RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 ATP1A3P13637 1013 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 TCP1P17987 556 aaKnown RBP11.5□□□□□ -0.57
CTC1-202ENST00000449476 CYP2J2P51589 502 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 MXRA7P84157 204 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 ICA1Q05084 483 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 SLFN13Q68D06 897 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 FBXO11Q86XK2 927 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 CUEDC2Q9H467 287 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 MAGEF1Q9HAY2 307 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 ASIC3Q9UHC3 531 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 CDC23Q9UJX2 597 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 ADGRL3Q9HAR2 1447 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 LAD1O00515 517 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 ZBED4O75132 1171 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 POLR2FP61218 127 aaKnown RBP11.5□□□□□ -0.57
CTC1-202ENST00000449476 CCDC63Q8NA47 563 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.5□□□□□ -0.57
CTC1-202ENST00000449476 E9PCH4 1651 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 FAM170AA1A519 330 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 SNAP23O00161 211 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 PRPF3O43395 683 aaKnown RBP11.49□□□□□ -0.57
CTC1-202ENST00000449476 BUB1O43683 1085 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 PPARDQ03181 441 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 ADAM9Q13443 819 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 SLFN12Q8IYM2 578 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 SLC35F6Q8N357 371 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 TMOD4Q9NZQ9 345 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 COMMD10Q9Y6G5 202 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 ABCB4P21439 1286 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 RBL2Q08999 1139 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 RABGGTAQ92696 567 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 MYO1AQ9UBC5 1043 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 SETBP1Q9Y6X0 1596 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 EEF1GP26641 437 aaKnown RBP11.49□□□□□ -0.57
CTC1-202ENST00000449476 PDE6BP35913 854 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 TRPC3Q13507 836 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 SREK1Q8WXA9 508 aaKnown RBP11.49□□□□□ -0.57
CTC1-202ENST00000449476 EPSTI1Q96J88 318 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.49□□□□□ -0.57
CTC1-202ENST00000449476 AMFRQ9UKV5 643 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 AGTPBP1Q9UPW5 1226 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 TULP4Q9NRJ4 1543 aa11.49□□□□□ -0.57
CTC1-202ENST00000449476 KCNK3O14649 394 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 CYP2E1P05181 493 aaPredicted RBP11.48□□□□□ -0.57
CTC1-202ENST00000449476 USP17L8P0C7I0 530 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 GTF2A1P52655 376 aaPredicted RBP11.48□□□□□ -0.57
CTC1-202ENST00000449476 CYP4A11Q02928 519 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 CCDC105Q8IYK2 499 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 LARP4BQ92615 738 aaKnown RBP11.48□□□□□ -0.57
CTC1-202ENST00000449476 AK8Q96MA6 479 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 ATP5DP30049 168 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 GBP6Q6ZN66 633 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 FAM178BQ8IXR5 827 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 SYNE4Q8N205 404 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 DHTKD1Q96HY7 919 aaPredicted RBP11.48□□□□□ -0.57
CTC1-202ENST00000449476 KIAA1024Q9UPX6 916 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 COL4A3BPQ9Y5P4 624 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 KRT71Q3SY84 523 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 GPATCH4Q5T3I0 446 aaKnown RBP11.48□□□□□ -0.57
CTC1-202ENST00000449476 MIER3Q7Z3K6 550 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 SRGAP1Q7Z6B7 1085 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 VSTM4Q8IW00 320 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 MAK16Q9BXY0 300 aaKnown RBP11.48□□□□□ -0.57
CTC1-202ENST00000449476 CLEC11AQ9Y240 323 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 SPATA31A3Q5VYP0 1347 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 SETDB1Q15047 1291 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 P2RX5Q93086 422 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 CCDC17Q96LX7 622 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 PODXL2Q9NZ53 605 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 TXNDC16Q9P2K2 825 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 USP31Q70CQ4 1352 aa11.48□□□□□ -0.57
CTC1-202ENST00000449476 ASPRV1Q53RT3 343 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 ZNF658Q5TYW1 1059 aaPredicted RBP11.47□□□□□ -0.57
CTC1-202ENST00000449476 TBC1D10CQ8IV04 446 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 TBCKQ8TEA7 893 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 METTL14Q9HCE5 456 aaKnown RBP11.47□□□□□ -0.57
CTC1-202ENST00000449476 CDC42BPGQ6DT37 1551 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 TMEM232C9JQI7 657 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 APBA3O96018 575 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 H2AFZP0C0S5 128 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 GUCY2FP51841 1108 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 PTPROQ16827 1216 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 H2AFVQ71UI9 128 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 NLRX1Q86UT6 975 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 IWS1Q96ST2 819 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 LARSQ9P2J5 1176 aaKnown RBP11.47□□□□□ -0.57
CTC1-202ENST00000449476 USTQ9Y2C2 406 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 ENC1O14682 589 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 ECM2O94769 699 aaPredicted RBP11.47□□□□□ -0.57
CTC1-202ENST00000449476 ARID5BQ14865 1188 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 DIXDC1Q155Q3 683 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 LONRF2Q1L5Z9 754 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 DCUN1D2Q6PH85 259 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 FAM196AQ6ZSG2 479 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 GJA10Q969M2 543 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 DYNLL2Q96FJ2 89 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 ABCC12Q96J65 1359 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 INPP5BP32019 993 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 UAP1Q16222 522 aaPredicted RBP11.47□□□□□ -0.57
CTC1-202ENST00000449476 CROCCP2Q86T23 111 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms