RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 GDF15Q99988 308 aa25.48■■□□□ 1.67
C9orf3-208ENST00000451893 PRO3102Q9H379 93 aa25.48■■□□□ 1.67
C9orf3-208ENST00000451893 IL17RBQ9NRM6 502 aa25.48■■□□□ 1.67
C9orf3-208ENST00000451893 SYNGAP1Q96PV0 1343 aa25.47■■□□□ 1.67
C9orf3-208ENST00000451893 ALAS1P13196 640 aa25.47■■□□□ 1.67
C9orf3-208ENST00000451893 BMP8BP34820 402 aa25.47■■□□□ 1.67
C9orf3-208ENST00000451893 MDM2Q00987 491 aaPredicted RBP25.47■■□□□ 1.67
C9orf3-208ENST00000451893 DCAF4Q8WV16 495 aa25.47■■□□□ 1.67
C9orf3-208ENST00000451893 PRDM5Q9NQX1 630 aaPredicted RBP25.47■■□□□ 1.67
C9orf3-208ENST00000451893 RNF146Q9NTX7 359 aa25.47■■□□□ 1.67
C9orf3-208ENST00000451893 FAM184BQ9ULE4 1060 aa25.47■■□□□ 1.67
C9orf3-208ENST00000451893 ZNF213O14771 459 aa25.46■■□□□ 1.67
C9orf3-208ENST00000451893 TOP1P11387 765 aaKnown RBP25.46■■□□□ 1.67
C9orf3-208ENST00000451893 PCP11498 1178 aaKnown RBP25.46■■□□□ 1.67
C9orf3-208ENST00000451893 TAL1P17542 331 aaPredicted RBP25.46■■□□□ 1.67
C9orf3-208ENST00000451893 ADCYAP1R1P41586 468 aa25.46■■□□□ 1.67
C9orf3-208ENST00000451893 TKFCQ3LXA3 575 aa25.46■■□□□ 1.67
C9orf3-208ENST00000451893 OSBPL3Q9H4L5 887 aa25.46■■□□□ 1.67
C9orf3-208ENST00000451893 POTEB2H3BUK9 544 aa25.45■■□□□ 1.66
C9orf3-208ENST00000451893 PGK1P00558 417 aa25.45■■□□□ 1.66
C9orf3-208ENST00000451893 AKNAD1Q5T1N1 836 aa25.45■■□□□ 1.66
C9orf3-208ENST00000451893 SLC39A5Q6ZMH5 540 aa25.45■■□□□ 1.66
C9orf3-208ENST00000451893 AGBL1Q96MI9 1066 aa25.45■■□□□ 1.66
C9orf3-208ENST00000451893 TRERF1Q96PN7 1200 aa25.45■■□□□ 1.66
C9orf3-208ENST00000451893 SPC25Q9HBM1 224 aa25.45■■□□□ 1.66
C9orf3-208ENST00000451893 MCM3APO60318 1980 aa25.44■■□□□ 1.66
C9orf3-208ENST00000451893 PLA2G6O60733 806 aa25.44■■□□□ 1.66
C9orf3-208ENST00000451893 PDE4AP27815 886 aa25.44■■□□□ 1.66
C9orf3-208ENST00000451893 ZNF467Q7Z7K2 595 aaPredicted RBP25.44■■□□□ 1.66
C9orf3-208ENST00000451893 TDHQ8IZJ6 230 aa25.44■■□□□ 1.66
C9orf3-208ENST00000451893 ESR2Q92731 530 aa25.44■■□□□ 1.66
C9orf3-208ENST00000451893 CCPG1Q9ULG6 757 aa25.44■■□□□ 1.66
C9orf3-208ENST00000451893 PRR12Q9ULL5 1215 aa25.44■■□□□ 1.66
C9orf3-208ENST00000451893 ZNF865P0CJ78 1059 aaPredicted RBP25.43■■□□□ 1.66
C9orf3-208ENST00000451893 SNAP25P60880 206 aa25.43■■□□□ 1.66
C9orf3-208ENST00000451893 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.43■■□□□ 1.66
C9orf3-208ENST00000451893 FRMPD2Q68DX3 1309 aaPredicted RBP25.42■■□□□ 1.66
C9orf3-208ENST00000451893 DNAJC25-GNG10A0A024R161 153 aa25.42■■□□□ 1.66
C9orf3-208ENST00000451893 FGRP09769 529 aa25.42■■□□□ 1.66
C9orf3-208ENST00000451893 ACVR2BQ13705 512 aa25.42■■□□□ 1.66
C9orf3-208ENST00000451893 TRIM60Q495X7 471 aa25.42■■□□□ 1.66
C9orf3-208ENST00000451893 MAMDC4Q6UXC1 1216 aa25.42■■□□□ 1.66
C9orf3-208ENST00000451893 NOL8Q76FK4 1167 aaKnown RBP25.42■■□□□ 1.66
C9orf3-208ENST00000451893 ARMCX2Q7L311 632 aa25.42■■□□□ 1.66
C9orf3-208ENST00000451893 SKAP1Q86WV1 359 aa25.42■■□□□ 1.66
C9orf3-208ENST00000451893 LENG1Q96BZ8 264 aaPredicted RBP25.42■■□□□ 1.66
C9orf3-208ENST00000451893 TMEM47Q9BQJ4 181 aa25.42■■□□□ 1.66
C9orf3-208ENST00000451893 ABHD16BQ9H3Z7 469 aa25.42■■□□□ 1.66
C9orf3-208ENST00000451893 GPCPD1Q9NPB8 672 aa25.42■■□□□ 1.66
C9orf3-208ENST00000451893 TACC3Q9Y6A5 838 aa25.42■■□□□ 1.66
C9orf3-208ENST00000451893 NSMFQ6X4W1 530 aa25.41■■□□□ 1.66
C9orf3-208ENST00000451893 RASGRP2Q7LDG7 609 aa25.41■■□□□ 1.66
C9orf3-208ENST00000451893 TCP11L1Q9NUJ3 509 aa25.41■■□□□ 1.66
C9orf3-208ENST00000451893 SNAI1O95863 264 aaPredicted RBP25.4■■□□□ 1.66
C9orf3-208ENST00000451893 SLC16A2P36021 539 aa25.4■■□□□ 1.66
C9orf3-208ENST00000451893 IMMTQ16891 758 aaKnown RBP25.4■■□□□ 1.66
C9orf3-208ENST00000451893 SYDE2Q5VT97 1194 aa25.4■■□□□ 1.66
C9orf3-208ENST00000451893 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.4■■□□□ 1.66
C9orf3-208ENST00000451893 IQCA1Q86XH1 822 aa25.4■■□□□ 1.66
C9orf3-208ENST00000451893 NUP133Q8WUM0 1156 aa25.4■■□□□ 1.66
C9orf3-208ENST00000451893 A1CFQ9NQ94 594 aaKnown RBP25.4■■□□□ 1.66
C9orf3-208ENST00000451893 CTNNA3Q9UI47 895 aa25.4■■□□□ 1.66
C9orf3-208ENST00000451893 PHF24Q9UPV7 400 aa25.4■■□□□ 1.66
C9orf3-208ENST00000451893 LAMA4Q16363 1823 aa25.4■■□□□ 1.66
C9orf3-208ENST00000451893 ASB14A6NK59 587 aa25.39■■□□□ 1.66
C9orf3-208ENST00000451893 C6orf222P0C671 652 aaPredicted RBP25.39■■□□□ 1.66
C9orf3-208ENST00000451893 CCDC178Q5BJE1 867 aa25.39■■□□□ 1.66
C9orf3-208ENST00000451893 TBC1D10CQ8IV04 446 aa25.39■■□□□ 1.66
C9orf3-208ENST00000451893 CCDC144CPQ8IYA2 1237 aa25.39■■□□□ 1.66
C9orf3-208ENST00000451893 VTI1AQ96AJ9 217 aa25.39■■□□□ 1.66
C9orf3-208ENST00000451893 TTC14Q96N46 770 aa25.39■■□□□ 1.66
C9orf3-208ENST00000451893 TSHZ2Q9NRE2 1034 aa25.39■■□□□ 1.66
C9orf3-208ENST00000451893 ZNF536O15090 1300 aa25.38■■□□□ 1.65
C9orf3-208ENST00000451893 SYNRGQ9UMZ2 1314 aa25.38■■□□□ 1.65
C9orf3-208ENST00000451893 CNTN2Q02246 1040 aa25.38■■□□□ 1.65
C9orf3-208ENST00000451893 TTBK2Q6IQ55 1244 aa25.38■■□□□ 1.65
C9orf3-208ENST00000451893 LRCH3Q96II8 777 aa25.38■■□□□ 1.65
C9orf3-208ENST00000451893 ZKSCAN3Q9BRR0 538 aa25.38■■□□□ 1.65
C9orf3-208ENST00000451893 STARD7Q9NQZ5 370 aa25.38■■□□□ 1.65
C9orf3-208ENST00000451893 A0A1W2PQ45 241 aaPredicted RBP25.37■■□□□ 1.65
C9orf3-208ENST00000451893 A0A1W2PQY0 241 aa25.37■■□□□ 1.65
C9orf3-208ENST00000451893 DUSP11O75319 330 aaKnown RBP25.37■■□□□ 1.65
C9orf3-208ENST00000451893 ICAM1P05362 532 aa25.37■■□□□ 1.65
C9orf3-208ENST00000451893 CCDC144BQ3MJ40 725 aa25.37■■□□□ 1.65
C9orf3-208ENST00000451893 TSEN34Q9BSV6 310 aaKnown RBP25.37■■□□□ 1.65
C9orf3-208ENST00000451893 BACH2Q9BYV9 841 aa25.37■■□□□ 1.65
C9orf3-208ENST00000451893 PNMA2Q9UL42 364 aa25.37■■□□□ 1.65
C9orf3-208ENST00000451893 NEDD4P46934 1319 aa25.37■■□□□ 1.65
C9orf3-208ENST00000451893 SOX1O00570 391 aaPredicted RBP25.36■■□□□ 1.65
C9orf3-208ENST00000451893 PQBP1O60828 265 aaKnown RBP25.36■■□□□ 1.65
C9orf3-208ENST00000451893 NOVP48745 357 aa25.36■■□□□ 1.65
C9orf3-208ENST00000451893 NT5C2P49902 561 aa25.36■■□□□ 1.65
C9orf3-208ENST00000451893 PCSK9Q8NBP7 692 aaKnown RBP25.36■■□□□ 1.65
C9orf3-208ENST00000451893 DSCC1Q9BVC3 393 aa25.36■■□□□ 1.65
C9orf3-208ENST00000451893 RANBP17Q9H2T7 1088 aaKnown RBP25.36■■□□□ 1.65
C9orf3-208ENST00000451893 KAT14Q9H8E8 782 aa25.36■■□□□ 1.65
C9orf3-208ENST00000451893 PTPDC1A2A3K4 754 aa25.35■■□□□ 1.65
C9orf3-208ENST00000451893 MOXD2PA6NHM9 499 aa25.35■■□□□ 1.65
C9orf3-208ENST00000451893 KDM4AO75164 1064 aa25.35■■□□□ 1.65
C9orf3-208ENST00000451893 PDHBP11177 359 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms