RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 TRIOBPQ9H2D6 2365 aa18.87■□□□□ 0.61
SGCE-208ENST00000450385 ABHD16BQ9H3Z7 469 aa18.87■□□□□ 0.61
SGCE-208ENST00000450385 CNNM2Q9H8M5 875 aa18.87■□□□□ 0.61
SGCE-208ENST00000450385 TACC3Q9Y6A5 838 aa18.87■□□□□ 0.61
SGCE-208ENST00000450385 NMT2O60551 498 aa18.86■□□□□ 0.61
SGCE-208ENST00000450385 GPATCH4Q5T3I0 446 aaKnown RBP18.86■□□□□ 0.61
SGCE-208ENST00000450385 TTC22Q5TAA0 569 aa18.86■□□□□ 0.61
SGCE-208ENST00000450385 RNF180Q86T96 592 aa18.86■□□□□ 0.61
SGCE-208ENST00000450385 ANKS1AQ92625 1134 aa18.86■□□□□ 0.61
SGCE-208ENST00000450385 TSEN34Q9BSV6 310 aaKnown RBP18.86■□□□□ 0.61
SGCE-208ENST00000450385 KRT23Q9C075 422 aa18.86■□□□□ 0.61
SGCE-208ENST00000450385 RBM27Q9P2N5 1060 aaKnown RBP18.86■□□□□ 0.61
SGCE-208ENST00000450385 FAM184BQ9ULE4 1060 aa18.86■□□□□ 0.61
SGCE-208ENST00000450385 PRR12Q9ULL5 1215 aa18.86■□□□□ 0.61
SGCE-208ENST00000450385 ISY1Q9ULR0 285 aaKnown RBP18.86■□□□□ 0.61
SGCE-208ENST00000450385 ZNF536O15090 1300 aa18.85■□□□□ 0.61
SGCE-208ENST00000450385 ZNF865P0CJ78 1059 aaPredicted RBP18.85■□□□□ 0.61
SGCE-208ENST00000450385 HAND2P61296 217 aa18.85■□□□□ 0.61
SGCE-208ENST00000450385 KCTD1Q719H9 257 aa18.85■□□□□ 0.61
SGCE-208ENST00000450385 C7orf61Q8IZ16 206 aa18.85■□□□□ 0.61
SGCE-208ENST00000450385 GDF15Q99988 308 aa18.85■□□□□ 0.61
SGCE-208ENST00000450385 RANBP17Q9H2T7 1088 aaKnown RBP18.85■□□□□ 0.61
SGCE-208ENST00000450385 ASB14A6NK59 587 aa18.84■□□□□ 0.61
SGCE-208ENST00000450385 ICAM1P05362 532 aa18.84■□□□□ 0.61
SGCE-208ENST00000450385 SNHG28P0DPA3 235 aa18.84■□□□□ 0.61
SGCE-208ENST00000450385 FXR1P51114 621 aaKnown RBP eCLIP18.84■□□□□ 0.61
SGCE-208ENST00000450385 LRRC41Q15345 812 aa18.84■□□□□ 0.61
SGCE-208ENST00000450385 PRAMEF19Q5SWL8 479 aa18.84■□□□□ 0.61
SGCE-208ENST00000450385 TRERF1Q96PN7 1200 aa18.84■□□□□ 0.61
SGCE-208ENST00000450385 XPNPEP3Q9NQH7 507 aa18.84■□□□□ 0.61
SGCE-208ENST00000450385 POTEB2H3BUK9 544 aa18.83■□□□□ 0.6
SGCE-208ENST00000450385 DUSP11O75319 330 aaKnown RBP18.83■□□□□ 0.6
SGCE-208ENST00000450385 SNAI1O95863 264 aaPredicted RBP18.83■□□□□ 0.6
SGCE-208ENST00000450385 PDHBP11177 359 aa18.83■□□□□ 0.6
SGCE-208ENST00000450385 LRRC26Q2I0M4 334 aa18.83■□□□□ 0.6
SGCE-208ENST00000450385 CCDC96Q2M329 555 aa18.83■□□□□ 0.6
SGCE-208ENST00000450385 SYDE2Q5VT97 1194 aa18.83■□□□□ 0.6
SGCE-208ENST00000450385 FAM133AQ8N9E0 248 aa18.83■□□□□ 0.6
SGCE-208ENST00000450385 RNF146Q9NTX7 359 aa18.83■□□□□ 0.6
SGCE-208ENST00000450385 PDE4AP27815 886 aa18.82■□□□□ 0.6
SGCE-208ENST00000450385 SLC4A3P48751 1232 aa18.82■□□□□ 0.6
SGCE-208ENST00000450385 ZNF543Q08ER8 600 aa18.82■□□□□ 0.6
SGCE-208ENST00000450385 ACVR2BQ13705 512 aa18.82■□□□□ 0.6
SGCE-208ENST00000450385 SNX17Q15036 470 aa18.82■□□□□ 0.6
SGCE-208ENST00000450385 GJC2Q5T442 439 aaPredicted RBP18.82■□□□□ 0.6
SGCE-208ENST00000450385 SLC39A5Q6ZMH5 540 aa18.82■□□□□ 0.6
SGCE-208ENST00000450385 TBC1D10CQ8IV04 446 aa18.82■□□□□ 0.6
SGCE-208ENST00000450385 PIAS4Q8N2W9 510 aaPredicted RBP18.82■□□□□ 0.6
SGCE-208ENST00000450385 AGBL1Q96MI9 1066 aa18.82■□□□□ 0.6
SGCE-208ENST00000450385 SPC25Q9HBM1 224 aa18.82■□□□□ 0.6
SGCE-208ENST00000450385 PHF24Q9UPV7 400 aa18.82■□□□□ 0.6
SGCE-208ENST00000450385 MCM3APO60318 1980 aa18.82■□□□□ 0.6
SGCE-208ENST00000450385 MOXD2PA6NHM9 499 aa18.81■□□□□ 0.6
SGCE-208ENST00000450385 ALAS1P13196 640 aa18.81■□□□□ 0.6
SGCE-208ENST00000450385 NUP133Q8WUM0 1156 aa18.81■□□□□ 0.6
SGCE-208ENST00000450385 A1CFQ9NQ94 594 aaKnown RBP18.81■□□□□ 0.6
SGCE-208ENST00000450385 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.81■□□□□ 0.6
SGCE-208ENST00000450385 ZSWIM5Q9P217 1185 aa18.81■□□□□ 0.6
SGCE-208ENST00000450385 ADD3Q9UEY8 706 aaKnown RBP18.81■□□□□ 0.6
SGCE-208ENST00000450385 PRKAG2Q9UGJ0 569 aa18.81■□□□□ 0.6
SGCE-208ENST00000450385 CCPG1Q9ULG6 757 aa18.81■□□□□ 0.6
SGCE-208ENST00000450385 U3KPZ7 1027 aaPredicted RBP18.81■□□□□ 0.6
SGCE-208ENST00000450385 WDR19Q8NEZ3 1342 aa18.8■□□□□ 0.6
SGCE-208ENST00000450385 GSPT1P15170 499 aaKnown RBP18.8■□□□□ 0.6
SGCE-208ENST00000450385 CST5P28325 142 aaPredicted RBP18.8■□□□□ 0.6
SGCE-208ENST00000450385 NKX3-2P78367 333 aa18.8■□□□□ 0.6
SGCE-208ENST00000450385 GPR153Q6NV75 609 aa18.8■□□□□ 0.6
SGCE-208ENST00000450385 PCSK9Q8NBP7 692 aaKnown RBP18.8■□□□□ 0.6
SGCE-208ENST00000450385 RGS22Q8NE09 1264 aa18.8■□□□□ 0.6
SGCE-208ENST00000450385 ZSCAN10Q96SZ4 725 aaPredicted RBP18.8■□□□□ 0.6
SGCE-208ENST00000450385 HOMER2Q9NSB8 354 aa18.8■□□□□ 0.6
SGCE-208ENST00000450385 CYP39A1Q9NYL5 469 aa18.8■□□□□ 0.6
SGCE-208ENST00000450385 KDM4AO75164 1064 aa18.79■□□□□ 0.6
SGCE-208ENST00000450385 TAL1P17542 331 aaPredicted RBP18.79■□□□□ 0.6
SGCE-208ENST00000450385 CHMLP26374 656 aa18.79■□□□□ 0.6
SGCE-208ENST00000450385 TRDNQ13061 729 aa18.79■□□□□ 0.6
SGCE-208ENST00000450385 ASPRV1Q53RT3 343 aa18.79■□□□□ 0.6
SGCE-208ENST00000450385 ARMCX2Q7L311 632 aa18.79■□□□□ 0.6
SGCE-208ENST00000450385 PNMA1Q8ND90 353 aa18.79■□□□□ 0.6
SGCE-208ENST00000450385 KLHDC9Q8NEP7 349 aa18.79■□□□□ 0.6
SGCE-208ENST00000450385 MPHOSPH6Q99547 160 aaKnown RBP18.79■□□□□ 0.6
SGCE-208ENST00000450385 SEZ6LQ9BYH1 1024 aa18.79■□□□□ 0.6
SGCE-208ENST00000450385 KAT14Q9H8E8 782 aa18.79■□□□□ 0.6
SGCE-208ENST00000450385 SZT2Q5T011 3432 aa18.79■□□□□ 0.6
SGCE-208ENST00000450385 LAMA3Q16787 3333 aa18.79■□□□□ 0.6
SGCE-208ENST00000450385 NEDD4P46934 1319 aa18.78■□□□□ 0.6
SGCE-208ENST00000450385 B4DLN1 442 aa18.78■□□□□ 0.6
SGCE-208ENST00000450385 ADAMTS4O75173 837 aa18.78■□□□□ 0.6
SGCE-208ENST00000450385 ADCYAP1R1P41586 468 aa18.78■□□□□ 0.6
SGCE-208ENST00000450385 MRPL12P52815 198 aaKnown RBP18.78■□□□□ 0.6
SGCE-208ENST00000450385 RTP1P59025 263 aa18.78■□□□□ 0.6
SGCE-208ENST00000450385 IQSEC1Q6DN90 963 aa18.78■□□□□ 0.6
SGCE-208ENST00000450385 CCDC174Q6PII3 467 aa18.78■□□□□ 0.6
SGCE-208ENST00000450385 CCDC144CPQ8IYA2 1237 aa18.78■□□□□ 0.6
SGCE-208ENST00000450385 MORC4Q8TE76 937 aa18.78■□□□□ 0.6
SGCE-208ENST00000450385 FGD4Q96M96 766 aa18.78■□□□□ 0.6
SGCE-208ENST00000450385 LBHD1Q9BQE6 289 aaPredicted RBP18.78■□□□□ 0.6
SGCE-208ENST00000450385 UBAC1Q9BSL1 405 aa18.78■□□□□ 0.6
SGCE-208ENST00000450385 ZMYND8Q9ULU4 1186 aaPredicted RBP18.78■□□□□ 0.6
SGCE-208ENST00000450385 Q9Y3F1 56 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms