RNA–Protein interactions for RNA: ENST00000453937.2

LAMA4-209, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-209ENST00000453937 TBC1D8O95759 1140 aa16.89■□□□□ 0.29
LAMA4-209ENST00000453937 OAZ1P54368 228 aa16.89■□□□□ 0.29
LAMA4-209ENST00000453937 IKQ13123 557 aaPredicted RBP16.89■□□□□ 0.29
LAMA4-209ENST00000453937 CUL4AQ13619 759 aa16.89■□□□□ 0.29
LAMA4-209ENST00000453937 PKN1Q16512 942 aa16.89■□□□□ 0.29
LAMA4-209ENST00000453937 FAM110CQ1W6H9 321 aa16.89■□□□□ 0.29
LAMA4-209ENST00000453937 QRICH1Q2TAL8 776 aa16.89■□□□□ 0.29
LAMA4-209ENST00000453937 NOM1Q5C9Z4 860 aaKnown RBP16.89■□□□□ 0.29
LAMA4-209ENST00000453937 NSUN7Q8NE18 718 aaKnown RBP16.89■□□□□ 0.29
LAMA4-209ENST00000453937 PIGSQ96S52 555 aa16.89■□□□□ 0.29
LAMA4-209ENST00000453937 CPA4Q9UI42 421 aa16.89■□□□□ 0.29
LAMA4-209ENST00000453937 ISY1Q9ULR0 285 aaKnown RBP16.89■□□□□ 0.29
LAMA4-209ENST00000453937 MYH6P13533 1939 aa16.88■□□□□ 0.29
LAMA4-209ENST00000453937 PRPF3O43395 683 aaKnown RBP16.88■□□□□ 0.29
LAMA4-209ENST00000453937 ZBED4O75132 1171 aa16.88■□□□□ 0.29
LAMA4-209ENST00000453937 ERVK-9P63128 1117 aa16.88■□□□□ 0.29
LAMA4-209ENST00000453937 ERVK-24P63145 666 aa16.88■□□□□ 0.29
LAMA4-209ENST00000453937 CDC37Q16543 378 aaPredicted RBP16.88■□□□□ 0.29
LAMA4-209ENST00000453937 CCDC82Q8N4S0 544 aa16.88■□□□□ 0.29
LAMA4-209ENST00000453937 ANKRD13CQ8N6S4 541 aa16.88■□□□□ 0.29
LAMA4-209ENST00000453937 SMCR8Q8TEV9 937 aaPredicted RBP16.88■□□□□ 0.29
LAMA4-209ENST00000453937 AGBL1Q96MI9 1066 aa16.88■□□□□ 0.29
LAMA4-209ENST00000453937 VAT1LQ9HCJ6 419 aa16.88■□□□□ 0.29
LAMA4-209ENST00000453937 PNMA6FA0A0J9YX94 578 aa16.87■□□□□ 0.29
LAMA4-209ENST00000453937 ZBTB5O15062 677 aa16.87■□□□□ 0.29
LAMA4-209ENST00000453937 DTNBO60941 627 aa16.87■□□□□ 0.29
LAMA4-209ENST00000453937 ICAM1P05362 532 aa16.87■□□□□ 0.29
LAMA4-209ENST00000453937 FDPSP14324 419 aaKnown RBP16.87■□□□□ 0.29
LAMA4-209ENST00000453937 TAL1P17542 331 aaPredicted RBP16.87■□□□□ 0.29
LAMA4-209ENST00000453937 CAP1Q01518 475 aa16.87■□□□□ 0.29
LAMA4-209ENST00000453937 SAMD1Q6SPF0 538 aaPredicted RBP16.87■□□□□ 0.29
LAMA4-209ENST00000453937 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.87■□□□□ 0.29
LAMA4-209ENST00000453937 RIOX2Q8IUF8 465 aa16.87■□□□□ 0.29
LAMA4-209ENST00000453937 CCDC83Q8IWF9 413 aa16.87■□□□□ 0.29
LAMA4-209ENST00000453937 SMARCC2Q8TAQ2 1214 aa16.87■□□□□ 0.29
LAMA4-209ENST00000453937 PHKBQ93100 1093 aa16.87■□□□□ 0.29
LAMA4-209ENST00000453937 MOV10L1Q9BXT6 1211 aaKnown RBP16.87■□□□□ 0.29
LAMA4-209ENST00000453937 RNF26Q9BY78 433 aaPredicted RBP16.87■□□□□ 0.29
LAMA4-209ENST00000453937 SPATC1LQ9H0A9 340 aa16.87■□□□□ 0.29
LAMA4-209ENST00000453937 RAVER2Q9HCJ3 691 aaKnown RBP16.87■□□□□ 0.29
LAMA4-209ENST00000453937 RIPK3Q9Y572 518 aa16.87■□□□□ 0.29
LAMA4-209ENST00000453937 V9GY48 417 aaPredicted RBP16.87■□□□□ 0.29
LAMA4-209ENST00000453937 hCG_1642624A0A1W2PR95 340 aa16.86■□□□□ 0.29
LAMA4-209ENST00000453937 K7ELQ4 463 aaPredicted RBP16.86■□□□□ 0.29
LAMA4-209ENST00000453937 FMNL1O95466 1100 aaPredicted RBP16.86■□□□□ 0.29
LAMA4-209ENST00000453937 STAT3P40763 770 aa16.86■□□□□ 0.29
LAMA4-209ENST00000453937 GPRC5AQ8NFJ5 357 aa16.86■□□□□ 0.29
LAMA4-209ENST00000453937 SHISA4Q96DD7 197 aa16.86■□□□□ 0.29
LAMA4-209ENST00000453937 PAGR1Q9BTK6 254 aa16.86■□□□□ 0.29
LAMA4-209ENST00000453937 TSHZ2Q9NRE2 1034 aa16.86■□□□□ 0.29
LAMA4-209ENST00000453937 STK36Q9NRP7 1315 aa16.86■□□□□ 0.29
LAMA4-209ENST00000453937 ZSWIM8A7E2V4 1837 aa16.86■□□□□ 0.29
LAMA4-209ENST00000453937 MGAMO43451 1857 aa16.85■□□□□ 0.29
LAMA4-209ENST00000453937 OPLAHO14841 1288 aa16.85■□□□□ 0.29
LAMA4-209ENST00000453937 DHX16O60231 1041 aaKnown RBP16.85■□□□□ 0.29
LAMA4-209ENST00000453937 JAK2O60674 1132 aa16.85■□□□□ 0.29
LAMA4-209ENST00000453937 PPFIA3O75145 1194 aa16.85■□□□□ 0.29
LAMA4-209ENST00000453937 CTGFP29279 349 aa16.85■□□□□ 0.29
LAMA4-209ENST00000453937 CCDC174Q6PII3 467 aa16.85■□□□□ 0.29
LAMA4-209ENST00000453937 SHCBP1Q8NEM2 672 aa16.85■□□□□ 0.29
LAMA4-209ENST00000453937 RRP36Q96EU6 259 aaKnown RBP16.85■□□□□ 0.29
LAMA4-209ENST00000453937 LLPHQ9BRT6 129 aaKnown RBP16.85■□□□□ 0.29
LAMA4-209ENST00000453937 TEX13BQ9BXU2 312 aa16.85■□□□□ 0.29
LAMA4-209ENST00000453937 PORCNQ9H237 461 aa16.85■□□□□ 0.29
LAMA4-209ENST00000453937 GPR25O00155 361 aa16.84■□□□□ 0.29
LAMA4-209ENST00000453937 CPLX1O14810 134 aa16.84■□□□□ 0.29
LAMA4-209ENST00000453937 PFKFB3Q16875 520 aaPredicted RBP16.84■□□□□ 0.29
LAMA4-209ENST00000453937 SNRNP48Q6IEG0 339 aaKnown RBP16.84■□□□□ 0.29
LAMA4-209ENST00000453937 TYW1BQ6NUM6 668 aa16.84■□□□□ 0.29
LAMA4-209ENST00000453937 FBXO11Q86XK2 927 aa16.84■□□□□ 0.29
LAMA4-209ENST00000453937 HOMER1Q86YM7 354 aa16.84■□□□□ 0.29
LAMA4-209ENST00000453937 CPXCR1Q8N123 301 aa16.84■□□□□ 0.29
LAMA4-209ENST00000453937 CLEC4DQ8WXI8 215 aa16.84■□□□□ 0.29
LAMA4-209ENST00000453937 PLXNB2O15031 1838 aa16.84■□□□□ 0.29
LAMA4-209ENST00000453937 PTPDC1A2A3K4 754 aa16.83■□□□□ 0.28
LAMA4-209ENST00000453937 SLC25A27O95847 323 aa16.83■□□□□ 0.28
LAMA4-209ENST00000453937 SSRP1Q08945 709 aaKnown RBP16.83■□□□□ 0.28
LAMA4-209ENST00000453937 TKFCQ3LXA3 575 aa16.83■□□□□ 0.28
LAMA4-209ENST00000453937 MUM1L1Q5H9M0 696 aa16.83■□□□□ 0.28
LAMA4-209ENST00000453937 WWC2Q6AWC2 1192 aa16.83■□□□□ 0.28
LAMA4-209ENST00000453937 PIBF1Q8WXW3 757 aa16.83■□□□□ 0.28
LAMA4-209ENST00000453937 AMNQ9BXJ7 453 aa16.83■□□□□ 0.28
LAMA4-209ENST00000453937 SLC26A6Q9BXS9 759 aa16.83■□□□□ 0.28
LAMA4-209ENST00000453937 EFCC1Q9HA90 598 aa16.83■□□□□ 0.28
LAMA4-209ENST00000453937 CCPG1Q9ULG6 757 aa16.83■□□□□ 0.28
LAMA4-209ENST00000453937 STXBP3O00186 592 aa16.82■□□□□ 0.28
LAMA4-209ENST00000453937 CDKL5O76039 1030 aa16.82■□□□□ 0.28
LAMA4-209ENST00000453937 SCG2P13521 617 aa16.82■□□□□ 0.28
LAMA4-209ENST00000453937 ERCC3P19447 782 aa16.82■□□□□ 0.28
LAMA4-209ENST00000453937 LACTBP83111 547 aaPredicted RBP16.82■□□□□ 0.28
LAMA4-209ENST00000453937 GHRHRQ02643 423 aa16.82■□□□□ 0.28
LAMA4-209ENST00000453937 CPLX2Q6PUV4 134 aaKnown RBP16.82■□□□□ 0.28
LAMA4-209ENST00000453937 COA7Q96BR5 231 aa16.82■□□□□ 0.28
LAMA4-209ENST00000453937 AIFM3Q96NN9 605 aa16.82■□□□□ 0.28
LAMA4-209ENST00000453937 RBM27Q9P2N5 1060 aaKnown RBP16.82■□□□□ 0.28
LAMA4-209ENST00000453937 TSKSQ9UJT2 592 aa16.82■□□□□ 0.28
LAMA4-209ENST00000453937 PNMA2Q9UL42 364 aa16.82■□□□□ 0.28
LAMA4-209ENST00000453937 PCDHA1Q9Y5I3 950 aa16.82■□□□□ 0.28
LAMA4-209ENST00000453937 DOCK3Q8IZD9 2030 aa16.82■□□□□ 0.28
LAMA4-209ENST00000453937 LCTP09848 1927 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms