RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 TTLL1O95922 423 aa9.7□□□□□ -0.86
LMO3-210ENST00000453727 GOLGA8HP0CJ92 632 aa9.7□□□□□ -0.86
LMO3-210ENST00000453727 TPRNQ4KMQ1 711 aa9.7□□□□□ -0.86
LMO3-210ENST00000453727 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.7□□□□□ -0.86
LMO3-210ENST00000453727 LRRC47Q8N1G4 583 aaKnown RBP9.7□□□□□ -0.86
LMO3-210ENST00000453727 FTOQ9C0B1 505 aaKnown RBP eCLIP9.7□□□□□ -0.86
LMO3-210ENST00000453727 ADARB2Q9NS39 739 aaKnown RBP9.7□□□□□ -0.86
LMO3-210ENST00000453727 ARGLU1Q9NWB6 273 aaPredicted RBP9.7□□□□□ -0.86
LMO3-210ENST00000453727 GGA3Q9NZ52 723 aa9.7□□□□□ -0.86
LMO3-210ENST00000453727 CLIP2Q9UDT6 1046 aa9.7□□□□□ -0.86
LMO3-210ENST00000453727 PGAP2Q9UHJ9 254 aa9.7□□□□□ -0.86
LMO3-210ENST00000453727 KCNJ14Q9UNX9 436 aa9.7□□□□□ -0.86
LMO3-210ENST00000453727 FHOD1Q9Y613 1164 aa9.7□□□□□ -0.86
LMO3-210ENST00000453727 GLTPD2A6NH11 291 aa9.69□□□□□ -0.86
LMO3-210ENST00000453727 RRP1BQ14684 758 aaKnown RBP9.69□□□□□ -0.86
LMO3-210ENST00000453727 SLC35G1Q2M3R5 365 aa9.69□□□□□ -0.86
LMO3-210ENST00000453727 USP17L2Q6R6M4 530 aa9.69□□□□□ -0.86
LMO3-210ENST00000453727 TEPSINQ96N21 525 aa9.69□□□□□ -0.86
LMO3-210ENST00000453727 USP17L5A8MUK1 530 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 MMP1P03956 469 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 PNMA6AP0CW24 399 aaPredicted RBP9.68□□□□□ -0.86
LMO3-210ENST00000453727 VEGFAP15692 232 aaPredicted RBP9.68□□□□□ -0.86
LMO3-210ENST00000453727 MAGEA9P43362 315 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 JAG1P78504 1218 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 CEBPZQ03701 1054 aaKnown RBP9.68□□□□□ -0.86
LMO3-210ENST00000453727 TMCO3Q6UWJ1 677 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 APOBEC3FQ8IUX4 373 aaKnown RBP9.68□□□□□ -0.86
LMO3-210ENST00000453727 LEO1Q8WVC0 666 aaPredicted RBP9.68□□□□□ -0.86
LMO3-210ENST00000453727 L3MBTL3Q96JM7 780 aaPredicted RBP9.68□□□□□ -0.86
LMO3-210ENST00000453727 SPATA32Q96LK8 384 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 USP28Q96RU2 1077 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 SCAND2PQ9GZW5 306 aaPredicted RBP9.68□□□□□ -0.86
LMO3-210ENST00000453727 CPVLQ9H3G5 476 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 VPS54Q9P1Q0 977 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 SUFUQ9UMX1 484 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 AP5Z1O43299 807 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 CYTH3O43739 400 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 TBC1D12O60347 775 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 PARP1P09874 1014 aaKnown RBP9.68□□□□□ -0.86
LMO3-210ENST00000453727 PDHBP11177 359 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 PLA2G4AP47712 749 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 GNAQP50148 359 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 ATP2B2Q01814 1243 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 LRMPQ12912 555 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 SEPT2Q15019 361 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 ABCB5Q2M3G0 1257 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 MYSM1Q5VVJ2 828 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 BRAPQ7Z569 592 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 SMARCE1Q969G3 411 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 CFAP45Q9UL16 551 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 ELP1O95163 1332 aa9.68□□□□□ -0.86
LMO3-210ENST00000453727 BTBD18B2RXH4 712 aa9.67□□□□□ -0.86
LMO3-210ENST00000453727 KLRF2D3W0D1 207 aa9.67□□□□□ -0.86
LMO3-210ENST00000453727 CCDC192P0DO97 292 aa9.67□□□□□ -0.86
LMO3-210ENST00000453727 SCG2P13521 617 aa9.67□□□□□ -0.86
LMO3-210ENST00000453727 UBE2HP62256 183 aa9.67□□□□□ -0.86
LMO3-210ENST00000453727 PFKFB3Q16875 520 aaPredicted RBP9.67□□□□□ -0.86
LMO3-210ENST00000453727 TMEM179Q6ZVK1 233 aa9.67□□□□□ -0.86
LMO3-210ENST00000453727 DIS3L2Q8IYB7 885 aaKnown RBP9.67□□□□□ -0.86
LMO3-210ENST00000453727 ZNF396Q96N95 335 aaPredicted RBP9.67□□□□□ -0.86
LMO3-210ENST00000453727 CABP5Q9NP86 173 aa9.67□□□□□ -0.86
LMO3-210ENST00000453727 MED4Q9NPJ6 270 aa9.67□□□□□ -0.86
LMO3-210ENST00000453727 GH2P01242 217 aa9.67□□□□□ -0.86
LMO3-210ENST00000453727 SNHG28P0DPA3 235 aa9.67□□□□□ -0.86
LMO3-210ENST00000453727 EEF2P13639 858 aaKnown RBP9.67□□□□□ -0.86
LMO3-210ENST00000453727 H2AFXP16104 143 aaPredicted RBP9.67□□□□□ -0.86
LMO3-210ENST00000453727 GNL2Q13823 731 aaKnown RBP9.67□□□□□ -0.86
LMO3-210ENST00000453727 NBPF12Q5TAG4 269 aaPredicted RBP9.67□□□□□ -0.86
LMO3-210ENST00000453727 PRAMEF18Q5VWM3 479 aa9.67□□□□□ -0.86
LMO3-210ENST00000453727 ATL3Q6DD88 541 aa9.67□□□□□ -0.86
LMO3-210ENST00000453727 SIAH1Q8IUQ4 282 aa9.67□□□□□ -0.86
LMO3-210ENST00000453727 PHF20Q9BVI0 1012 aa9.67□□□□□ -0.86
LMO3-210ENST00000453727 KANSL2Q9H9L4 492 aa9.67□□□□□ -0.86
LMO3-210ENST00000453727 FRMPD2Q68DX3 1309 aaPredicted RBP9.67□□□□□ -0.86
LMO3-210ENST00000453727 POLR2AP24928 1970 aaKnown RBP9.67□□□□□ -0.86
LMO3-210ENST00000453727 IVLP07476 585 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 XBP1P17861 261 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 EPHX2P34913 555 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 CLCN6P51797 869 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 MAP3K10Q02779 954 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 ICA1Q05084 483 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 NR5A1Q13285 461 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 SAFBQ15424 915 aaKnown RBP eCLIP9.66□□□□□ -0.86
LMO3-210ENST00000453727 LEKR1Q6ZMV7 388 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 OXER1Q8TDS5 423 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 PPM1EQ8WY54 764 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 MKL1Q969V6 931 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 LZTS2Q9BRK4 669 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 SPZ1Q9BXG8 430 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 NYAP2Q9P242 653 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 RCOR1Q9UKL0 485 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 MAP2K2P36507 400 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 E2F4Q16254 413 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 FILIP1Q7Z7B0 1213 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 PACS2Q86VP3 889 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 NOSTRINQ8IVI9 506 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 ANKRD20A12PQ8NF67 263 aa9.66□□□□□ -0.86
LMO3-210ENST00000453727 GPKOWQ92917 476 aaPredicted RBP eCLIP9.66□□□□□ -0.86
LMO3-210ENST00000453727 DCPSQ96C86 337 aaKnown RBP9.66□□□□□ -0.86
LMO3-210ENST00000453727 TRIM5Q9C035 493 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms