RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 BAZ2BQ9UIF8 2168 aaKnown RBP7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 TCP10L2B9ZVM9 353 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 TPM3P06753 285 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 PFKFB1P16118 471 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 CLK2P49760 499 aaKnown RBP7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 NR5A1Q13285 461 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 SEPT2Q15019 361 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 CCDC96Q2M329 555 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 NOL9Q5SY16 702 aaKnown RBP7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 NT5DC1Q5TFE4 455 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 SYDE2Q5VT97 1194 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 NEK8Q86SG6 692 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 GAS2L3Q86XJ1 694 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 SIAH1Q8IUQ4 282 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 CCDC82Q8N4S0 544 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 CCSER1Q9C0I3 900 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 KIAA1468Q9P260 1216 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 TUBE1Q9UJT0 475 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 C19orf81C9J6K1 198 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 TBX3O15119 743 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 WDR46O15213 610 aaKnown RBP7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 SMC2O95347 1197 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 NDUFB10O96000 172 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 GH2P01242 217 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 FOSBP53539 338 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 GHRHRQ02643 423 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 TYRO3Q06418 890 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 PDIA5Q14554 519 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 MICALL2Q8IY33 904 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 CMTR1Q8N1G2 835 aaKnown RBP7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 LRRC47Q8N1G4 583 aaKnown RBP7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 OXER1Q8TDS5 423 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 CHAMP1Q96JM3 812 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 TEPSINQ96N21 525 aa7.78□□□□□ -1.16
ECHDC1-210ENST00000454859 ABCB11O95342 1321 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 MYPNQ86TC9 1320 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 LOXHD1Q8IVV2 1947 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 CYP3A7-CYP3A51PA0A087WV96 503 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 PHF20L1A8MW92 1017 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 CYP3A7P24462 503 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 PPP1R2P41236 205 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 NDUFA8P51970 172 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 STAT2P52630 851 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 TPM4P67936 248 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 CEBPZQ03701 1054 aaKnown RBP7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 RASA3Q14644 834 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 SLC35G1Q2M3R5 365 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 SHC4Q6S5L8 630 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 KRBA2Q6ZNG9 492 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 IQUBQ8NA54 791 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 SHISA4Q96DD7 197 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 L3MBTL3Q96JM7 780 aaPredicted RBP7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 PDLIM2Q96JY6 352 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 C12orf42Q96LP6 360 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 PIGSQ96S52 555 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 LRRC27Q9C0I9 530 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 GOLPH3LQ9H4A5 285 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 VEZTQ9HBM0 779 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 ADARB2Q9NS39 739 aaKnown RBP7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 GJB4Q9NTQ9 266 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 ZBTB12Q9Y330 459 aaPredicted RBP7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 PCDHB6Q9Y5E3 794 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 PARP14Q460N5 1801 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 SMTNL1A8MU46 457 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 GRIN3BO60391 1043 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 SLFN14P0C7P3 912 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 LMOD1P29536 600 aaPredicted RBP7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 FXR2P51116 673 aaKnown RBP eCLIP7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 CACNB3P54284 484 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 PTGDRQ13258 359 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 SLC4A8Q2Y0W8 1093 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 DTHD1Q6ZMT9 781 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 PIK3AP1Q6ZUJ8 805 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 FBXO11Q86XK2 927 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 CEP57L1Q8IYX8 460 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 C4orf32Q8N8J7 132 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 MBOAT7Q96N66 472 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 RANBP17Q9H2T7 1088 aaKnown RBP7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 PSTPIP2Q9H939 334 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 CCDC39Q9UFE4 941 aa7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 MRPL11Q9Y3B7 192 aaKnown RBP7.77□□□□□ -1.17
ECHDC1-210ENST00000454859 PHIPQ8WWQ0 1821 aa7.76□□□□□ -1.17
ECHDC1-210ENST00000454859 PAPPA2Q9BXP8 1791 aa7.76□□□□□ -1.17
ECHDC1-210ENST00000454859 CLRN2A0PK11 232 aa7.76□□□□□ -1.17
ECHDC1-210ENST00000454859 IKBKBO14920 756 aa7.76□□□□□ -1.17
ECHDC1-210ENST00000454859 ABCB7O75027 752 aa7.76□□□□□ -1.17
ECHDC1-210ENST00000454859 OAZ1P54368 228 aa7.76□□□□□ -1.17
ECHDC1-210ENST00000454859 NLRP12P59046 1061 aa7.76□□□□□ -1.17
ECHDC1-210ENST00000454859 TMEM266Q2M3C6 531 aa7.76□□□□□ -1.17
ECHDC1-210ENST00000454859 SARM1Q6SZW1 724 aa7.76□□□□□ -1.17
ECHDC1-210ENST00000454859 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.76□□□□□ -1.17
ECHDC1-210ENST00000454859 SPATA20Q8TB22 786 aa7.76□□□□□ -1.17
ECHDC1-210ENST00000454859 RBM46Q8TBY0 533 aaKnown RBP7.76□□□□□ -1.17
ECHDC1-210ENST00000454859 GSDMAQ96QA5 445 aa7.76□□□□□ -1.17
ECHDC1-210ENST00000454859 RBSNQ9H1K0 784 aa7.76□□□□□ -1.17
ECHDC1-210ENST00000454859 PPP1R1BQ9UD71 204 aaPredicted RBP7.76□□□□□ -1.17
ECHDC1-210ENST00000454859 PCDHAC2Q9Y5I4 1007 aa7.76□□□□□ -1.17
ECHDC1-210ENST00000454859 MYH7BA7E2Y1 1941 aa7.76□□□□□ -1.17
ECHDC1-210ENST00000454859 A0A1B0GVL5 298 aa7.75□□□□□ -1.17
ECHDC1-210ENST00000454859 CYP3A4P08684 503 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms