RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 RLFQ13129 1914 aa11.01□□□□□ -0.65
ATXN3-205ENST00000454964 LOC102724159A0A0B4J2E5 919 aa11□□□□□ -0.65
ATXN3-205ENST00000454964 PNMA6FA0A0J9YX94 578 aa11□□□□□ -0.65
ATXN3-205ENST00000454964 ZBTB5O15062 677 aa11□□□□□ -0.65
ATXN3-205ENST00000454964 ICAM1P05362 532 aa11□□□□□ -0.65
ATXN3-205ENST00000454964 FCER1AP12319 257 aa11□□□□□ -0.65
ATXN3-205ENST00000454964 PDIA4P13667 645 aaKnown RBP11□□□□□ -0.65
ATXN3-205ENST00000454964 XBP1P17861 261 aa11□□□□□ -0.65
ATXN3-205ENST00000454964 LACTBP83111 547 aaPredicted RBP11□□□□□ -0.65
ATXN3-205ENST00000454964 PWP2Q15269 919 aaKnown RBP11□□□□□ -0.65
ATXN3-205ENST00000454964 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11□□□□□ -0.65
ATXN3-205ENST00000454964 AMNQ9BXJ7 453 aa11□□□□□ -0.65
ATXN3-205ENST00000454964 SPATC1LQ9H0A9 340 aa11□□□□□ -0.65
ATXN3-205ENST00000454964 RANBP17Q9H2T7 1088 aaKnown RBP11□□□□□ -0.65
ATXN3-205ENST00000454964 GPCPD1Q9NPB8 672 aa11□□□□□ -0.65
ATXN3-205ENST00000454964 MAD2L2Q9UI95 211 aa11□□□□□ -0.65
ATXN3-205ENST00000454964 NAP1L2Q9ULW6 460 aaPredicted RBP11□□□□□ -0.65
ATXN3-205ENST00000454964 MTMR7Q9Y216 660 aa11□□□□□ -0.65
ATXN3-205ENST00000454964 MRPL11Q9Y3B7 192 aaKnown RBP11□□□□□ -0.65
ATXN3-205ENST00000454964 TAF6LQ9Y6J9 622 aa11□□□□□ -0.65
ATXN3-205ENST00000454964 BAZ2BQ9UIF8 2168 aaKnown RBP11□□□□□ -0.65
ATXN3-205ENST00000454964 COL11A1P12107 1806 aaPredicted RBP11□□□□□ -0.65
ATXN3-205ENST00000454964 GOLGA8AA7E2F4 631 aa10.99□□□□□ -0.65
ATXN3-205ENST00000454964 GOLGA8BA8MQT2 603 aa10.99□□□□□ -0.65
ATXN3-205ENST00000454964 TNPO2O14787 897 aaKnown RBP10.99□□□□□ -0.65
ATXN3-205ENST00000454964 FMNL1O95466 1100 aaPredicted RBP10.99□□□□□ -0.65
ATXN3-205ENST00000454964 PDIA3P30101 505 aaKnown RBP10.99□□□□□ -0.65
ATXN3-205ENST00000454964 PLS1Q14651 629 aa10.99□□□□□ -0.65
ATXN3-205ENST00000454964 KCTD2Q14681 263 aa10.99□□□□□ -0.65
ATXN3-205ENST00000454964 KIAA1755Q5JYT7 1200 aa10.99□□□□□ -0.65
ATXN3-205ENST00000454964 MICU3Q86XE3 530 aa10.99□□□□□ -0.65
ATXN3-205ENST00000454964 FBXO11Q86XK2 927 aa10.99□□□□□ -0.65
ATXN3-205ENST00000454964 ADGRF4Q8IZF3 695 aa10.99□□□□□ -0.65
ATXN3-205ENST00000454964 NUDT12Q9BQG2 462 aa10.99□□□□□ -0.65
ATXN3-205ENST00000454964 PAGR1Q9BTK6 254 aa10.99□□□□□ -0.65
ATXN3-205ENST00000454964 UPF3BQ9BZI7 483 aaKnown RBP10.99□□□□□ -0.65
ATXN3-205ENST00000454964 EFCC1Q9HA90 598 aa10.99□□□□□ -0.65
ATXN3-205ENST00000454964 CPA4Q9UI42 421 aa10.99□□□□□ -0.65
ATXN3-205ENST00000454964 DIS3Q9Y2L1 958 aaKnown RBP10.99□□□□□ -0.65
ATXN3-205ENST00000454964 PFASO15067 1338 aa10.99□□□□□ -0.65
ATXN3-205ENST00000454964 ABCB11O95342 1321 aa10.99□□□□□ -0.65
ATXN3-205ENST00000454964 ADGRA2Q96PE1 1338 aa10.99□□□□□ -0.65
ATXN3-205ENST00000454964 NID2Q14112 1375 aa10.99□□□□□ -0.65
ATXN3-205ENST00000454964 CASP8AP2Q9UKL3 1982 aa10.99□□□□□ -0.65
ATXN3-205ENST00000454964 DOCK3Q8IZD9 2030 aa10.98□□□□□ -0.65
ATXN3-205ENST00000454964 SLC15A5A6NIM6 579 aa10.98□□□□□ -0.65
ATXN3-205ENST00000454964 XRCC5P13010 732 aaKnown RBP10.98□□□□□ -0.65
ATXN3-205ENST00000454964 PSMC4P43686 418 aa10.98□□□□□ -0.65
ATXN3-205ENST00000454964 APOBRQ0VD83 1088 aa10.98□□□□□ -0.65
ATXN3-205ENST00000454964 TOB2Q14106 344 aaPredicted RBP10.98□□□□□ -0.65
ATXN3-205ENST00000454964 TMEM132BQ14DG7 1078 aa10.98□□□□□ -0.65
ATXN3-205ENST00000454964 SNRNP48Q6IEG0 339 aaKnown RBP10.98□□□□□ -0.65
ATXN3-205ENST00000454964 PLEKHH3Q7Z736 793 aa10.98□□□□□ -0.65
ATXN3-205ENST00000454964 NBPF11Q86T75 865 aa10.98□□□□□ -0.65
ATXN3-205ENST00000454964 MSL3Q8N5Y2 521 aaKnown RBP10.98□□□□□ -0.65
ATXN3-205ENST00000454964 ZNF296Q8WUU4 475 aaPredicted RBP10.98□□□□□ -0.65
ATXN3-205ENST00000454964 ATG4CQ96DT6 458 aa10.98□□□□□ -0.65
ATXN3-205ENST00000454964 MTMR8Q96EF0 704 aa10.98□□□□□ -0.65
ATXN3-205ENST00000454964 NUP88Q99567 741 aaPredicted RBP10.98□□□□□ -0.65
ATXN3-205ENST00000454964 LLPHQ9BRT6 129 aaKnown RBP10.98□□□□□ -0.65
ATXN3-205ENST00000454964 RNF26Q9BY78 433 aaPredicted RBP10.98□□□□□ -0.65
ATXN3-205ENST00000454964 LRRC2Q9BYS8 371 aa10.98□□□□□ -0.65
ATXN3-205ENST00000454964 ACAD9Q9H845 621 aa10.98□□□□□ -0.65
ATXN3-205ENST00000454964 ZNF214Q9UL59 606 aaPredicted RBP10.98□□□□□ -0.65
ATXN3-205ENST00000454964 CCPG1Q9ULG6 757 aa10.98□□□□□ -0.65
ATXN3-205ENST00000454964 FOXN1O15353 648 aa10.97□□□□□ -0.65
ATXN3-205ENST00000454964 PRPF3O43395 683 aaKnown RBP10.97□□□□□ -0.65
ATXN3-205ENST00000454964 PFKFB2O60825 505 aa10.97□□□□□ -0.65
ATXN3-205ENST00000454964 GOLGA8HP0CJ92 632 aa10.97□□□□□ -0.65
ATXN3-205ENST00000454964 HSPA8P11142 646 aaKnown RBP10.97□□□□□ -0.65
ATXN3-205ENST00000454964 IFNAR1P17181 557 aa10.97□□□□□ -0.65
ATXN3-205ENST00000454964 AK2P54819 239 aa10.97□□□□□ -0.65
ATXN3-205ENST00000454964 SSRP1Q08945 709 aaKnown RBP10.97□□□□□ -0.65
ATXN3-205ENST00000454964 IRF5Q13568 498 aa10.97□□□□□ -0.65
ATXN3-205ENST00000454964 GALNT17Q6IS24 598 aa10.97□□□□□ -0.65
ATXN3-205ENST00000454964 TMTC3Q6ZXV5 915 aa10.97□□□□□ -0.65
ATXN3-205ENST00000454964 CTU1Q7Z7A3 348 aaKnown RBP10.97□□□□□ -0.65
ATXN3-205ENST00000454964 NCAPG2Q86XI2 1143 aa10.97□□□□□ -0.65
ATXN3-205ENST00000454964 CPXCR1Q8N123 301 aa10.97□□□□□ -0.65
ATXN3-205ENST00000454964 CUL5Q93034 780 aa10.97□□□□□ -0.65
ATXN3-205ENST00000454964 DDX11Q96FC9 970 aa10.97□□□□□ -0.65
ATXN3-205ENST00000454964 MOV10L1Q9BXT6 1211 aaKnown RBP10.97□□□□□ -0.65
ATXN3-205ENST00000454964 UBA5Q9GZZ9 404 aa10.97□□□□□ -0.65
ATXN3-205ENST00000454964 JMJD4Q9H9V9 463 aa10.97□□□□□ -0.65
ATXN3-205ENST00000454964 VAT1LQ9HCJ6 419 aa10.97□□□□□ -0.65
ATXN3-205ENST00000454964 FBXO28Q9NVF7 368 aa10.97□□□□□ -0.65
ATXN3-205ENST00000454964 ADD3Q9UEY8 706 aaKnown RBP10.97□□□□□ -0.65
ATXN3-205ENST00000454964 BRPF3Q9ULD4 1205 aa10.97□□□□□ -0.65
ATXN3-205ENST00000454964 FRMPD2Q68DX3 1309 aaPredicted RBP10.97□□□□□ -0.65
ATXN3-205ENST00000454964 A0A0G2JMZ2 1700 aa10.96□□□□□ -0.65
ATXN3-205ENST00000454964 DEXIO95424 95 aa10.96□□□□□ -0.65
ATXN3-205ENST00000454964 ERCC3P19447 782 aa10.96□□□□□ -0.65
ATXN3-205ENST00000454964 PTPREP23469 700 aa10.96□□□□□ -0.65
ATXN3-205ENST00000454964 GNA11P29992 359 aa10.96□□□□□ -0.65
ATXN3-205ENST00000454964 SLC16A2P36021 539 aa10.96□□□□□ -0.65
ATXN3-205ENST00000454964 RGS2P41220 211 aa10.96□□□□□ -0.65
ATXN3-205ENST00000454964 LBX1P52954 281 aa10.96□□□□□ -0.65
ATXN3-205ENST00000454964 HMGN5P82970 282 aaKnown RBP10.96□□□□□ -0.65
ATXN3-205ENST00000454964 CDC37Q16543 378 aaPredicted RBP10.96□□□□□ -0.65
ATXN3-205ENST00000454964 WDR78Q5VTH9 848 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms