RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 PARP14Q460N5 1801 aa16.98■□□□□ 0.31
NCKIPSD-207ENST00000453349 CCDC196A0A1B0GTZ2 297 aa16.98■□□□□ 0.31
NCKIPSD-207ENST00000453349 GOLGA8AA7E2F4 631 aa16.98■□□□□ 0.31
NCKIPSD-207ENST00000453349 GOLGA8BA8MQT2 603 aa16.98■□□□□ 0.31
NCKIPSD-207ENST00000453349 ERCC3P19447 782 aa16.98■□□□□ 0.31
NCKIPSD-207ENST00000453349 METAP2P50579 478 aaKnown RBP eCLIP16.98■□□□□ 0.31
NCKIPSD-207ENST00000453349 EVCP57679 992 aa16.98■□□□□ 0.31
NCKIPSD-207ENST00000453349 PLEKHH3Q7Z736 793 aa16.98■□□□□ 0.31
NCKIPSD-207ENST00000453349 CTU1Q7Z7A3 348 aaKnown RBP16.98■□□□□ 0.31
NCKIPSD-207ENST00000453349 IL27Q8NEV9 243 aa16.98■□□□□ 0.31
NCKIPSD-207ENST00000453349 ZNF274Q96GC6 653 aaPredicted RBP16.98■□□□□ 0.31
NCKIPSD-207ENST00000453349 TRIM47Q96LD4 638 aa16.98■□□□□ 0.31
NCKIPSD-207ENST00000453349 TBC1D32Q96NH3 1257 aa16.98■□□□□ 0.31
NCKIPSD-207ENST00000453349 PORCNQ9H237 461 aa16.98■□□□□ 0.31
NCKIPSD-207ENST00000453349 RIOX1Q9H6W3 641 aa16.98■□□□□ 0.31
NCKIPSD-207ENST00000453349 STRNO43815 780 aa16.97■□□□□ 0.31
NCKIPSD-207ENST00000453349 ICAM1P05362 532 aa16.97■□□□□ 0.31
NCKIPSD-207ENST00000453349 CTGFP29279 349 aa16.97■□□□□ 0.31
NCKIPSD-207ENST00000453349 PRMT2P55345 433 aa16.97■□□□□ 0.31
NCKIPSD-207ENST00000453349 RTN1Q16799 776 aa16.97■□□□□ 0.31
NCKIPSD-207ENST00000453349 TKFCQ3LXA3 575 aa16.97■□□□□ 0.31
NCKIPSD-207ENST00000453349 GPR142Q7Z601 462 aa16.97■□□□□ 0.31
NCKIPSD-207ENST00000453349 AGBL1Q96MI9 1066 aa16.97■□□□□ 0.31
NCKIPSD-207ENST00000453349 LARP6Q9BRS8 491 aaKnown RBP16.97■□□□□ 0.31
NCKIPSD-207ENST00000453349 JMJD4Q9H9V9 463 aa16.97■□□□□ 0.31
NCKIPSD-207ENST00000453349 CCPG1Q9ULG6 757 aa16.97■□□□□ 0.31
NCKIPSD-207ENST00000453349 A0A0G2JMZ2 1700 aa16.96■□□□□ 0.31
NCKIPSD-207ENST00000453349 ALAS1P13196 640 aa16.96■□□□□ 0.31
NCKIPSD-207ENST00000453349 PDIA3P30101 505 aaKnown RBP16.96■□□□□ 0.31
NCKIPSD-207ENST00000453349 AK2P54819 239 aa16.96■□□□□ 0.31
NCKIPSD-207ENST00000453349 TRAF1Q13077 416 aa16.96■□□□□ 0.31
NCKIPSD-207ENST00000453349 PKN2Q16513 984 aaKnown RBP16.96■□□□□ 0.31
NCKIPSD-207ENST00000453349 CDC37Q16543 378 aaPredicted RBP16.96■□□□□ 0.31
NCKIPSD-207ENST00000453349 OTOP1Q7RTM1 612 aa16.96■□□□□ 0.31
NCKIPSD-207ENST00000453349 CHST13Q8NET6 341 aa16.96■□□□□ 0.31
NCKIPSD-207ENST00000453349 KIF2CQ99661 725 aa16.96■□□□□ 0.31
NCKIPSD-207ENST00000453349 FBXO40Q9UH90 709 aa16.96■□□□□ 0.31
NCKIPSD-207ENST00000453349 COL11A1P12107 1806 aaPredicted RBP16.96■□□□□ 0.3
NCKIPSD-207ENST00000453349 ZNF536O15090 1300 aa16.96■□□□□ 0.3
NCKIPSD-207ENST00000453349 ZBTB5O15062 677 aa16.95■□□□□ 0.3
NCKIPSD-207ENST00000453349 FCER1AP12319 257 aa16.95■□□□□ 0.3
NCKIPSD-207ENST00000453349 PTPREP23469 700 aa16.95■□□□□ 0.3
NCKIPSD-207ENST00000453349 RABEP1Q15276 862 aa16.95■□□□□ 0.3
NCKIPSD-207ENST00000453349 NBPF11Q86T75 865 aa16.95■□□□□ 0.3
NCKIPSD-207ENST00000453349 FBXO11Q86XK2 927 aa16.95■□□□□ 0.3
NCKIPSD-207ENST00000453349 CCDC82Q8N4S0 544 aa16.95■□□□□ 0.3
NCKIPSD-207ENST00000453349 SRBD1Q8N5C6 995 aaKnown RBP16.95■□□□□ 0.3
NCKIPSD-207ENST00000453349 RRP36Q96EU6 259 aaKnown RBP16.95■□□□□ 0.3
NCKIPSD-207ENST00000453349 TRERF1Q96PN7 1200 aa16.95■□□□□ 0.3
NCKIPSD-207ENST00000453349 NUDT12Q9BQG2 462 aa16.95■□□□□ 0.3
NCKIPSD-207ENST00000453349 SPZ1Q9BXG8 430 aa16.95■□□□□ 0.3
NCKIPSD-207ENST00000453349 SRRDQ9UH36 339 aa16.95■□□□□ 0.3
NCKIPSD-207ENST00000453349 RIPK3Q9Y572 518 aa16.95■□□□□ 0.3
NCKIPSD-207ENST00000453349 PNMA6FA0A0J9YX94 578 aa16.94■□□□□ 0.3
NCKIPSD-207ENST00000453349 SLC15A5A6NIM6 579 aa16.94■□□□□ 0.3
NCKIPSD-207ENST00000453349 PLEKHA8P1O95397 391 aa16.94■□□□□ 0.3
NCKIPSD-207ENST00000453349 CAP1Q01518 475 aa16.94■□□□□ 0.3
NCKIPSD-207ENST00000453349 QRICH1Q2TAL8 776 aa16.94■□□□□ 0.3
NCKIPSD-207ENST00000453349 TMTC3Q6ZXV5 915 aa16.94■□□□□ 0.3
NCKIPSD-207ENST00000453349 HOMER1Q86YM7 354 aa16.94■□□□□ 0.3
NCKIPSD-207ENST00000453349 CMTR1Q8N1G2 835 aaKnown RBP16.94■□□□□ 0.3
NCKIPSD-207ENST00000453349 MTMR8Q96EF0 704 aa16.94■□□□□ 0.3
NCKIPSD-207ENST00000453349 PIGSQ96S52 555 aa16.94■□□□□ 0.3
NCKIPSD-207ENST00000453349 MMP19Q99542 508 aa16.94■□□□□ 0.3
NCKIPSD-207ENST00000453349 AMNQ9BXJ7 453 aa16.94■□□□□ 0.3
NCKIPSD-207ENST00000453349 SLKQ9H2G2 1235 aaPredicted RBP16.94■□□□□ 0.3
NCKIPSD-207ENST00000453349 HOMER2Q9NSB8 354 aa16.94■□□□□ 0.3
NCKIPSD-207ENST00000453349 SEC63Q9UGP8 760 aaKnown RBP16.94■□□□□ 0.3
NCKIPSD-207ENST00000453349 HPS5Q9UPZ3 1129 aa16.94■□□□□ 0.3
NCKIPSD-207ENST00000453349 CASP8AP2Q9UKL3 1982 aa16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 CYTH3O43739 400 aa16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 ST18O60284 1047 aa16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 CDC27P30260 824 aa16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 ADD1P35611 737 aaKnown RBP16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 CCT2P78371 535 aaKnown RBP16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 STK3Q13188 491 aa16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 KCTD2Q14681 263 aa16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 USH1GQ495M9 461 aa16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 ABRAQ8N0Z2 381 aa16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 RAET1EQ8TD07 263 aa16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 SOCS4Q8WXH5 440 aa16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 PIBF1Q8WXW3 757 aa16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 DDX11Q96FC9 970 aa16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 ACAD9Q9H845 621 aa16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 RNF146Q9NTX7 359 aa16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 FAM217BQ9NTX9 383 aaPredicted RBP16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 SLC5A4Q9NY91 659 aa16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 TPCN1Q9ULQ1 816 aa16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 GABRQQ9UN88 632 aa16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 PTPN22Q9Y2R2 807 aa16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 MGAMO43451 1857 aa16.93■□□□□ 0.3
NCKIPSD-207ENST00000453349 FLT3LGP49771 235 aa16.92■□□□□ 0.3
NCKIPSD-207ENST00000453349 PRKCZQ05513 592 aa16.92■□□□□ 0.3
NCKIPSD-207ENST00000453349 MORN1Q5T089 497 aa16.92■□□□□ 0.3
NCKIPSD-207ENST00000453349 CPLX2Q6PUV4 134 aaKnown RBP16.92■□□□□ 0.3
NCKIPSD-207ENST00000453349 NOL8Q76FK4 1167 aaKnown RBP16.92■□□□□ 0.3
NCKIPSD-207ENST00000453349 DPP9Q86TI2 863 aa16.92■□□□□ 0.3
NCKIPSD-207ENST00000453349 ANKRD35Q8N283 1001 aa16.92■□□□□ 0.3
NCKIPSD-207ENST00000453349 GJD2Q9UKL4 321 aa16.92■□□□□ 0.3
NCKIPSD-207ENST00000453349 LIMCH1Q9UPQ0 1083 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms