RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 CDC23Q9UJX2 597 aa23.26■■□□□ 1.31
CRAT-207ENST00000458362 TFRCP02786 760 aaKnown RBP23.25■■□□□ 1.31
CRAT-207ENST00000458362 PPP4CP60510 307 aa23.25■■□□□ 1.31
CRAT-207ENST00000458362 CCDC148Q8NFR7 591 aa23.25■■□□□ 1.31
CRAT-207ENST00000458362 STX8Q9UNK0 236 aa23.25■■□□□ 1.31
CRAT-207ENST00000458362 UBA7P41226 1012 aa23.25■■□□□ 1.31
CRAT-207ENST00000458362 CHMP4BP1P59074 171 aa23.25■■□□□ 1.31
CRAT-207ENST00000458362 TRIM14Q14142 442 aa23.25■■□□□ 1.31
CRAT-207ENST00000458362 CHP1Q99653 195 aa23.25■■□□□ 1.31
CRAT-207ENST00000458362 SLF1Q9BQI6 1058 aa23.25■■□□□ 1.31
CRAT-207ENST00000458362 CCSER1Q9C0I3 900 aa23.25■■□□□ 1.31
CRAT-207ENST00000458362 KBTBD4Q9NVX7 518 aa23.25■■□□□ 1.31
CRAT-207ENST00000458362 RTCBQ9Y3I0 505 aaKnown RBP23.25■■□□□ 1.31
CRAT-207ENST00000458362 KCNB1Q14721 858 aa23.24■■□□□ 1.31
CRAT-207ENST00000458362 CCDC178Q5BJE1 867 aa23.24■■□□□ 1.31
CRAT-207ENST00000458362 SNED1Q8TER0 1413 aa23.24■■□□□ 1.31
CRAT-207ENST00000458362 BAG3O95817 575 aa23.24■■□□□ 1.31
CRAT-207ENST00000458362 GSTO1P78417 241 aa23.24■■□□□ 1.31
CRAT-207ENST00000458362 GRAPQ13588 217 aa23.24■■□□□ 1.31
CRAT-207ENST00000458362 KIF4BQ2VIQ3 1234 aa23.24■■□□□ 1.31
CRAT-207ENST00000458362 GALNT17Q6IS24 598 aa23.24■■□□□ 1.31
CRAT-207ENST00000458362 MB21D1Q8N884 522 aa23.24■■□□□ 1.31
CRAT-207ENST00000458362 GRAPLQ8TC17 118 aaPredicted RBP23.24■■□□□ 1.31
CRAT-207ENST00000458362 UBXN6Q9BZV1 441 aa23.24■■□□□ 1.31
CRAT-207ENST00000458362 CCNL1Q9UK58 526 aaPredicted RBP23.24■■□□□ 1.31
CRAT-207ENST00000458362 LEMD3Q9Y2U8 911 aa23.24■■□□□ 1.31
CRAT-207ENST00000458362 FLT1P17948 1338 aa23.23■■□□□ 1.31
CRAT-207ENST00000458362 DDX60LQ5H9U9 1706 aaKnown RBP23.23■■□□□ 1.31
CRAT-207ENST00000458362 KLRF2D3W0D1 207 aa23.23■■□□□ 1.31
CRAT-207ENST00000458362 ATP8B1O43520 1251 aa23.23■■□□□ 1.31
CRAT-207ENST00000458362 RTFDC1Q9BY42 306 aaPredicted RBP23.23■■□□□ 1.31
CRAT-207ENST00000458362 REXO2Q9Y3B8 237 aaKnown RBP23.23■■□□□ 1.31
CRAT-207ENST00000458362 TTC26A0AVF1 554 aa23.22■■□□□ 1.31
CRAT-207ENST00000458362 CTAGE9A4FU28 777 aa23.22■■□□□ 1.31
CRAT-207ENST00000458362 LGALS16A8MUM7 142 aa23.22■■□□□ 1.31
CRAT-207ENST00000458362 RHOBTB3O94955 611 aa23.22■■□□□ 1.31
CRAT-207ENST00000458362 VPS72Q15906 364 aa23.22■■□□□ 1.31
CRAT-207ENST00000458362 AMOTL1Q8IY63 956 aa23.22■■□□□ 1.31
CRAT-207ENST00000458362 ZNF507Q8TCN5 953 aa23.22■■□□□ 1.31
CRAT-207ENST00000458362 FAM182BQ5T319 152 aa23.22■■□□□ 1.31
CRAT-207ENST00000458362 GIMAP8Q8ND71 665 aaPredicted RBP23.22■■□□□ 1.31
CRAT-207ENST00000458362 PLCG1P19174 1290 aa23.21■■□□□ 1.31
CRAT-207ENST00000458362 PRPHP41219 470 aa23.21■■□□□ 1.31
CRAT-207ENST00000458362 TTI2Q6NXR4 508 aa23.21■■□□□ 1.31
CRAT-207ENST00000458362 ANKZF1Q9H8Y5 726 aa23.21■■□□□ 1.31
CRAT-207ENST00000458362 ARFGAP3Q9NP61 516 aa23.21■■□□□ 1.31
CRAT-207ENST00000458362 TRIM47Q96LD4 638 aa23.21■■□□□ 1.31
CRAT-207ENST00000458362 DUSP9Q99956 384 aaKnown RBP23.21■■□□□ 1.31
CRAT-207ENST00000458362 ZMYND12Q9H0C1 365 aa23.21■■□□□ 1.31
CRAT-207ENST00000458362 THAP9Q9H5L6 903 aa23.21■■□□□ 1.31
CRAT-207ENST00000458362 TAF1LQ8IZX4 1826 aa23.2■■□□□ 1.3
CRAT-207ENST00000458362 LAD1O00515 517 aa23.2■■□□□ 1.3
CRAT-207ENST00000458362 BTDP43251 543 aa23.2■■□□□ 1.3
CRAT-207ENST00000458362 CDK8P49336 464 aa23.2■■□□□ 1.3
CRAT-207ENST00000458362 NAPAP54920 295 aa23.2■■□□□ 1.3
CRAT-207ENST00000458362 ZNF804AQ7Z570 1209 aa23.2■■□□□ 1.3
CRAT-207ENST00000458362 CEP112Q8N8E3 955 aa23.2■■□□□ 1.3
CRAT-207ENST00000458362 SPZ1Q9BXG8 430 aa23.2■■□□□ 1.3
CRAT-207ENST00000458362 FUT8Q9BYC5 575 aa23.2■■□□□ 1.3
CRAT-207ENST00000458362 TRIM10Q9UDY6 481 aa23.2■■□□□ 1.3
CRAT-207ENST00000458362 EEF1GP26641 437 aaKnown RBP23.2■■□□□ 1.3
CRAT-207ENST00000458362 TXNRD1Q16881 649 aa23.2■■□□□ 1.3
CRAT-207ENST00000458362 CABP7Q86V35 215 aa23.2■■□□□ 1.3
CRAT-207ENST00000458362 EYA3Q99504 573 aa23.2■■□□□ 1.3
CRAT-207ENST00000458362 NAPGQ99747 312 aaPredicted RBP23.2■■□□□ 1.3
CRAT-207ENST00000458362 LZTS2Q9BRK4 669 aa23.2■■□□□ 1.3
CRAT-207ENST00000458362 PSMA7O14818 248 aa23.19■■□□□ 1.3
CRAT-207ENST00000458362 POLR3GO15318 223 aaPredicted RBP23.19■■□□□ 1.3
CRAT-207ENST00000458362 MYL1P05976 194 aa23.19■■□□□ 1.3
CRAT-207ENST00000458362 LDHCP07864 332 aa23.19■■□□□ 1.3
CRAT-207ENST00000458362 GPSM2P81274 684 aa23.19■■□□□ 1.3
CRAT-207ENST00000458362 LETM2Q2VYF4 491 aa23.19■■□□□ 1.3
CRAT-207ENST00000458362 USP17L2Q6R6M4 530 aa23.19■■□□□ 1.3
CRAT-207ENST00000458362 EPN1Q9Y6I3 576 aaPredicted RBP23.19■■□□□ 1.3
CRAT-207ENST00000458362 PES1O00541 588 aaKnown RBP23.19■■□□□ 1.3
CRAT-207ENST00000458362 NDUFA10O95299 355 aa23.19■■□□□ 1.3
CRAT-207ENST00000458362 OR52Z1P0C646 297 aa23.19■■□□□ 1.3
CRAT-207ENST00000458362 C16orf86Q6ZW13 317 aa23.19■■□□□ 1.3
CRAT-207ENST00000458362 OR8K1Q8NGG5 319 aa23.19■■□□□ 1.3
CRAT-207ENST00000458362 DNAJC7Q99615 494 aa23.19■■□□□ 1.3
CRAT-207ENST00000458362 A0A1W2PQC6 194 aa23.18■■□□□ 1.3
CRAT-207ENST00000458362 CCNT1O60563 726 aaKnown RBP23.18■■□□□ 1.3
CRAT-207ENST00000458362 STIM1Q13586 685 aa23.18■■□□□ 1.3
CRAT-207ENST00000458362 LONRF2Q1L5Z9 754 aa23.18■■□□□ 1.3
CRAT-207ENST00000458362 EEF2KMTQ96G04 330 aa23.18■■□□□ 1.3
CRAT-207ENST00000458362 PNKPQ96T60 521 aa23.18■■□□□ 1.3
CRAT-207ENST00000458362 SMCO2A6NFE2 343 aa23.17■■□□□ 1.3
CRAT-207ENST00000458362 B4DLN1 442 aa23.17■■□□□ 1.3
CRAT-207ENST00000458362 TUBB2AQ13885 445 aa23.17■■□□□ 1.3
CRAT-207ENST00000458362 NONOQ15233 471 aaKnown RBP eCLIP23.17■■□□□ 1.3
CRAT-207ENST00000458362 JAKMIP3Q5VZ66 844 aa23.17■■□□□ 1.3
CRAT-207ENST00000458362 WDR59Q6PJI9 974 aa23.17■■□□□ 1.3
CRAT-207ENST00000458362 KRT25Q7Z3Z0 450 aa23.17■■□□□ 1.3
CRAT-207ENST00000458362 C8orf37Q96NL8 207 aa23.17■■□□□ 1.3
CRAT-207ENST00000458362 TUBB2BQ9BVA1 445 aa23.17■■□□□ 1.3
CRAT-207ENST00000458362 CAPN11Q9UMQ6 739 aa23.17■■□□□ 1.3
CRAT-207ENST00000458362 NHSQ6T4R5 1651 aa23.17■■□□□ 1.3
CRAT-207ENST00000458362 CCDC151A5D8V7 595 aa23.17■■□□□ 1.3
CRAT-207ENST00000458362 BRD3Q15059 726 aa23.17■■□□□ 1.3
CRAT-207ENST00000458362 TEX11Q8IYF3 940 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms