RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 CTCFP49711 727 aaPredicted RBP20.74■□□□□ 0.91
FAM239A-203ENST00000456563 MCM2P49736 904 aa20.74■□□□□ 0.91
FAM239A-203ENST00000456563 FUT2Q10981 343 aa20.74■□□□□ 0.91
FAM239A-203ENST00000456563 STK3Q13188 491 aa20.74■□□□□ 0.91
FAM239A-203ENST00000456563 CDC37Q16543 378 aaPredicted RBP20.74■□□□□ 0.91
FAM239A-203ENST00000456563 RIOX2Q8IUF8 465 aa20.74■□□□□ 0.91
FAM239A-203ENST00000456563 CPXCR1Q8N123 301 aa20.74■□□□□ 0.91
FAM239A-203ENST00000456563 CMTR1Q8N1G2 835 aaKnown RBP20.74■□□□□ 0.91
FAM239A-203ENST00000456563 ZSCAN31Q96LW9 406 aaPredicted RBP20.74■□□□□ 0.91
FAM239A-203ENST00000456563 MOV10L1Q9BXT6 1211 aaKnown RBP20.74■□□□□ 0.91
FAM239A-203ENST00000456563 TEX13BQ9BXU2 312 aa20.74■□□□□ 0.91
FAM239A-203ENST00000456563 RAVER2Q9HCJ3 691 aaKnown RBP20.74■□□□□ 0.91
FAM239A-203ENST00000456563 PNMA2Q9UL42 364 aa20.74■□□□□ 0.91
FAM239A-203ENST00000456563 LARGE1O95461 756 aa20.73■□□□□ 0.91
FAM239A-203ENST00000456563 SLC25A27O95847 323 aa20.73■□□□□ 0.91
FAM239A-203ENST00000456563 ICAM1P05362 532 aa20.73■□□□□ 0.91
FAM239A-203ENST00000456563 LACTBP83111 547 aaPredicted RBP20.73■□□□□ 0.91
FAM239A-203ENST00000456563 SCRN1Q12765 414 aa20.73■□□□□ 0.91
FAM239A-203ENST00000456563 PLS1Q14651 629 aa20.73■□□□□ 0.91
FAM239A-203ENST00000456563 NTRK3Q16288 839 aa20.73■□□□□ 0.91
FAM239A-203ENST00000456563 QRICH1Q2TAL8 776 aa20.73■□□□□ 0.91
FAM239A-203ENST00000456563 CCDC174Q6PII3 467 aa20.73■□□□□ 0.91
FAM239A-203ENST00000456563 SHCBP1Q8NEM2 672 aa20.73■□□□□ 0.91
FAM239A-203ENST00000456563 ZNF296Q8WUU4 475 aaPredicted RBP20.73■□□□□ 0.91
FAM239A-203ENST00000456563 NCOA5Q9HCD5 579 aaKnown RBP20.73■□□□□ 0.91
FAM239A-203ENST00000456563 CNTNAP5Q8WYK1 1306 aa20.73■□□□□ 0.91
FAM239A-203ENST00000456563 ZBTB5O15062 677 aa20.72■□□□□ 0.91
FAM239A-203ENST00000456563 CD2BP2O95400 341 aaKnown RBP20.72■□□□□ 0.91
FAM239A-203ENST00000456563 COPB2P35606 906 aa20.72■□□□□ 0.91
FAM239A-203ENST00000456563 SNRNP48Q6IEG0 339 aaKnown RBP20.72■□□□□ 0.91
FAM239A-203ENST00000456563 CCDC82Q8N4S0 544 aa20.72■□□□□ 0.91
FAM239A-203ENST00000456563 RRP36Q96EU6 259 aaKnown RBP20.72■□□□□ 0.91
FAM239A-203ENST00000456563 PIGSQ96S52 555 aa20.72■□□□□ 0.91
FAM239A-203ENST00000456563 SH2B1Q9NRF2 756 aaPredicted RBP20.72■□□□□ 0.91
FAM239A-203ENST00000456563 PNMA6FA0A0J9YX94 578 aa20.71■□□□□ 0.91
FAM239A-203ENST00000456563 IFNAR1P17181 557 aa20.71■□□□□ 0.91
FAM239A-203ENST00000456563 MAPK4P31152 587 aa20.71■□□□□ 0.91
FAM239A-203ENST00000456563 TKFCQ3LXA3 575 aa20.71■□□□□ 0.91
FAM239A-203ENST00000456563 GTF3C6Q969F1 213 aa20.71■□□□□ 0.91
FAM239A-203ENST00000456563 ERO1AQ96HE7 468 aa20.71■□□□□ 0.91
FAM239A-203ENST00000456563 AGBL1Q96MI9 1066 aa20.71■□□□□ 0.91
FAM239A-203ENST00000456563 PORCNQ9H237 461 aa20.71■□□□□ 0.91
FAM239A-203ENST00000456563 CCPG1Q9ULG6 757 aa20.71■□□□□ 0.91
FAM239A-203ENST00000456563 COL11A1P12107 1806 aaPredicted RBP20.71■□□□□ 0.91
FAM239A-203ENST00000456563 CPLX1O14810 134 aa20.7■□□□□ 0.9
FAM239A-203ENST00000456563 ERCC3P19447 782 aa20.7■□□□□ 0.9
FAM239A-203ENST00000456563 KIF22Q14807 665 aa20.7■□□□□ 0.9
FAM239A-203ENST00000456563 CPLX2Q6PUV4 134 aaKnown RBP20.7■□□□□ 0.9
FAM239A-203ENST00000456563 FBXO11Q86XK2 927 aa20.7■□□□□ 0.9
FAM239A-203ENST00000456563 HOMER1Q86YM7 354 aa20.7■□□□□ 0.9
FAM239A-203ENST00000456563 NECAB1Q8N987 351 aa20.7■□□□□ 0.9
FAM239A-203ENST00000456563 AMNQ9BXJ7 453 aa20.7■□□□□ 0.9
FAM239A-203ENST00000456563 MROH8Q9H579 483 aa20.7■□□□□ 0.9
FAM239A-203ENST00000456563 EFCC1Q9HA90 598 aa20.7■□□□□ 0.9
FAM239A-203ENST00000456563 RIPK3Q9Y572 518 aa20.7■□□□□ 0.9
FAM239A-203ENST00000456563 CTGFP29279 349 aa20.69■□□□□ 0.9
FAM239A-203ENST00000456563 FCGRTP55899 365 aa20.69■□□□□ 0.9
FAM239A-203ENST00000456563 TRAF1Q13077 416 aa20.69■□□□□ 0.9
FAM239A-203ENST00000456563 NCAPG2Q86XI2 1143 aa20.69■□□□□ 0.9
FAM239A-203ENST00000456563 CCAR1Q8IX12 1150 aaKnown RBP20.69■□□□□ 0.9
FAM239A-203ENST00000456563 CHST13Q8NET6 341 aa20.69■□□□□ 0.9
FAM239A-203ENST00000456563 CD99L2Q8TCZ2 262 aa20.69■□□□□ 0.9
FAM239A-203ENST00000456563 RNF26Q9BY78 433 aaPredicted RBP20.69■□□□□ 0.9
FAM239A-203ENST00000456563 RBM27Q9P2N5 1060 aaKnown RBP20.69■□□□□ 0.9
FAM239A-203ENST00000456563 SEC63Q9UGP8 760 aaKnown RBP20.69■□□□□ 0.9
FAM239A-203ENST00000456563 V9GY48 417 aaPredicted RBP20.69■□□□□ 0.9
FAM239A-203ENST00000456563 PCNTO95613 3336 aa20.69■□□□□ 0.9
FAM239A-203ENST00000456563 PRPF3O43395 683 aaKnown RBP20.68■□□□□ 0.9
FAM239A-203ENST00000456563 PPP1R11O60927 126 aaPredicted RBP20.68■□□□□ 0.9
FAM239A-203ENST00000456563 ALAS1P13196 640 aa20.68■□□□□ 0.9
FAM239A-203ENST00000456563 PSMC4P43686 418 aa20.68■□□□□ 0.9
FAM239A-203ENST00000456563 LBX1P52954 281 aa20.68■□□□□ 0.9
FAM239A-203ENST00000456563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.68■□□□□ 0.9
FAM239A-203ENST00000456563 PIBF1Q8WXW3 757 aa20.68■□□□□ 0.9
FAM239A-203ENST00000456563 FBXO40Q9UH90 709 aa20.68■□□□□ 0.9
FAM239A-203ENST00000456563 CDKL5O76039 1030 aa20.67■□□□□ 0.9
FAM239A-203ENST00000456563 SLC4A3P48751 1232 aa20.67■□□□□ 0.9
FAM239A-203ENST00000456563 CAP1Q01518 475 aa20.67■□□□□ 0.9
FAM239A-203ENST00000456563 ST3GAL1Q11201 340 aa20.67■□□□□ 0.9
FAM239A-203ENST00000456563 ARHGEF6Q15052 776 aa20.67■□□□□ 0.9
FAM239A-203ENST00000456563 GPR142Q7Z601 462 aa20.67■□□□□ 0.9
FAM239A-203ENST00000456563 PLEKHH3Q7Z736 793 aa20.67■□□□□ 0.9
FAM239A-203ENST00000456563 PHKBQ93100 1093 aa20.67■□□□□ 0.9
FAM239A-203ENST00000456563 SNX21Q969T3 373 aa20.67■□□□□ 0.9
FAM239A-203ENST00000456563 TMX3Q96JJ7 454 aa20.67■□□□□ 0.9
FAM239A-203ENST00000456563 TRIM47Q96LD4 638 aa20.67■□□□□ 0.9
FAM239A-203ENST00000456563 TRERF1Q96PN7 1200 aa20.67■□□□□ 0.9
FAM239A-203ENST00000456563 ARHGAP39Q9C0H5 1083 aa20.67■□□□□ 0.9
FAM239A-203ENST00000456563 RNF146Q9NTX7 359 aa20.67■□□□□ 0.9
FAM239A-203ENST00000456563 ABCB11O95342 1321 aa20.67■□□□□ 0.9
FAM239A-203ENST00000456563 hCG_1642624A0A1W2PR95 340 aa20.66■□□□□ 0.9
FAM239A-203ENST00000456563 TNPO2O14787 897 aaKnown RBP20.66■□□□□ 0.9
FAM239A-203ENST00000456563 STRNO43815 780 aa20.66■□□□□ 0.9
FAM239A-203ENST00000456563 FMNL1O95466 1100 aaPredicted RBP20.66■□□□□ 0.9
FAM239A-203ENST00000456563 CTDNEP1O95476 244 aa20.66■□□□□ 0.9
FAM239A-203ENST00000456563 GNRH1P01148 92 aa20.66■□□□□ 0.9
FAM239A-203ENST00000456563 AKAP17AQ02040 695 aaKnown RBP20.66■□□□□ 0.9
FAM239A-203ENST00000456563 SSRP1Q08945 709 aaKnown RBP20.66■□□□□ 0.9
FAM239A-203ENST00000456563 USH1GQ495M9 461 aa20.66■□□□□ 0.9
FAM239A-203ENST00000456563 ABRAQ8N0Z2 381 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms