RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 PPP4R3BQ5MIZ7 849 aa32.13■■■□□ 2.73
USP42-204ENST00000451154 BADQ92934 168 aa32.13■■■□□ 2.73
USP42-204ENST00000451154 LNPKQ9C0E8 428 aa32.13■■■□□ 2.73
USP42-204ENST00000451154 CDKN2AIPQ9NXV6 580 aaPredicted RBP32.13■■■□□ 2.73
USP42-204ENST00000451154 MTMR7Q9Y216 660 aa32.13■■■□□ 2.73
USP42-204ENST00000451154 LTBP2Q14767 1821 aa32.12■■■□□ 2.73
USP42-204ENST00000451154 A0A1W2PQ45 241 aaPredicted RBP32.12■■■□□ 2.73
USP42-204ENST00000451154 A0A1W2PQY0 241 aa32.12■■■□□ 2.73
USP42-204ENST00000451154 SNAP25P60880 206 aa32.12■■■□□ 2.73
USP42-204ENST00000451154 CNTN2Q02246 1040 aa32.12■■■□□ 2.73
USP42-204ENST00000451154 MCMDC2Q4G0Z9 681 aa32.12■■■□□ 2.73
USP42-204ENST00000451154 RCSD1Q6JBY9 416 aa32.12■■■□□ 2.73
USP42-204ENST00000451154 A0A0C4DFX4 3053 aa32.12■■■□□ 2.73
USP42-204ENST00000451154 ZNF536O15090 1300 aa32.11■■■□□ 2.73
USP42-204ENST00000451154 SYNRGQ9UMZ2 1314 aa32.11■■■□□ 2.73
USP42-204ENST00000451154 A0A0D9SFI3 127 aa32.11■■■□□ 2.73
USP42-204ENST00000451154 FGAP02671 866 aa32.11■■■□□ 2.73
USP42-204ENST00000451154 RASGRP2Q7LDG7 609 aa32.11■■■□□ 2.73
USP42-204ENST00000451154 MTMR10Q9NXD2 777 aa32.11■■■□□ 2.73
USP42-204ENST00000451154 TSEN34Q9BSV6 310 aaKnown RBP32.1■■■□□ 2.73
USP42-204ENST00000451154 ACAD9Q9H845 621 aa32.1■■■□□ 2.73
USP42-204ENST00000451154 ORC4O43929 436 aa32.09■■■□□ 2.73
USP42-204ENST00000451154 PLA2G6O60733 806 aa32.09■■■□□ 2.73
USP42-204ENST00000451154 DUSP11O75319 330 aaKnown RBP32.09■■■□□ 2.73
USP42-204ENST00000451154 ACLYP53396 1101 aa32.09■■■□□ 2.73
USP42-204ENST00000451154 IRX5P78411 483 aaPredicted RBP32.09■■■□□ 2.73
USP42-204ENST00000451154 SHHQ15465 462 aa32.09■■■□□ 2.73
USP42-204ENST00000451154 KCNA10Q16322 511 aa32.09■■■□□ 2.73
USP42-204ENST00000451154 B4GALNT3Q6L9W6 998 aa32.09■■■□□ 2.73
USP42-204ENST00000451154 CCDC174Q6PII3 467 aa32.09■■■□□ 2.73
USP42-204ENST00000451154 ARMCX2Q7L311 632 aa32.09■■■□□ 2.73
USP42-204ENST00000451154 KLHDC9Q8NEP7 349 aa32.09■■■□□ 2.73
USP42-204ENST00000451154 ABHD16BQ9H3Z7 469 aa32.09■■■□□ 2.73
USP42-204ENST00000451154 TOMM22Q9NS69 142 aa32.09■■■□□ 2.73
USP42-204ENST00000451154 RNF146Q9NTX7 359 aa32.09■■■□□ 2.73
USP42-204ENST00000451154 TRIM6-TRIM34B2RNG4 842 aa32.08■■■□□ 2.73
USP42-204ENST00000451154 POTEB2H3BUK9 544 aa32.08■■■□□ 2.73
USP42-204ENST00000451154 PQBP1O60828 265 aaKnown RBP32.08■■■□□ 2.73
USP42-204ENST00000451154 FGRP09769 529 aa32.08■■■□□ 2.73
USP42-204ENST00000451154 NMIQ13287 307 aaPredicted RBP32.08■■■□□ 2.73
USP42-204ENST00000451154 CCDC144BQ3MJ40 725 aa32.08■■■□□ 2.73
USP42-204ENST00000451154 RRP12Q5JTH9 1297 aaKnown RBP32.08■■■□□ 2.73
USP42-204ENST00000451154 CCDC144CPQ8IYA2 1237 aa32.08■■■□□ 2.73
USP42-204ENST00000451154 SLC17A8Q8NDX2 589 aa32.08■■■□□ 2.73
USP42-204ENST00000451154 TRERF1Q96PN7 1200 aa32.08■■■□□ 2.73
USP42-204ENST00000451154 PRR12Q9ULL5 1215 aa32.08■■■□□ 2.73
USP42-204ENST00000451154 MYADML2A6NDP7 307 aa32.07■■■□□ 2.72
USP42-204ENST00000451154 ADCY6O43306 1168 aa32.07■■■□□ 2.72
USP42-204ENST00000451154 HSPD1P10809 573 aaKnown RBP32.07■■■□□ 2.72
USP42-204ENST00000451154 ALAS1P13196 640 aa32.07■■■□□ 2.72
USP42-204ENST00000451154 NOVP48745 357 aa32.07■■■□□ 2.72
USP42-204ENST00000451154 C9orf50Q5SZB4 431 aa32.07■■■□□ 2.72
USP42-204ENST00000451154 CCSAPQ6IQ19 270 aaPredicted RBP32.07■■■□□ 2.72
USP42-204ENST00000451154 ZNF589Q86UQ0 364 aaPredicted RBP32.07■■■□□ 2.72
USP42-204ENST00000451154 RILPL2Q969X0 211 aa32.07■■■□□ 2.72
USP42-204ENST00000451154 A1CFQ9NQ94 594 aaKnown RBP32.07■■■□□ 2.72
USP42-204ENST00000451154 CLTBP09497 229 aa32.06■■■□□ 2.72
USP42-204ENST00000451154 ITGB8P26012 769 aa32.06■■■□□ 2.72
USP42-204ENST00000451154 FAM133AQ8N9E0 248 aa32.06■■■□□ 2.72
USP42-204ENST00000451154 RWDD1Q9H446 243 aaPredicted RBP32.06■■■□□ 2.72
USP42-204ENST00000451154 STARD7Q9NQZ5 370 aa32.06■■■□□ 2.72
USP42-204ENST00000451154 TKFCQ3LXA3 575 aa32.05■■■□□ 2.72
USP42-204ENST00000451154 NUP133Q8WUM0 1156 aa32.05■■■□□ 2.72
USP42-204ENST00000451154 SOWAHBA6NEL2 793 aa32.04■■■□□ 2.72
USP42-204ENST00000451154 MOXD2PA6NHM9 499 aa32.04■■■□□ 2.72
USP42-204ENST00000451154 C6orf222P0C671 652 aaPredicted RBP32.04■■■□□ 2.72
USP42-204ENST00000451154 HAND2P61296 217 aa32.04■■■□□ 2.72
USP42-204ENST00000451154 CCDC96Q2M329 555 aa32.04■■■□□ 2.72
USP42-204ENST00000451154 TTBK2Q6IQ55 1244 aa32.04■■■□□ 2.72
USP42-204ENST00000451154 TICAM2Q86XR7 235 aa32.04■■■□□ 2.72
USP42-204ENST00000451154 SMC5Q8IY18 1101 aa32.04■■■□□ 2.72
USP42-204ENST00000451154 KATNBL1Q9H079 304 aa32.04■■■□□ 2.72
USP42-204ENST00000451154 AAMPQ13685 434 aa32.03■■■□□ 2.72
USP42-204ENST00000451154 MUM1L1Q5H9M0 696 aa32.03■■■□□ 2.72
USP42-204ENST00000451154 DCAF4Q8WV16 495 aa32.03■■■□□ 2.72
USP42-204ENST00000451154 TMEM39AQ9NV64 488 aa32.03■■■□□ 2.72
USP42-204ENST00000451154 IGHDP01880 384 aa32.02■■■□□ 2.72
USP42-204ENST00000451154 SLC16A2P36021 539 aa32.02■■■□□ 2.72
USP42-204ENST00000451154 TMEM47Q9BQJ4 181 aa32.02■■■□□ 2.72
USP42-204ENST00000451154 SPC25Q9HBM1 224 aa32.02■■■□□ 2.72
USP42-204ENST00000451154 STXBP5LQ9Y2K9 1186 aa32.02■■■□□ 2.72
USP42-204ENST00000451154 DDX49Q9Y6V7 483 aaKnown RBP32.02■■■□□ 2.72
USP42-204ENST00000451154 KIAA0355O15063 1070 aa32.01■■■□□ 2.71
USP42-204ENST00000451154 GJA9P57773 515 aa32.01■■■□□ 2.71
USP42-204ENST00000451154 FAAP100Q0VG06 881 aa32.01■■■□□ 2.71
USP42-204ENST00000451154 GNASQ5JWF2 1037 aa32.01■■■□□ 2.71
USP42-204ENST00000451154 ANKRD33Q7Z3H0 272 aa32.01■■■□□ 2.71
USP42-204ENST00000451154 VTI1AQ96AJ9 217 aa32.01■■■□□ 2.71
USP42-204ENST00000451154 TOX2Q96NM4 488 aa32.01■■■□□ 2.71
USP42-204ENST00000451154 UPF3AQ9H1J1 476 aaKnown RBP32.01■■■□□ 2.71
USP42-204ENST00000451154 CCPG1Q9ULG6 757 aa32.01■■■□□ 2.71
USP42-204ENST00000451154 CCDC171Q6TFL3 1326 aa32■■■□□ 2.71
USP42-204ENST00000451154 ASGR1P07306 291 aa32■■■□□ 2.71
USP42-204ENST00000451154 TOP1P11387 765 aaKnown RBP32■■■□□ 2.71
USP42-204ENST00000451154 RAG1P15918 1043 aa32■■■□□ 2.71
USP42-204ENST00000451154 CST5P28325 142 aaPredicted RBP32■■■□□ 2.71
USP42-204ENST00000451154 FAM109BQ6ICB4 259 aaPredicted RBP32■■■□□ 2.71
USP42-204ENST00000451154 PLEKHM2Q8IWE5 1019 aa32■■■□□ 2.71
USP42-204ENST00000451154 PCSK9Q8NBP7 692 aaKnown RBP32■■■□□ 2.71
USP42-204ENST00000451154 FAM161BQ96MY7 647 aa32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms