RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 GMCL1P1Q8NEA9 526 aa14.23□□□□□ -0.13
LMCD1-206ENST00000456506 NUP133Q8WUM0 1156 aa14.23□□□□□ -0.13
LMCD1-206ENST00000456506 DDX11Q96FC9 970 aa14.23□□□□□ -0.13
LMCD1-206ENST00000456506 RAVER2Q9HCJ3 691 aaKnown RBP14.23□□□□□ -0.13
LMCD1-206ENST00000456506 MTMR4Q9NYA4 1195 aa14.23□□□□□ -0.13
LMCD1-206ENST00000456506 CLIP2Q9UDT6 1046 aa14.23□□□□□ -0.13
LMCD1-206ENST00000456506 SCN10AQ9Y5Y9 1956 aa14.22□□□□□ -0.13
LMCD1-206ENST00000456506 MYH6P13533 1939 aa14.22□□□□□ -0.13
LMCD1-206ENST00000456506 KIAA1217Q5T5P2 1943 aa14.22□□□□□ -0.13
LMCD1-206ENST00000456506 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.22□□□□□ -0.13
LMCD1-206ENST00000456506 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.22□□□□□ -0.13
LMCD1-206ENST00000456506 DCDC2CA8MYV0 355 aa14.22□□□□□ -0.13
LMCD1-206ENST00000456506 PRDM1O75626 825 aa14.22□□□□□ -0.13
LMCD1-206ENST00000456506 CD4P01730 458 aa14.22□□□□□ -0.13
LMCD1-206ENST00000456506 OAZ1P54368 228 aa14.22□□□□□ -0.13
LMCD1-206ENST00000456506 TMEM240Q5SV17 173 aa14.22□□□□□ -0.13
LMCD1-206ENST00000456506 TSHZ3Q63HK5 1081 aa14.22□□□□□ -0.13
LMCD1-206ENST00000456506 FAM133AQ8N9E0 248 aa14.22□□□□□ -0.13
LMCD1-206ENST00000456506 ABHD16BQ9H3Z7 469 aa14.22□□□□□ -0.13
LMCD1-206ENST00000456506 MKNK2Q9HBH9 465 aa14.22□□□□□ -0.13
LMCD1-206ENST00000456506 ZHX1Q9UKY1 873 aaPredicted RBP14.22□□□□□ -0.13
LMCD1-206ENST00000456506 LAMA4Q16363 1823 aa14.22□□□□□ -0.13
LMCD1-206ENST00000456506 TTC28Q96AY4 2481 aa14.21□□□□□ -0.13
LMCD1-206ENST00000456506 MROH7Q68CQ1 1323 aa14.21□□□□□ -0.13
LMCD1-206ENST00000456506 SOWAHBA6NEL2 793 aa14.21□□□□□ -0.13
LMCD1-206ENST00000456506 FOXP2O15409 715 aa14.21□□□□□ -0.13
LMCD1-206ENST00000456506 RNF113AO15541 343 aaKnown RBP14.21□□□□□ -0.13
LMCD1-206ENST00000456506 C6orf222P0C671 652 aaPredicted RBP14.21□□□□□ -0.13
LMCD1-206ENST00000456506 PBX2P40425 430 aa14.21□□□□□ -0.13
LMCD1-206ENST00000456506 ARMCX2Q7L311 632 aa14.21□□□□□ -0.13
LMCD1-206ENST00000456506 CCDC144CPQ8IYA2 1237 aa14.21□□□□□ -0.13
LMCD1-206ENST00000456506 LRRC47Q8N1G4 583 aaKnown RBP14.21□□□□□ -0.13
LMCD1-206ENST00000456506 SLC43A3Q8NBI5 491 aa14.21□□□□□ -0.13
LMCD1-206ENST00000456506 CHST13Q8NET6 341 aa14.21□□□□□ -0.13
LMCD1-206ENST00000456506 KIFC2Q96AC6 838 aa14.21□□□□□ -0.13
LMCD1-206ENST00000456506 GLT1D1Q96MS3 346 aa14.21□□□□□ -0.13
LMCD1-206ENST00000456506 ZNF576Q9H609 170 aa14.21□□□□□ -0.13
LMCD1-206ENST00000456506 FEM1BQ9UK73 627 aa14.21□□□□□ -0.13
LMCD1-206ENST00000456506 GRIN2DO15399 1336 aa14.2□□□□□ -0.14
LMCD1-206ENST00000456506 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.2□□□□□ -0.14
LMCD1-206ENST00000456506 ARVCFO00192 962 aa14.2□□□□□ -0.14
LMCD1-206ENST00000456506 ZBED4O75132 1171 aa14.2□□□□□ -0.14
LMCD1-206ENST00000456506 CSF2RAP15509 400 aa14.2□□□□□ -0.14
LMCD1-206ENST00000456506 PTGS1P23219 599 aa14.2□□□□□ -0.14
LMCD1-206ENST00000456506 CNTN2Q02246 1040 aa14.2□□□□□ -0.14
LMCD1-206ENST00000456506 IFNL3Q8IZI9 196 aa14.2□□□□□ -0.14
LMCD1-206ENST00000456506 PCSK9Q8NBP7 692 aaKnown RBP14.2□□□□□ -0.14
LMCD1-206ENST00000456506 NEDD1Q8NHV4 660 aa14.2□□□□□ -0.14
LMCD1-206ENST00000456506 VWCEQ96DN2 955 aa14.2□□□□□ -0.14
LMCD1-206ENST00000456506 SEC62Q99442 399 aaKnown RBP14.2□□□□□ -0.14
LMCD1-206ENST00000456506 PBX4Q9BYU1 374 aa14.2□□□□□ -0.14
LMCD1-206ENST00000456506 DCTPP1Q9H773 170 aa14.2□□□□□ -0.14
LMCD1-206ENST00000456506 A1CFQ9NQ94 594 aaKnown RBP14.2□□□□□ -0.14
LMCD1-206ENST00000456506 FBXO40Q9UH90 709 aa14.2□□□□□ -0.14
LMCD1-206ENST00000456506 GNEQ9Y223 722 aaKnown RBP14.2□□□□□ -0.14
LMCD1-206ENST00000456506 TRIP12Q14669 1992 aaPredicted RBP14.2□□□□□ -0.14
LMCD1-206ENST00000456506 TCF20Q9UGU0 1960 aaKnown RBP14.2□□□□□ -0.14
LMCD1-206ENST00000456506 GRXCR1A8MXD5 290 aa14.19□□□□□ -0.14
LMCD1-206ENST00000456506 PATL2C9JE40 543 aaKnown RBP14.19□□□□□ -0.14
LMCD1-206ENST00000456506 TTLL1O95922 423 aa14.19□□□□□ -0.14
LMCD1-206ENST00000456506 ZFYP08048 801 aaPredicted RBP14.19□□□□□ -0.14
LMCD1-206ENST00000456506 BMP3P12645 472 aa14.19□□□□□ -0.14
LMCD1-206ENST00000456506 DIEXFQ68CQ4 756 aaKnown RBP14.19□□□□□ -0.14
LMCD1-206ENST00000456506 ANKRD35Q8N283 1001 aa14.19□□□□□ -0.14
LMCD1-206ENST00000456506 TIFAQ96CG3 184 aa14.19□□□□□ -0.14
LMCD1-206ENST00000456506 CHMP4BQ9H444 224 aaKnown RBP14.19□□□□□ -0.14
LMCD1-206ENST00000456506 RCAN3Q9UKA8 241 aa14.19□□□□□ -0.14
LMCD1-206ENST00000456506 DDX49Q9Y6V7 483 aaKnown RBP14.19□□□□□ -0.14
LMCD1-206ENST00000456506 COL4A4P53420 1690 aaPredicted RBP14.19□□□□□ -0.14
LMCD1-206ENST00000456506 A0A0U1RQG5 324 aaPredicted RBP14.18□□□□□ -0.14
LMCD1-206ENST00000456506 GNAT2P19087 354 aa14.18□□□□□ -0.14
LMCD1-206ENST00000456506 NOVP48745 357 aa14.18□□□□□ -0.14
LMCD1-206ENST00000456506 SLC4A3P48751 1232 aa14.18□□□□□ -0.14
LMCD1-206ENST00000456506 BEX3Q00994 111 aa14.18□□□□□ -0.14
LMCD1-206ENST00000456506 PPIGQ13427 754 aaKnown RBP eCLIP14.18□□□□□ -0.14
LMCD1-206ENST00000456506 GNASQ5JWF2 1037 aa14.18□□□□□ -0.14
LMCD1-206ENST00000456506 TMEM63BQ5T3F8 832 aa14.18□□□□□ -0.14
LMCD1-206ENST00000456506 SLFN13Q68D06 897 aa14.18□□□□□ -0.14
LMCD1-206ENST00000456506 ZNF365Q70YC5 407 aa14.18□□□□□ -0.14
LMCD1-206ENST00000456506 RASGRP2Q7LDG7 609 aa14.18□□□□□ -0.14
LMCD1-206ENST00000456506 ZNF444Q8N0Y2 327 aaPredicted RBP14.18□□□□□ -0.14
LMCD1-206ENST00000456506 PI4K2BQ8TCG2 481 aa14.18□□□□□ -0.14
LMCD1-206ENST00000456506 GMCL1Q96IK5 515 aa14.18□□□□□ -0.14
LMCD1-206ENST00000456506 AGBL1Q96MI9 1066 aa14.18□□□□□ -0.14
LMCD1-206ENST00000456506 PRDM6Q9NQX0 595 aa14.18□□□□□ -0.14
LMCD1-206ENST00000456506 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.18□□□□□ -0.14
LMCD1-206ENST00000456506 UMODL1Q5DID0 1318 aa14.17□□□□□ -0.14
LMCD1-206ENST00000456506 TET1Q8NFU7 2136 aa14.17□□□□□ -0.14
LMCD1-206ENST00000456506 PLA2G6O60733 806 aa14.17□□□□□ -0.14
LMCD1-206ENST00000456506 FDX1P10109 184 aa14.17□□□□□ -0.14
LMCD1-206ENST00000456506 ACRP10323 421 aa14.17□□□□□ -0.14
LMCD1-206ENST00000456506 CYP2C18P33260 490 aa14.17□□□□□ -0.14
LMCD1-206ENST00000456506 TDO2P48775 406 aa14.17□□□□□ -0.14
LMCD1-206ENST00000456506 ADGRE1Q14246 886 aa14.17□□□□□ -0.14
LMCD1-206ENST00000456506 TAPT1Q6NXT6 567 aa14.17□□□□□ -0.14
LMCD1-206ENST00000456506 ACAD9Q9H845 621 aa14.17□□□□□ -0.14
LMCD1-206ENST00000456506 IL17RBQ9NRM6 502 aa14.17□□□□□ -0.14
LMCD1-206ENST00000456506 CXXC1Q9P0U4 656 aaPredicted RBP14.17□□□□□ -0.14
LMCD1-206ENST00000456506 SALL3Q9BXA9 1300 aa14.16□□□□□ -0.14
LMCD1-206ENST00000456506 MYH7BA7E2Y1 1941 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms