 aa11.78□□□□□ -0.52
HDLBP-228ENST00000459788 GPATCH4Q5T3I0 446 aaKnown RBP11.78□□□□□ -0.52
HDLBP-228ENST00000459788 CWC27Q6UX04 472 aaKnown RBP11.78□□□□□ -0.52
HDLBP-228ENST00000459788 IQCA1Q86XH1 822 aa11.78□□□□□ -0.52
HDLBP-228ENST00000459788 FAM133AQ8N9E0 248 aa11.78□□□□□ -0.52
HDLBP-228ENST00000459788 RUFY2Q8WXA3 655 aa11.78□□□□□ -0.52
HDLBP-228ENST00000459788 TMEM47Q9BQJ4 181 aa11.78□□□□□ -0.52
HDLBP-228ENST00000459788 SENP6Q9GZR1 1112 aaPredicted RBP11.78□□□□□ -0.52
HDLBP-228ENST00000459788 RANBP17Q9H2T7 1088 aaKnown RBP11.78□□□□□ -0.52
HDLBP-228ENST00000459788 XPNPEP3Q9NQH7 507 aa11.78□□□□□ -0.52
HDLBP-228ENST00000459788 TOMM22Q9NS69 142 aa11.78□□□□□ -0.52
HDLBP-228ENST00000459788 PRR12Q9ULL5 1215 aa11.78□□□□□ -0.52
HDLBP-228ENST00000459788 WDR19Q8NEZ3 1342 aa11.78□□□□□ -0.52
HDLBP-228ENST00000459788 MOXD2PA6NHM9 499 aa11.77□□□□□ -0.53
HDLBP-228ENST00000459788 NMT2O60551 498 aa11.77□□□□□ -0.53
HDLBP-228ENST00000459788 DUSP11O75319 330 aaKnown RBP11.77□□□□□ -0.53
HDLBP-228ENST00000459788 SNAI1O95863 264 aaPredicted RBP11.77□□□□□ -0.53
HDLBP-228ENST00000459788 CST5P28325 142 aaPredicted RBP11.77□□□□□ -0.53
HDLBP-228ENST00000459788 IMMTQ16891 758 aaKnown RBP11.77□□□□□ -0.53
HDLBP-228ENST00000459788 TTC22Q5TAA0 569 aa11.77□□□□□ -0.53
HDLBP-228ENST00000459788 SLC39A5Q6ZMH5 540 aa11.77□□□□□ -0.53
HDLBP-228ENST00000459788 KCTD1Q719H9 257 aa11.77□□□□□ -0.53
HDLBP-228ENST00000459788 SEZ6LQ9BYH1 1024 aa11.77□□□□□ -0.53
HDLBP-228ENST00000459788 KRT23Q9C075 422 aa11.77□□□□□ -0.53
HDLBP-228ENST00000459788 INCENPQ9NQS7 918 aa11.77□□□□□ -0.53
HDLBP-228ENST00000459788 RNF146Q9NTX7 359 aa11.77□□□□□ -0.53
HDLBP-228ENST00000459788 POTEB2H3BUK9 544 aa11.76□□□□□ -0.53
HDLBP-228ENST00000459788 PDHBP11177 359 aa11.76□□□□□ -0.53
HDLBP-228ENST00000459788 ZNF543Q08ER8 600 aa11.76□□□□□ -0.53
HDLBP-228ENST00000459788 ACVR2BQ13705 512 aa11.76□□□□□ -0.53
HDLBP-228ENST00000459788 LRIT3Q3SXY7 679 aa11.76□□□□□ -0.53
HDLBP-228ENST00000459788 RRP12Q5JTH9 1297 aaKnown RBP11.76□□□□□ -0.53
HDLBP-228ENST00000459788 PRAMEF19Q5SWL8 479 aa11.76□□□□□ -0.53
HDLBP-228ENST00000459788 GJC2Q5T442 439 aaPredicted RBP11.76□□□□□ -0.53
HDLBP-228ENST00000459788 SYDE2Q5VT97 1194 aa11.76□□□□□ -0.53
HDLBP-228ENST00000459788 TBC1D10CQ8IV04 446 aa11.76□□□□□ -0.53
HDLBP-228ENST00000459788 PCSK9Q8NBP7 692 aaKnown RBP11.76□□□□□ -0.53
HDLBP-228ENST00000459788 TRERF1Q96PN7 1200 aa11.76□□□□□ -0.53
HDLBP-228ENST00000459788 UPF3AQ9H1J1 476 aaKnown RBP11.76□□□□□ -0.53
HDLBP-228ENST00000459788 SPC25Q9HBM1 224 aa11.76□□□□□ -0.53
HDLBP-228ENST00000459788 A1CFQ9NQ94 594 aaKnown RBP11.76□□□□□ -0.53
HDLBP-228ENST00000459788 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.76□□□□□ -0.53
HDLBP-228ENST00000459788 ADD3Q9UEY8 706 aaKnown RBP11.76□□□□□ -0.53
HDLBP-228ENST00000459788 PRKAG2Q9UGJ0 569 aa11.76□□□□□ -0.53
HDLBP-228ENST00000459788 LAMA3Q16787 3333 aa11.75□□□□□ -0.53
HDLBP-228ENST00000459788 SZT2Q5T011 3432 aa11.75□□□□□ -0.53
HDLBP-228ENST00000459788 ADAMTS4O75173 837 aa11.75□□□□□ -0.53
HDLBP-228ENST00000459788 RTP1P59025 263 aa11.75□□□□□ -0.53
HDLBP-228ENST00000459788 HAND2P61296 217 aa11.75□□□□□ -0.53
HDLBP-228ENST00000459788 CCDC96Q2M329 555 aa11.75□□□□□ -0.53
HDLBP-228ENST00000459788 ARMCX2Q7L311 632 aa11.75□□□□□ -0.53
HDLBP-228ENST00000459788 RGS22Q8NE09 1264 aa11.75□□□□□ -0.53
HDLBP-228ENST00000459788 KLHDC9Q8NEP7 349 aa11.75□□□□□ -0.53
HDLBP-228ENST00000459788 MORC4Q8TE76 937 aa11.75□□□□□ -0.53
HDLBP-228ENST00000459788 NUP133Q8WUM0 1156 aa11.75□□□□□ -0.53
HDLBP-228ENST00000459788 FGD4Q96M96 766 aa11.75□□□□□ -0.53
HDLBP-228ENST00000459788 AGBL1Q96MI9 1066 aa11.75□□□□□ -0.53
HDLBP-228ENST00000459788 TOX2Q96NM4 488 aa11.75□□□□□ -0.53
HDLBP-228ENST00000459788 MPHOSPH6Q99547 160 aaKnown RBP11.75□□□□□ -0.53
HDLBP-228ENST00000459788 CYP39A1Q9NYL5 469 aa11.75□□□□□ -0.53
HDLBP-228ENST00000459788 CCPG1Q9ULG6 757 aa11.75□□□□□ -0.53
HDLBP-228ENST00000459788 ISY1Q9ULR0 285 aaKnown RBP11.75□□□□□ -0.53
HDLBP-228ENST00000459788 Q9Y3F1 56 aa11.75□□□□□ -0.53
HDLBP-228ENST00000459788 KIAA1217Q5T5P2 1943 aa11.74□□□□□ -0.53
HDLBP-228ENST00000459788 ALAS1P13196 640 aa11.74□□□□□ -0.53
HDLBP-228ENST00000459788 TAL1P17542 331 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-228ENST00000459788 PDE4AP27815 886 aa11.74□□□□□ -0.53
HDLBP-228ENST00000459788 ADCYAP1R1P41586 468 aa11.74□□□□□ -0.53
HDLBP-228ENST00000459788 MAGEA10P43363 369 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-228ENST00000459788 GJA9P57773 515 aa11.74□□□□□ -0.53
HDLBP-228ENST00000459788 ASPRV1Q53RT3 343 aa11.74□□□□□ -0.53
HDLBP-228ENST00000459788 CCSAPQ6IQ19 270 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-228ENST00000459788 TDHQ8IZJ6 230 aa11.74□□□□□ -0.53
HDLBP-228ENST00000459788 ZSCAN10Q96SZ4 725 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-228ENST00000459788 LBHD1Q9BQE6 289 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-228ENST00000459788 KATNBL1Q9H079 304 aa11.74□□□□□ -0.53
HDLBP-228ENST00000459788 VTA1Q9NP79 307 aa11.74□□□□□ -0.53
HDLBP-228ENST00000459788 ZMYND8Q9ULU4 1186 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-228ENST00000459788 ELP1O95163 1332 aa11.74□□□□□ -0.53
HDLBP-228ENST00000459788 NEDD4P46934 1319 aa11.74□□□□□ -0.53
HDLBP-228ENST00000459788 MROH7Q68CQ1 1323 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms