RNA–Protein interactions for RNA: ENST00000458304.2

SPARCL1-204, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-204ENST00000458304 DLC1Q96QB1 1528 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 YTHDC2Q9H6S0 1430 aaKnown RBP5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 BRD4O60885 1362 aaPredicted RBP5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 PLEKHG1Q9ULL1 1385 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 CGNL1Q0VF96 1302 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 ZBTB42B2RXF5 422 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 DDAH1O94760 285 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 MAP3K6O95382 1288 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 EGFRP00533 1210 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 BAG6P46379 1132 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 SARSP49591 514 aaKnown RBP5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 CASP7P55210 303 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 WDR43Q15061 677 aaKnown RBP eCLIP5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 LONRF2Q1L5Z9 754 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 CCDC93Q567U6 631 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 ZC3H12BQ5HYM0 836 aaKnown RBP5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 FBXW10Q5XX13 1052 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 CXorf57Q6NSI4 855 aaKnown RBP5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 GET4Q7L5D6 327 aaPredicted RBP5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 NLRP13Q86W25 1043 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 TREML1Q86YW5 311 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 CREBRFQ8IUR6 639 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 GOLM1Q8NBJ4 401 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 PPHLN1Q8NEY8 458 aaKnown RBP5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 PNMA5Q96PV4 448 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 STRBPQ96SI9 672 aaKnown RBP5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 YIPF4Q9BSR8 244 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 MUC3BQ9H195 1237 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 TNKS2Q9H2K2 1166 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 PNNQ9H307 717 aaKnown RBP5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 IFT122Q9HBG6 1241 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 ZFYVE28Q9HCC9 887 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 STK26Q9P289 416 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 ASAP1Q9ULH1 1129 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 USP20Q9Y2K6 914 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 RTCBQ9Y3I0 505 aaKnown RBP5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 RABGAP1Q9Y3P9 1069 aa5.84□□□□□ -1.47
SPARCL1-204ENST00000458304 NSD2O96028 1365 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 LRPPRCP42704 1394 aaKnown RBP5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 PIK3R4Q99570 1358 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 ARHGEF28Q8N1W1 1705 aaKnown RBP5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 ANO9A1A5B4 782 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 ADAM23O75077 832 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 HIP1RO75146 1068 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 PF4P02776 101 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 U2AF1L5P0DN76 240 aaPredicted RBP5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 ZSCAN20P17040 1043 aaPredicted RBP5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 TARSP26639 723 aaKnown RBP5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 HALP42357 657 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 U2AF1Q01081 240 aaKnown RBP eCLIP5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 CBX2Q14781 532 aaPredicted RBP5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 MAP3K11Q16584 847 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 SEZ6Q53EL9 994 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 HYIQ5T013 277 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 DDX46Q7L014 1031 aaKnown RBP5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 C3orf58Q8NDZ4 430 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 WDR66Q8TBY9 1149 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 ANKRD24Q8TF21 1146 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 JPH3Q8WXH2 748 aaPredicted RBP5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 SKA1Q96BD8 255 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 ERP27Q96DN0 273 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 GPR101Q96P66 508 aaPredicted RBP5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 ELAC2Q9BQ52 826 aaKnown RBP5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 RUSC1Q9BVN2 902 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 IGFLR1Q9H665 355 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 PANK3Q9H999 370 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 PPP4R2Q9NY27 417 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 PPM1HQ9ULR3 514 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 KCNMB2Q9Y691 235 aa5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 CEP170BQ9Y4F5 1589 aaPredicted RBP5.83□□□□□ -1.48
SPARCL1-204ENST00000458304 FAM135BQ49AJ0 1406 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 KNDC1Q76NI1 1749 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 ABCC11Q96J66 1382 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 NPC1L1Q9UHC9 1359 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 DNAJC25-GNG10A0A024R161 153 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 BICDL2A1A5D9 508 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 KLRG2A4D1S0 409 aaPredicted RBP5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 SPDYE3A6NKU9 549 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 FAM229AH3BQW9 127 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 LILRB5O75023 590 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 PHACTR2O75167 634 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 SASH3O75995 380 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 ABLIM3O94929 683 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 FAM153BP0C7A2 387 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 LMNB2Q03252 620 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 TBC1D8BQ0IIM8 1120 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 GRM2Q14416 872 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 PUM3Q15397 648 aaKnown RBP5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 RNF219Q5W0B1 726 aaPredicted RBP5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 PSAPL1Q6NUJ1 521 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 MMS22LQ6ZRQ5 1243 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 FAM196AQ6ZSG2 479 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 SV2BQ7L1I2 683 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 DHX32Q7L7V1 743 aaKnown RBP5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 KRT25Q7Z3Z0 450 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 VPS37AQ8NEZ2 397 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 PI4K2BQ8TCG2 481 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 TIFAQ96CG3 184 aa5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 TRMT2BQ96GJ1 504 aaKnown RBP5.82□□□□□ -1.48
SPARCL1-204ENST00000458304 MPP4Q96JB8 637 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms