RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 RNF111Q6ZNA4 994 aa6.08□□□□□ -1.44
R3HDM1-212ENST00000456040 TMC3Q7Z5M5 1100 aa6.08□□□□□ -1.44
R3HDM1-212ENST00000456040 BDH2Q9BUT1 245 aa6.08□□□□□ -1.44
R3HDM1-212ENST00000456040 TGIF2Q9GZN2 237 aa6.08□□□□□ -1.44
R3HDM1-212ENST00000456040 PRDM14Q9GZV8 571 aa6.08□□□□□ -1.44
R3HDM1-212ENST00000456040 SUCOQ9UBS9 1254 aaKnown RBP6.08□□□□□ -1.44
R3HDM1-212ENST00000456040 PCDHB12Q9Y5F1 795 aa6.08□□□□□ -1.44
R3HDM1-212ENST00000456040 SSU72P8A0A1W2PR75 194 aa6.07□□□□□ -1.44
R3HDM1-212ENST00000456040 FAM86C2PA6NEL3 165 aa6.07□□□□□ -1.44
R3HDM1-212ENST00000456040 SIGLEC6O43699 453 aa6.07□□□□□ -1.44
R3HDM1-212ENST00000456040 GUCY2CP25092 1073 aa6.07□□□□□ -1.44
R3HDM1-212ENST00000456040 GJA8P48165 433 aa6.07□□□□□ -1.44
R3HDM1-212ENST00000456040 SOX9P48436 509 aa6.07□□□□□ -1.44
R3HDM1-212ENST00000456040 PCBP3P57721 371 aaKnown RBP6.07□□□□□ -1.44
R3HDM1-212ENST00000456040 TEKQ02763 1124 aa6.07□□□□□ -1.44
R3HDM1-212ENST00000456040 EFEMP1Q12805 493 aa6.07□□□□□ -1.44
R3HDM1-212ENST00000456040 VMACQ2NL98 169 aa6.07□□□□□ -1.44
R3HDM1-212ENST00000456040 TCTN2Q96GX1 697 aa6.07□□□□□ -1.44
R3HDM1-212ENST00000456040 KRTAP9-8Q9BYQ0 159 aa6.07□□□□□ -1.44
R3HDM1-212ENST00000456040 FBXL21Q9UKT6 434 aa6.07□□□□□ -1.44
R3HDM1-212ENST00000456040 PRAMEF1O95521 474 aa6.06□□□□□ -1.44
R3HDM1-212ENST00000456040 PMS1P54277 932 aaKnown RBP6.06□□□□□ -1.44
R3HDM1-212ENST00000456040 EIF6P56537 245 aaKnown RBP6.06□□□□□ -1.44
R3HDM1-212ENST00000456040 AUHQ13825 339 aaKnown RBP6.06□□□□□ -1.44
R3HDM1-212ENST00000456040 CCDC81Q6ZN84 652 aa6.06□□□□□ -1.44
R3HDM1-212ENST00000456040 LSRQ86X29 649 aaPredicted RBP6.06□□□□□ -1.44
R3HDM1-212ENST00000456040 CCDC144CPQ8IYA2 1237 aa6.06□□□□□ -1.44
R3HDM1-212ENST00000456040 USHBP1Q8N6Y0 703 aa6.06□□□□□ -1.44
R3HDM1-212ENST00000456040 SMARCC1Q92922 1105 aaPredicted RBP6.06□□□□□ -1.44
R3HDM1-212ENST00000456040 CCSER2Q9H7U1 834 aa6.06□□□□□ -1.44
R3HDM1-212ENST00000456040 CRTAC1Q9NQ79 661 aa6.06□□□□□ -1.44
R3HDM1-212ENST00000456040 PRR13Q9NZ81 148 aa6.06□□□□□ -1.44
R3HDM1-212ENST00000456040 ZMYM5Q9UJ78 669 aa6.06□□□□□ -1.44
R3HDM1-212ENST00000456040 TCFL5Q9UL49 500 aa6.06□□□□□ -1.44
R3HDM1-212ENST00000456040 SUV39H1O43463 412 aa6.05□□□□□ -1.44
R3HDM1-212ENST00000456040 RPL10P27635 214 aaKnown RBP6.05□□□□□ -1.44
R3HDM1-212ENST00000456040 TMEM62Q0P6H9 643 aa6.05□□□□□ -1.44
R3HDM1-212ENST00000456040 BBS9Q3SYG4 887 aa6.05□□□□□ -1.44
R3HDM1-212ENST00000456040 UNC5AQ6ZN44 842 aa6.05□□□□□ -1.44
R3HDM1-212ENST00000456040 RUFY4Q6ZNE9 571 aa6.05□□□□□ -1.44
R3HDM1-212ENST00000456040 C7orf61Q8IZ16 206 aa6.05□□□□□ -1.44
R3HDM1-212ENST00000456040 LINC01356Q8N9X3 169 aa6.05□□□□□ -1.44
R3HDM1-212ENST00000456040 LINC00116Q8NCU8 138 aa6.05□□□□□ -1.44
R3HDM1-212ENST00000456040 OR6P1Q8NGX9 317 aa6.05□□□□□ -1.44
R3HDM1-212ENST00000456040 SEC16BQ96JE7 1060 aa6.05□□□□□ -1.44
R3HDM1-212ENST00000456040 FOXP3Q9BZS1 431 aa6.05□□□□□ -1.44
R3HDM1-212ENST00000456040 ADAM7Q9H2U9 754 aa6.05□□□□□ -1.44
R3HDM1-212ENST00000456040 CHST7Q9NS84 486 aa6.05□□□□□ -1.44
R3HDM1-212ENST00000456040 CNOT11Q9UKZ1 510 aaKnown RBP6.05□□□□□ -1.44
R3HDM1-212ENST00000456040 INPP5FQ9Y2H2 1132 aa6.05□□□□□ -1.44
R3HDM1-212ENST00000456040 C9IYK1 514 aa6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 SYPP08247 313 aa6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 VIPR1P32241 457 aa6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 GIPRP48546 466 aa6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 NASPP49321 788 aaPredicted RBP6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 GALK1P51570 392 aa6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 EPHB3P54753 998 aa6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 ZNF827Q17R98 1081 aa6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 WAPLQ7Z5K2 1190 aa6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 NLRX1Q86UT6 975 aa6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 NLGN1Q8N2Q7 840 aa6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 SYT8Q8NBV8 401 aa6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 MZB1Q8WU39 189 aa6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 CPLX3Q8WVH0 158 aa6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 SHISA4Q96DD7 197 aa6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 PWWP2AQ96N64 755 aa6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 SRRTQ9BXP5 876 aaKnown RBP6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 ACBD3Q9H3P7 528 aa6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 CNTD2Q9H8S5 307 aa6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 GFOD1Q9NXC2 390 aa6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 ZNF281Q9Y2X9 895 aa6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 SLC12A7Q9Y666 1083 aa6.04□□□□□ -1.44
R3HDM1-212ENST00000456040 K7ESM1 405 aa6.03□□□□□ -1.44
R3HDM1-212ENST00000456040 ENDOUP21128 410 aaKnown RBP6.03□□□□□ -1.44
R3HDM1-212ENST00000456040 ARL4AP40617 200 aa6.03□□□□□ -1.44
R3HDM1-212ENST00000456040 ZYXQ15942 572 aaKnown RBP6.03□□□□□ -1.44
R3HDM1-212ENST00000456040 ANKRD39Q53RE8 183 aa6.03□□□□□ -1.44
R3HDM1-212ENST00000456040 TDRD10Q5VZ19 366 aaKnown RBP6.03□□□□□ -1.44
R3HDM1-212ENST00000456040 LINC01599Q8WXQ3 324 aa6.03□□□□□ -1.44
R3HDM1-212ENST00000456040 SRRDQ9UH36 339 aa6.03□□□□□ -1.44
R3HDM1-212ENST00000456040 MEIS1O00470 390 aa6.02□□□□□ -1.45
R3HDM1-212ENST00000456040 FKTNO75072 461 aa6.02□□□□□ -1.45
R3HDM1-212ENST00000456040 MPOP05164 745 aa6.02□□□□□ -1.45
R3HDM1-212ENST00000456040 ERCC5P28715 1186 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-212ENST00000456040 KCNC1P48547 511 aa6.02□□□□□ -1.45
R3HDM1-212ENST00000456040 NOL9Q5SY16 702 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-212ENST00000456040 UBXN11Q5T124 520 aa6.02□□□□□ -1.45
R3HDM1-212ENST00000456040 PPFIBP1Q86W92 1011 aa6.02□□□□□ -1.45
R3HDM1-212ENST00000456040 C19orf47Q8N9M1 422 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-212ENST00000456040 DSCC1Q9BVC3 393 aa6.02□□□□□ -1.45
R3HDM1-212ENST00000456040 ZNF214Q9UL59 606 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-212ENST00000456040 STRIP2Q9ULQ0 834 aa6.02□□□□□ -1.45
R3HDM1-212ENST00000456040 MINPP1Q9UNW1 487 aa6.02□□□□□ -1.45
R3HDM1-212ENST00000456040 IRS4O14654 1257 aaPredicted RBP6.01□□□□□ -1.45
R3HDM1-212ENST00000456040 SHOXO15266 292 aa6.01□□□□□ -1.45
R3HDM1-212ENST00000456040 NRDCO43847 1150 aa6.01□□□□□ -1.45
R3HDM1-212ENST00000456040 TP53P04637 393 aaPredicted RBP6.01□□□□□ -1.45
R3HDM1-212ENST00000456040 GSNP06396 782 aa6.01□□□□□ -1.45
R3HDM1-212ENST00000456040 TCF3P15923 654 aa6.01□□□□□ -1.45
R3HDM1-212ENST00000456040 PNLIPP16233 465 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms