RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 TSKSQ9UJT2 592 aa13.68□□□□□ -0.22
TRAPPC12-212ENST00000457845 ISY1Q9ULR0 285 aaKnown RBP13.68□□□□□ -0.22
TRAPPC12-212ENST00000457845 ZNF236Q9UL36 1845 aa13.68□□□□□ -0.22
TRAPPC12-212ENST00000457845 ST18O60284 1047 aa13.67□□□□□ -0.22
TRAPPC12-212ENST00000457845 FKTNO75072 461 aa13.67□□□□□ -0.22
TRAPPC12-212ENST00000457845 ADD1P35611 737 aaKnown RBP13.67□□□□□ -0.22
TRAPPC12-212ENST00000457845 STAT3P40763 770 aa13.67□□□□□ -0.22
TRAPPC12-212ENST00000457845 CTCFP49711 727 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC12-212ENST00000457845 LACTBP83111 547 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC12-212ENST00000457845 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.67□□□□□ -0.22
TRAPPC12-212ENST00000457845 ZNF296Q8WUU4 475 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC12-212ENST00000457845 MOV10L1Q9BXT6 1211 aaKnown RBP13.67□□□□□ -0.22
TRAPPC12-212ENST00000457845 TEX13BQ9BXU2 312 aa13.67□□□□□ -0.22
TRAPPC12-212ENST00000457845 PNMA2Q9UL42 364 aa13.67□□□□□ -0.22
TRAPPC12-212ENST00000457845 LIMCH1Q9UPQ0 1083 aa13.67□□□□□ -0.22
TRAPPC12-212ENST00000457845 CNTNAP5Q8WYK1 1306 aa13.66□□□□□ -0.22
TRAPPC12-212ENST00000457845 LCTP09848 1927 aa13.66□□□□□ -0.22
TRAPPC12-212ENST00000457845 ZBTB5O15062 677 aa13.66□□□□□ -0.22
TRAPPC12-212ENST00000457845 LARGE1O95461 756 aa13.66□□□□□ -0.22
TRAPPC12-212ENST00000457845 SLC25A27O95847 323 aa13.66□□□□□ -0.22
TRAPPC12-212ENST00000457845 ICAM1P05362 532 aa13.66□□□□□ -0.22
TRAPPC12-212ENST00000457845 CTGFP29279 349 aa13.66□□□□□ -0.22
TRAPPC12-212ENST00000457845 CCT2P78371 535 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-212ENST00000457845 CCNA1P78396 465 aa13.66□□□□□ -0.22
TRAPPC12-212ENST00000457845 CAP1Q01518 475 aa13.66□□□□□ -0.22
TRAPPC12-212ENST00000457845 SCRN1Q12765 414 aa13.66□□□□□ -0.22
TRAPPC12-212ENST00000457845 CDC37Q16543 378 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC12-212ENST00000457845 QRICH1Q2TAL8 776 aa13.66□□□□□ -0.22
TRAPPC12-212ENST00000457845 SAMD1Q6SPF0 538 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC12-212ENST00000457845 CMTR1Q8N1G2 835 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-212ENST00000457845 PORCNQ9H237 461 aa13.66□□□□□ -0.22
TRAPPC12-212ENST00000457845 RAVER2Q9HCJ3 691 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-212ENST00000457845 NAP1L2Q9ULW6 460 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC12-212ENST00000457845 RIPK3Q9Y572 518 aa13.66□□□□□ -0.22
TRAPPC12-212ENST00000457845 PNMA6FA0A0J9YX94 578 aa13.65□□□□□ -0.22
TRAPPC12-212ENST00000457845 CD2BP2O95400 341 aaKnown RBP13.65□□□□□ -0.22
TRAPPC12-212ENST00000457845 IFNAR1P17181 557 aa13.65□□□□□ -0.22
TRAPPC12-212ENST00000457845 COPB2P35606 906 aa13.65□□□□□ -0.22
TRAPPC12-212ENST00000457845 MCM2P49736 904 aa13.65□□□□□ -0.22
TRAPPC12-212ENST00000457845 SNAP25P60880 206 aa13.65□□□□□ -0.22
TRAPPC12-212ENST00000457845 TKFCQ3LXA3 575 aa13.65□□□□□ -0.22
TRAPPC12-212ENST00000457845 CPXCR1Q8N123 301 aa13.65□□□□□ -0.22
TRAPPC12-212ENST00000457845 ERO1AQ96HE7 468 aa13.65□□□□□ -0.22
TRAPPC12-212ENST00000457845 ZSCAN31Q96LW9 406 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC12-212ENST00000457845 AGBL1Q96MI9 1066 aa13.65□□□□□ -0.22
TRAPPC12-212ENST00000457845 PIGSQ96S52 555 aa13.65□□□□□ -0.22
TRAPPC12-212ENST00000457845 SLKQ9H2G2 1235 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC12-212ENST00000457845 MROH8Q9H579 483 aa13.65□□□□□ -0.22
TRAPPC12-212ENST00000457845 NCOA5Q9HCD5 579 aaKnown RBP13.65□□□□□ -0.22
TRAPPC12-212ENST00000457845 VAT1LQ9HCJ6 419 aa13.65□□□□□ -0.22
TRAPPC12-212ENST00000457845 DHX16O60231 1041 aaKnown RBP13.64□□□□□ -0.23
TRAPPC12-212ENST00000457845 PPP1R11O60927 126 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC12-212ENST00000457845 ERCC3P19447 782 aa13.64□□□□□ -0.23
TRAPPC12-212ENST00000457845 MAPK4P31152 587 aa13.64□□□□□ -0.23
TRAPPC12-212ENST00000457845 ST3GAL1Q11201 340 aa13.64□□□□□ -0.23
TRAPPC12-212ENST00000457845 STK3Q13188 491 aa13.64□□□□□ -0.23
TRAPPC12-212ENST00000457845 PLS1Q14651 629 aa13.64□□□□□ -0.23
TRAPPC12-212ENST00000457845 SNRNP48Q6IEG0 339 aaKnown RBP13.64□□□□□ -0.23
TRAPPC12-212ENST00000457845 CCDC174Q6PII3 467 aa13.64□□□□□ -0.23
TRAPPC12-212ENST00000457845 CHST13Q8NET6 341 aa13.64□□□□□ -0.23
TRAPPC12-212ENST00000457845 GTF3C6Q969F1 213 aa13.64□□□□□ -0.23
TRAPPC12-212ENST00000457845 RRP36Q96EU6 259 aaKnown RBP13.64□□□□□ -0.23
TRAPPC12-212ENST00000457845 EFCC1Q9HA90 598 aa13.64□□□□□ -0.23
TRAPPC12-212ENST00000457845 SH2B1Q9NRF2 756 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC12-212ENST00000457845 CTDP1Q9Y5B0 961 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC12-212ENST00000457845 PRPF3O43395 683 aaKnown RBP13.63□□□□□ -0.23
TRAPPC12-212ENST00000457845 GNRH1P01148 92 aa13.63□□□□□ -0.23
TRAPPC12-212ENST00000457845 PSMC4P43686 418 aa13.63□□□□□ -0.23
TRAPPC12-212ENST00000457845 LBX1P52954 281 aa13.63□□□□□ -0.23
TRAPPC12-212ENST00000457845 NOL8Q76FK4 1167 aaKnown RBP13.63□□□□□ -0.23
TRAPPC12-212ENST00000457845 GPR142Q7Z601 462 aa13.63□□□□□ -0.23
TRAPPC12-212ENST00000457845 FBXO11Q86XK2 927 aa13.63□□□□□ -0.23
TRAPPC12-212ENST00000457845 CCDC82Q8N4S0 544 aa13.63□□□□□ -0.23
TRAPPC12-212ENST00000457845 CD99L2Q8TCZ2 262 aa13.63□□□□□ -0.23
TRAPPC12-212ENST00000457845 TRIM47Q96LD4 638 aa13.63□□□□□ -0.23
TRAPPC12-212ENST00000457845 AMNQ9BXJ7 453 aa13.63□□□□□ -0.23
TRAPPC12-212ENST00000457845 RNF26Q9BY78 433 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC12-212ENST00000457845 ARHGAP39Q9C0H5 1083 aa13.63□□□□□ -0.23
TRAPPC12-212ENST00000457845 MAF1Q9H063 256 aa13.63□□□□□ -0.23
TRAPPC12-212ENST00000457845 CCPG1Q9ULG6 757 aa13.63□□□□□ -0.23
TRAPPC12-212ENST00000457845 MCM3APO60318 1980 aa13.62□□□□□ -0.23
TRAPPC12-212ENST00000457845 STRNO43815 780 aa13.62□□□□□ -0.23
TRAPPC12-212ENST00000457845 CTDNEP1O95476 244 aa13.62□□□□□ -0.23
TRAPPC12-212ENST00000457845 FCGRTP55899 365 aa13.62□□□□□ -0.23
TRAPPC12-212ENST00000457845 TRAF1Q13077 416 aa13.62□□□□□ -0.23
TRAPPC12-212ENST00000457845 KIF22Q14807 665 aa13.62□□□□□ -0.23
TRAPPC12-212ENST00000457845 PLEKHH3Q7Z736 793 aa13.62□□□□□ -0.23
TRAPPC12-212ENST00000457845 NCAPG2Q86XI2 1143 aa13.62□□□□□ -0.23
TRAPPC12-212ENST00000457845 HOMER1Q86YM7 354 aa13.62□□□□□ -0.23
TRAPPC12-212ENST00000457845 ABRAQ8N0Z2 381 aa13.62□□□□□ -0.23
TRAPPC12-212ENST00000457845 NECAB1Q8N987 351 aa13.62□□□□□ -0.23
TRAPPC12-212ENST00000457845 CLEC4DQ8WXI8 215 aa13.62□□□□□ -0.23
TRAPPC12-212ENST00000457845 SNX21Q969T3 373 aa13.62□□□□□ -0.23
TRAPPC12-212ENST00000457845 TRERF1Q96PN7 1200 aa13.62□□□□□ -0.23
TRAPPC12-212ENST00000457845 PRDM10Q9NQV6 1147 aa13.62□□□□□ -0.23
TRAPPC12-212ENST00000457845 RBM27Q9P2N5 1060 aaKnown RBP13.62□□□□□ -0.23
TRAPPC12-212ENST00000457845 FBXO40Q9UH90 709 aa13.62□□□□□ -0.23
TRAPPC12-212ENST00000457845 GJD2Q9UKL4 321 aa13.62□□□□□ -0.23
TRAPPC12-212ENST00000457845 V9GY48 417 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC12-212ENST00000457845 ABCB11O95342 1321 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms