RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 UBA5Q9GZZ9 404 aa18.85■□□□□ 0.61
CCDC43-202ENST00000457422 USP40Q9NVE5 1235 aa18.85■□□□□ 0.61
CCDC43-202ENST00000457422 RWDD2AQ9UIY3 292 aa18.85■□□□□ 0.61
CCDC43-202ENST00000457422 CTNND2Q9UQB3 1225 aa18.85■□□□□ 0.61
CCDC43-202ENST00000457422 FRMPD2Q68DX3 1309 aaPredicted RBP18.85■□□□□ 0.61
CCDC43-202ENST00000457422 PP2D1A8MPX8 630 aa18.85■□□□□ 0.61
CCDC43-202ENST00000457422 PBX1P40424 430 aa18.85■□□□□ 0.61
CCDC43-202ENST00000457422 SOGA3Q5TF21 947 aa18.85■□□□□ 0.61
CCDC43-202ENST00000457422 CLEC10AQ8IUN9 316 aa18.85■□□□□ 0.61
CCDC43-202ENST00000457422 LRRC47Q8N1G4 583 aaKnown RBP18.85■□□□□ 0.61
CCDC43-202ENST00000457422 MASTLQ96GX5 879 aa18.85■□□□□ 0.61
CCDC43-202ENST00000457422 ADD3Q9UEY8 706 aaKnown RBP18.85■□□□□ 0.61
CCDC43-202ENST00000457422 STX10O60499 249 aa18.84■□□□□ 0.61
CCDC43-202ENST00000457422 MAGEF1Q9HAY2 307 aa18.84■□□□□ 0.61
CCDC43-202ENST00000457422 SERPINB13Q9UIV8 391 aa18.84■□□□□ 0.61
CCDC43-202ENST00000457422 APBA3O96018 575 aa18.83■□□□□ 0.61
CCDC43-202ENST00000457422 OR52Z1P0C646 297 aa18.83■□□□□ 0.61
CCDC43-202ENST00000457422 UBA7P41226 1012 aa18.83■□□□□ 0.61
CCDC43-202ENST00000457422 EIF6P56537 245 aaKnown RBP18.83■□□□□ 0.61
CCDC43-202ENST00000457422 KCNB1Q14721 858 aa18.83■□□□□ 0.61
CCDC43-202ENST00000457422 RRAGBQ5VZM2 374 aa18.83■□□□□ 0.61
CCDC43-202ENST00000457422 NEK8Q86SG6 692 aa18.83■□□□□ 0.61
CCDC43-202ENST00000457422 BAG1Q99933 345 aaPredicted RBP18.83■□□□□ 0.61
CCDC43-202ENST00000457422 CUEDC2Q9H467 287 aa18.83■□□□□ 0.61
CCDC43-202ENST00000457422 PARP3Q9Y6F1 533 aa18.83■□□□□ 0.61
CCDC43-202ENST00000457422 PAK1Q13153 545 aa18.83■□□□□ 0.6
CCDC43-202ENST00000457422 CDC42EP5Q6NZY7 148 aa18.83■□□□□ 0.6
CCDC43-202ENST00000457422 KBTBD4Q9NVX7 518 aa18.83■□□□□ 0.6
CCDC43-202ENST00000457422 LRRC10BA6NIK2 292 aa18.82■□□□□ 0.6
CCDC43-202ENST00000457422 G3V3G9 751 aa18.82■□□□□ 0.6
CCDC43-202ENST00000457422 TTLL1O95922 423 aa18.82■□□□□ 0.6
CCDC43-202ENST00000457422 SPAG1Q07617 926 aa18.82■□□□□ 0.6
CCDC43-202ENST00000457422 NCBP1Q09161 790 aaKnown RBP18.82■□□□□ 0.6
CCDC43-202ENST00000457422 DCAF8Q5TAQ9 597 aa18.82■□□□□ 0.6
CCDC43-202ENST00000457422 MSL1Q68DK7 614 aa18.82■□□□□ 0.6
CCDC43-202ENST00000457422 REXO1Q8N1G1 1221 aaKnown RBP18.82■□□□□ 0.6
CCDC43-202ENST00000457422 RASSF8Q8NHQ8 419 aa18.82■□□□□ 0.6
CCDC43-202ENST00000457422 TEKT1Q969V4 418 aa18.82■□□□□ 0.6
CCDC43-202ENST00000457422 TMX4Q9H1E5 349 aaPredicted RBP18.82■□□□□ 0.6
CCDC43-202ENST00000457422 ZNF646O15015 1829 aaPredicted RBP18.82■□□□□ 0.6
CCDC43-202ENST00000457422 MYH4Q9Y623 1939 aa18.82■□□□□ 0.6
CCDC43-202ENST00000457422 ZSCAN12O43309 604 aa18.81■□□□□ 0.6
CCDC43-202ENST00000457422 CCNT1O60563 726 aaKnown RBP18.81■□□□□ 0.6
CCDC43-202ENST00000457422 COBLO75128 1261 aa18.81■□□□□ 0.6
CCDC43-202ENST00000457422 SHMT1P34896 483 aa18.81■□□□□ 0.6
CCDC43-202ENST00000457422 LETM2Q2VYF4 491 aa18.81■□□□□ 0.6
CCDC43-202ENST00000457422 FILIP1LQ4L180 1135 aa18.81■□□□□ 0.6
CCDC43-202ENST00000457422 APOBEC3HQ6NTF7 200 aaKnown RBP18.81■□□□□ 0.6
CCDC43-202ENST00000457422 REXO1L1PQ8IX06 675 aa18.81■□□□□ 0.6
CCDC43-202ENST00000457422 L2HGDHQ9H9P8 463 aa18.81■□□□□ 0.6
CCDC43-202ENST00000457422 LIMA1Q9UHB6 759 aaKnown RBP18.81■□□□□ 0.6
CCDC43-202ENST00000457422 TEX33O43247 280 aa18.81■□□□□ 0.6
CCDC43-202ENST00000457422 PODNQ7Z5L7 613 aa18.81■□□□□ 0.6
CCDC43-202ENST00000457422 PANX2Q96RD6 677 aa18.81■□□□□ 0.6
CCDC43-202ENST00000457422 MRIQ9BWK5 157 aa18.81■□□□□ 0.6
CCDC43-202ENST00000457422 EHD4Q9H223 541 aa18.81■□□□□ 0.6
CCDC43-202ENST00000457422 ITIH6Q6UXX5 1313 aa18.81■□□□□ 0.6
CCDC43-202ENST00000457422 SIPA1L1O43166 1804 aa18.8■□□□□ 0.6
CCDC43-202ENST00000457422 HLA-DOAP06340 250 aa18.8■□□□□ 0.6
CCDC43-202ENST00000457422 ADKP55263 362 aaKnown RBP18.8■□□□□ 0.6
CCDC43-202ENST00000457422 ETF1P62495 437 aaKnown RBP18.8■□□□□ 0.6
CCDC43-202ENST00000457422 PPP1R18Q6NYC8 613 aa18.8■□□□□ 0.6
CCDC43-202ENST00000457422 PHLPP2Q6ZVD8 1323 aa18.8■□□□□ 0.6
CCDC43-202ENST00000457422 TBCKQ8TEA7 893 aa18.8■□□□□ 0.6
CCDC43-202ENST00000457422 NELFBQ8WX92 580 aa18.8■□□□□ 0.6
CCDC43-202ENST00000457422 ZNF622Q969S3 477 aaKnown RBP eCLIP18.8■□□□□ 0.6
CCDC43-202ENST00000457422 DBNDD1Q9H9R9 158 aa18.8■□□□□ 0.6
CCDC43-202ENST00000457422 TMEM260Q9NX78 707 aa18.8■□□□□ 0.6
CCDC43-202ENST00000457422 GOLGA6L9A6NEM1 432 aa18.8■□□□□ 0.6
CCDC43-202ENST00000457422 AKR1B15C9JRZ8 316 aaPredicted RBP18.8■□□□□ 0.6
CCDC43-202ENST00000457422 KLRC4O43908 158 aa18.8■□□□□ 0.6
CCDC43-202ENST00000457422 FKBP1AP62942 108 aaKnown RBP18.8■□□□□ 0.6
CCDC43-202ENST00000457422 ZNF543Q08ER8 600 aa18.8■□□□□ 0.6
CCDC43-202ENST00000457422 NFIAQ12857 509 aa18.8■□□□□ 0.6
CCDC43-202ENST00000457422 PPP4R3BQ5MIZ7 849 aa18.8■□□□□ 0.6
CCDC43-202ENST00000457422 JAKMIP3Q5VZ66 844 aa18.8■□□□□ 0.6
CCDC43-202ENST00000457422 PLIN2Q99541 437 aa18.8■□□□□ 0.6
CCDC43-202ENST00000457422 GPCPD1Q9NPB8 672 aa18.8■□□□□ 0.6
CCDC43-202ENST00000457422 BIN2Q9UBW5 565 aaPredicted RBP18.8■□□□□ 0.6
CCDC43-202ENST00000457422 GDAQ9Y2T3 454 aa18.8■□□□□ 0.6
CCDC43-202ENST00000457422 RHOBTB3O94955 611 aa18.79■□□□□ 0.6
CCDC43-202ENST00000457422 PRCPP42785 496 aa18.79■□□□□ 0.6
CCDC43-202ENST00000457422 CRKP46108 304 aa18.79■□□□□ 0.6
CCDC43-202ENST00000457422 TRIM65Q6PJ69 517 aa18.79■□□□□ 0.6
CCDC43-202ENST00000457422 SYT10Q6XYQ8 523 aa18.79■□□□□ 0.6
CCDC43-202ENST00000457422 CABP7Q86V35 215 aa18.79■□□□□ 0.6
CCDC43-202ENST00000457422 ADSSL1Q8N142 457 aa18.79■□□□□ 0.6
CCDC43-202ENST00000457422 LRRC15Q8TF66 581 aa18.79■□□□□ 0.6
CCDC43-202ENST00000457422 ZDHHC15Q96MV8 337 aa18.79■□□□□ 0.6
CCDC43-202ENST00000457422 KCNQ5Q9NR82 932 aa18.79■□□□□ 0.6
CCDC43-202ENST00000457422 PPP2R2CQ9Y2T4 447 aa18.79■□□□□ 0.6
CCDC43-202ENST00000457422 KRT31Q15323 416 aa18.78■□□□□ 0.6
CCDC43-202ENST00000457422 IGSF22Q8N9C0 903 aa18.78■□□□□ 0.6
CCDC43-202ENST00000457422 COA7Q96BR5 231 aa18.78■□□□□ 0.6
CCDC43-202ENST00000457422 ERO1AQ96HE7 468 aa18.78■□□□□ 0.6
CCDC43-202ENST00000457422 NAA15Q9BXJ9 866 aaKnown RBP18.78■□□□□ 0.6
CCDC43-202ENST00000457422 ADCY7P51828 1080 aa18.78■□□□□ 0.6
CCDC43-202ENST00000457422 KMT5BQ4FZB7 885 aa18.78■□□□□ 0.6
CCDC43-202ENST00000457422 GPATCH4Q5T3I0 446 aaKnown RBP18.78■□□□□ 0.6
CCDC43-202ENST00000457422 C2CD5Q86YS7 1000 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms