RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 MYOGP15173 224 aa16.46■□□□□ 0.23
CPSF7-207ENST00000449811 CCL23P55773 120 aa16.46■□□□□ 0.23
CPSF7-207ENST00000449811 SLFNL1Q499Z3 407 aa16.46■□□□□ 0.23
CPSF7-207ENST00000449811 ITPRIPQ8IWB1 547 aa16.46■□□□□ 0.23
CPSF7-207ENST00000449811 FTSJ3Q8IY81 847 aaKnown RBP16.46■□□□□ 0.23
CPSF7-207ENST00000449811 CPXCR1Q8N123 301 aa16.46■□□□□ 0.23
CPSF7-207ENST00000449811 ANKRD35Q8N283 1001 aa16.46■□□□□ 0.23
CPSF7-207ENST00000449811 PRPF38AQ8NAV1 312 aaKnown RBP16.46■□□□□ 0.23
CPSF7-207ENST00000449811 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.46■□□□□ 0.23
CPSF7-207ENST00000449811 DDRGK1Q96HY6 314 aa16.46■□□□□ 0.23
CPSF7-207ENST00000449811 FGD4Q96M96 766 aa16.46■□□□□ 0.23
CPSF7-207ENST00000449811 ARIH1Q9Y4X5 557 aaPredicted RBP16.46■□□□□ 0.23
CPSF7-207ENST00000449811 CTDP1Q9Y5B0 961 aaPredicted RBP16.46■□□□□ 0.23
CPSF7-207ENST00000449811 PCDHA11Q9Y5I1 949 aa16.46■□□□□ 0.23
CPSF7-207ENST00000449811 SLC4A7Q9Y6M7 1214 aa16.46■□□□□ 0.23
CPSF7-207ENST00000449811 GBF1Q92538 1859 aa16.46■□□□□ 0.22
CPSF7-207ENST00000449811 ERC2O15083 957 aa16.45■□□□□ 0.22
CPSF7-207ENST00000449811 ZBED4O75132 1171 aa16.45■□□□□ 0.22
CPSF7-207ENST00000449811 ADD2P35612 726 aa16.45■□□□□ 0.22
CPSF7-207ENST00000449811 NKX3-2P78367 333 aa16.45■□□□□ 0.22
CPSF7-207ENST00000449811 BEX3Q00994 111 aa16.45■□□□□ 0.22
CPSF7-207ENST00000449811 CEP85Q6P2H3 762 aa16.45■□□□□ 0.22
CPSF7-207ENST00000449811 CXCL17Q6UXB2 119 aa16.45■□□□□ 0.22
CPSF7-207ENST00000449811 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.45■□□□□ 0.22
CPSF7-207ENST00000449811 SLC43A3Q8NBI5 491 aa16.45■□□□□ 0.22
CPSF7-207ENST00000449811 LRFN3Q9BTN0 628 aa16.45■□□□□ 0.22
CPSF7-207ENST00000449811 BAZ2AQ9UIF9 1905 aaKnown RBP16.45■□□□□ 0.22
CPSF7-207ENST00000449811 ZBBXA8MT70 800 aa16.44■□□□□ 0.22
CPSF7-207ENST00000449811 CABYRO75952 493 aa16.44■□□□□ 0.22
CPSF7-207ENST00000449811 ITGA7Q13683 1181 aa16.44■□□□□ 0.22
CPSF7-207ENST00000449811 NOL8Q76FK4 1167 aaKnown RBP16.44■□□□□ 0.22
CPSF7-207ENST00000449811 CCDC144CPQ8IYA2 1237 aa16.44■□□□□ 0.22
CPSF7-207ENST00000449811 RPUSD2Q8IZ73 545 aaKnown RBP16.44■□□□□ 0.22
CPSF7-207ENST00000449811 RHPN1Q8TCX5 695 aa16.44■□□□□ 0.22
CPSF7-207ENST00000449811 NOC4LQ9BVI4 516 aaKnown RBP16.44■□□□□ 0.22
CPSF7-207ENST00000449811 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.44■□□□□ 0.22
CPSF7-207ENST00000449811 KATNBL1Q9H079 304 aa16.44■□□□□ 0.22
CPSF7-207ENST00000449811 EPHX3Q9H6B9 360 aa16.44■□□□□ 0.22
CPSF7-207ENST00000449811 RAVER2Q9HCJ3 691 aaKnown RBP16.44■□□□□ 0.22
CPSF7-207ENST00000449811 FBXO40Q9UH90 709 aa16.44■□□□□ 0.22
CPSF7-207ENST00000449811 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.43■□□□□ 0.22
CPSF7-207ENST00000449811 F5H6K3 240 aa16.43■□□□□ 0.22
CPSF7-207ENST00000449811 GTPBP6O43824 516 aaPredicted RBP16.43■□□□□ 0.22
CPSF7-207ENST00000449811 NDUFB10O96000 172 aa16.43■□□□□ 0.22
CPSF7-207ENST00000449811 TNFAIP2Q03169 654 aa16.43■□□□□ 0.22
CPSF7-207ENST00000449811 KLRC3Q07444 240 aa16.43■□□□□ 0.22
CPSF7-207ENST00000449811 HSP90AB4PQ58FF6 505 aa16.43■□□□□ 0.22
CPSF7-207ENST00000449811 CTR9Q6PD62 1173 aa16.43■□□□□ 0.22
CPSF7-207ENST00000449811 TLK2Q86UE8 772 aa16.43■□□□□ 0.22
CPSF7-207ENST00000449811 CLASRPQ8N2M8 674 aaKnown RBP16.43■□□□□ 0.22
CPSF7-207ENST00000449811 CHST13Q8NET6 341 aa16.43■□□□□ 0.22
CPSF7-207ENST00000449811 WNT8AQ9H1J5 351 aa16.43■□□□□ 0.22
CPSF7-207ENST00000449811 SLC4A4Q9Y6R1 1079 aa16.43■□□□□ 0.22
CPSF7-207ENST00000449811 ASTN1O14525 1302 aa16.43■□□□□ 0.22
CPSF7-207ENST00000449811 B4GALT4O60513 344 aa16.42■□□□□ 0.22
CPSF7-207ENST00000449811 IFIT2P09913 472 aaKnown RBP16.42■□□□□ 0.22
CPSF7-207ENST00000449811 ATP2A2P16615 1042 aaKnown RBP16.42■□□□□ 0.22
CPSF7-207ENST00000449811 FSCN1Q16658 493 aaKnown RBP16.42■□□□□ 0.22
CPSF7-207ENST00000449811 KIFC2Q96AC6 838 aa16.42■□□□□ 0.22
CPSF7-207ENST00000449811 SEZ6LQ9BYH1 1024 aa16.42■□□□□ 0.22
CPSF7-207ENST00000449811 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.42■□□□□ 0.224e-7■■■□□ 16.7
CPSF7-207ENST00000449811 TRPV6Q9H1D0 765 aa16.42■□□□□ 0.22
CPSF7-207ENST00000449811 SLC38A10Q9HBR0 1119 aa16.42■□□□□ 0.22
CPSF7-207ENST00000449811 PAG1Q9NWQ8 432 aa16.42■□□□□ 0.22
CPSF7-207ENST00000449811 NYAP2Q9P242 653 aa16.42■□□□□ 0.22
CPSF7-207ENST00000449811 GNEQ9Y223 722 aaKnown RBP16.42■□□□□ 0.22
CPSF7-207ENST00000449811 MTCH2Q9Y6C9 303 aa16.42■□□□□ 0.22
CPSF7-207ENST00000449811 MCM3APO60318 1980 aa16.42■□□□□ 0.22
CPSF7-207ENST00000449811 GRIN2DO15399 1336 aa16.42■□□□□ 0.22
CPSF7-207ENST00000449811 ZBED9Q6R2W3 1325 aa16.42■□□□□ 0.22
CPSF7-207ENST00000449811 RFXAPO00287 272 aa16.41■□□□□ 0.22
CPSF7-207ENST00000449811 ZEB2O60315 1214 aa16.41■□□□□ 0.22
CPSF7-207ENST00000449811 POU3F3P20264 500 aaPredicted RBP16.41■□□□□ 0.22
CPSF7-207ENST00000449811 OAZ1P54368 228 aa16.41■□□□□ 0.22
CPSF7-207ENST00000449811 TMEM31Q5JXX7 168 aa16.41■□□□□ 0.22
CPSF7-207ENST00000449811 SCLYQ96I15 445 aa16.41■□□□□ 0.22
CPSF7-207ENST00000449811 AP5M1Q9H0R1 490 aa16.41■□□□□ 0.22
CPSF7-207ENST00000449811 HOMER2Q9NSB8 354 aa16.41■□□□□ 0.22
CPSF7-207ENST00000449811 ARPP21Q9UBL0 812 aaPredicted RBP16.41■□□□□ 0.22
CPSF7-207ENST00000449811 CA3P07451 260 aa16.4■□□□□ 0.22
CPSF7-207ENST00000449811 RLBP1P12271 317 aa16.4■□□□□ 0.22
CPSF7-207ENST00000449811 CNTN2Q02246 1040 aa16.4■□□□□ 0.22
CPSF7-207ENST00000449811 TMEM67Q5HYA8 995 aa16.4■□□□□ 0.22
CPSF7-207ENST00000449811 VWCEQ96DN2 955 aa16.4■□□□□ 0.22
CPSF7-207ENST00000449811 BCL11AQ9H165 835 aa16.4■□□□□ 0.22
CPSF7-207ENST00000449811 CERS4Q9HA82 394 aa16.4■□□□□ 0.22
CPSF7-207ENST00000449811 FEM1BQ9UK73 627 aa16.4■□□□□ 0.22
CPSF7-207ENST00000449811 COG5Q9UP83 839 aa16.4■□□□□ 0.22
CPSF7-207ENST00000449811 GREB1LQ9C091 1923 aaPredicted RBP16.39■□□□□ 0.21
CPSF7-207ENST00000449811 DYNC1LI2O43237 492 aaPredicted RBP16.39■□□□□ 0.21
CPSF7-207ENST00000449811 CHGBP05060 677 aa16.39■□□□□ 0.21
CPSF7-207ENST00000449811 PFKMP08237 780 aa16.39■□□□□ 0.21
CPSF7-207ENST00000449811 RASA1P20936 1047 aa16.39■□□□□ 0.21
CPSF7-207ENST00000449811 PSMC6P62333 389 aa16.39■□□□□ 0.21
CPSF7-207ENST00000449811 TTLL4Q14679 1199 aa16.39■□□□□ 0.21
CPSF7-207ENST00000449811 UBE3CQ15386 1083 aa16.39■□□□□ 0.21
CPSF7-207ENST00000449811 FAM133AQ8N9E0 248 aa16.39■□□□□ 0.21
CPSF7-207ENST00000449811 KIF1BPQ96EK5 621 aa16.39■□□□□ 0.21
CPSF7-207ENST00000449811 AGBL1Q96MI9 1066 aa16.39■□□□□ 0.21
CPSF7-207ENST00000449811 BOLA2Q9H3K6 86 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms