RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 SLC38A10Q9HBR0 1119 aa13.76□□□□□ -0.21
RCL1-208ENST00000448872 ZFYVE28Q9HCC9 887 aa13.76□□□□□ -0.21
RCL1-208ENST00000448872 TSKSQ9UJT2 592 aa13.76□□□□□ -0.21
RCL1-208ENST00000448872 V9GY48 417 aaPredicted RBP13.76□□□□□ -0.21
RCL1-208ENST00000448872 LOC285556D6RIA3 1793 aa13.76□□□□□ -0.21
RCL1-208ENST00000448872 ZNF536O15090 1300 aa13.76□□□□□ -0.21
RCL1-208ENST00000448872 MYPNQ86TC9 1320 aa13.76□□□□□ -0.21
RCL1-208ENST00000448872 CCDC196A0A1B0GTZ2 297 aa13.75□□□□□ -0.21
RCL1-208ENST00000448872 CPLX1O14810 134 aa13.75□□□□□ -0.21
RCL1-208ENST00000448872 TLR2O60603 784 aa13.75□□□□□ -0.21
RCL1-208ENST00000448872 ZBED4O75132 1171 aa13.75□□□□□ -0.21
RCL1-208ENST00000448872 ALDH1A1P00352 501 aa13.75□□□□□ -0.21
RCL1-208ENST00000448872 SLC4A3P48751 1232 aa13.75□□□□□ -0.21
RCL1-208ENST00000448872 QRICH1Q2TAL8 776 aa13.75□□□□□ -0.21
RCL1-208ENST00000448872 MTMR8Q96EF0 704 aa13.75□□□□□ -0.21
RCL1-208ENST00000448872 SPZ1Q9BXG8 430 aa13.75□□□□□ -0.21
RCL1-208ENST00000448872 SLC26A6Q9BXS9 759 aa13.75□□□□□ -0.21
RCL1-208ENST00000448872 SH2B1Q9NRF2 756 aaPredicted RBP13.75□□□□□ -0.21
RCL1-208ENST00000448872 K7ELQ4 463 aaPredicted RBP13.74□□□□□ -0.21
RCL1-208ENST00000448872 IFNAR1P17181 557 aa13.74□□□□□ -0.21
RCL1-208ENST00000448872 MAP2K1Q02750 393 aaPredicted RBP13.74□□□□□ -0.21
RCL1-208ENST00000448872 PLS1Q14651 629 aa13.74□□□□□ -0.21
RCL1-208ENST00000448872 PPP2R5BQ15173 497 aa13.74□□□□□ -0.21
RCL1-208ENST00000448872 C17orf99Q6UX52 265 aa13.74□□□□□ -0.21
RCL1-208ENST00000448872 NSUN7Q8NE18 718 aaKnown RBP13.74□□□□□ -0.21
RCL1-208ENST00000448872 IL27Q8NEV9 243 aa13.74□□□□□ -0.21
RCL1-208ENST00000448872 DDX11Q96FC9 970 aa13.74□□□□□ -0.21
RCL1-208ENST00000448872 ZNF214Q9UL59 606 aaPredicted RBP13.74□□□□□ -0.21
RCL1-208ENST00000448872 RIPK3Q9Y572 518 aa13.74□□□□□ -0.21
RCL1-208ENST00000448872 THSD7BQ9C0I4 1608 aa13.74□□□□□ -0.21
RCL1-208ENST00000448872 ZBTB5O15062 677 aa13.74□□□□□ -0.21
RCL1-208ENST00000448872 BCRP11274 1271 aa13.74□□□□□ -0.21
RCL1-208ENST00000448872 SMARCA1P28370 1054 aa13.74□□□□□ -0.21
RCL1-208ENST00000448872 GCLCP48506 637 aaPredicted RBP13.74□□□□□ -0.21
RCL1-208ENST00000448872 USH1GQ495M9 461 aa13.74□□□□□ -0.21
RCL1-208ENST00000448872 HSCBQ8IWL3 235 aa13.74□□□□□ -0.21
RCL1-208ENST00000448872 GPKOWQ92917 476 aaPredicted RBP eCLIP13.74□□□□□ -0.213e-7■□□□□ 9.9
RCL1-208ENST00000448872 RRP36Q96EU6 259 aaKnown RBP13.74□□□□□ -0.21
RCL1-208ENST00000448872 WBP1LQ9NX94 342 aa13.74□□□□□ -0.21
RCL1-208ENST00000448872 RABGAP1Q9Y3P9 1069 aa13.74□□□□□ -0.21
RCL1-208ENST00000448872 CTDP1Q9Y5B0 961 aaPredicted RBP13.74□□□□□ -0.21
RCL1-208ENST00000448872 PNMA6FA0A0J9YX94 578 aa13.73□□□□□ -0.21
RCL1-208ENST00000448872 PTPDC1A2A3K4 754 aa13.73□□□□□ -0.21
RCL1-208ENST00000448872 FMNL1O95466 1100 aaPredicted RBP13.73□□□□□ -0.21
RCL1-208ENST00000448872 ICAM1P05362 532 aa13.73□□□□□ -0.21
RCL1-208ENST00000448872 FDPSP14324 419 aaKnown RBP13.73□□□□□ -0.21
RCL1-208ENST00000448872 STAT3P40763 770 aa13.73□□□□□ -0.21
RCL1-208ENST00000448872 ERVK-9P63128 1117 aa13.73□□□□□ -0.21
RCL1-208ENST00000448872 ERVK-24P63145 666 aa13.73□□□□□ -0.21
RCL1-208ENST00000448872 PKN1Q16512 942 aa13.73□□□□□ -0.21
RCL1-208ENST00000448872 SNRNP48Q6IEG0 339 aaKnown RBP13.73□□□□□ -0.21
RCL1-208ENST00000448872 MB21D1Q8N884 522 aa13.73□□□□□ -0.21
RCL1-208ENST00000448872 GPRC5AQ8NFJ5 357 aa13.73□□□□□ -0.21
RCL1-208ENST00000448872 COA7Q96BR5 231 aa13.73□□□□□ -0.21
RCL1-208ENST00000448872 AIFM3Q96NN9 605 aa13.73□□□□□ -0.21
RCL1-208ENST00000448872 MOV10L1Q9BXT6 1211 aaKnown RBP13.73□□□□□ -0.21
RCL1-208ENST00000448872 SPATC1LQ9H0A9 340 aa13.73□□□□□ -0.21
RCL1-208ENST00000448872 PORCNQ9H237 461 aa13.73□□□□□ -0.21
RCL1-208ENST00000448872 HOMER2Q9NSB8 354 aa13.73□□□□□ -0.21
RCL1-208ENST00000448872 MORF4L1Q9UBU8 362 aa13.73□□□□□ -0.21
RCL1-208ENST00000448872 CCPG1Q9ULG6 757 aa13.73□□□□□ -0.21
RCL1-208ENST00000448872 PRPF3O43395 683 aaKnown RBP13.72□□□□□ -0.21
RCL1-208ENST00000448872 SSRP1Q08945 709 aaKnown RBP13.72□□□□□ -0.21
RCL1-208ENST00000448872 CUL4AQ13619 759 aa13.72□□□□□ -0.21
RCL1-208ENST00000448872 WWC2Q6AWC2 1192 aa13.72□□□□□ -0.21
RCL1-208ENST00000448872 HEATR3Q7Z4Q2 680 aa13.72□□□□□ -0.21
RCL1-208ENST00000448872 JMYQ8N9B5 988 aa13.72□□□□□ -0.21
RCL1-208ENST00000448872 SHISA4Q96DD7 197 aa13.72□□□□□ -0.21
RCL1-208ENST00000448872 CFHR5Q9BXR6 569 aa13.72□□□□□ -0.21
RCL1-208ENST00000448872 TEX13BQ9BXU2 312 aa13.72□□□□□ -0.21
RCL1-208ENST00000448872 EFCC1Q9HA90 598 aa13.72□□□□□ -0.21
RCL1-208ENST00000448872 SEC63Q9UGP8 760 aaKnown RBP13.72□□□□□ -0.21
RCL1-208ENST00000448872 MYH4Q9Y623 1939 aa13.72□□□□□ -0.21
RCL1-208ENST00000448872 PTPRFP10586 1907 aa13.71□□□□□ -0.21
RCL1-208ENST00000448872 ATP2A1O14983 1001 aa13.71□□□□□ -0.21
RCL1-208ENST00000448872 ALAS1P13196 640 aa13.71□□□□□ -0.21
RCL1-208ENST00000448872 ERCC3P19447 782 aa13.71□□□□□ -0.21
RCL1-208ENST00000448872 CTGFP29279 349 aa13.71□□□□□ -0.21
RCL1-208ENST00000448872 CAP1Q01518 475 aa13.71□□□□□ -0.21
RCL1-208ENST00000448872 FAM110CQ1W6H9 321 aa13.71□□□□□ -0.21
RCL1-208ENST00000448872 MUM1L1Q5H9M0 696 aa13.71□□□□□ -0.21
RCL1-208ENST00000448872 TYW1BQ6NUM6 668 aa13.71□□□□□ -0.21
RCL1-208ENST00000448872 CPLX2Q6PUV4 134 aaKnown RBP13.71□□□□□ -0.21
RCL1-208ENST00000448872 FBXO11Q86XK2 927 aa13.71□□□□□ -0.21
RCL1-208ENST00000448872 SMARCC2Q8TAQ2 1214 aa13.71□□□□□ -0.21
RCL1-208ENST00000448872 GTF3C2Q8WUA4 911 aaPredicted RBP13.71□□□□□ -0.21
RCL1-208ENST00000448872 BEGAINQ9BUH8 593 aa13.71□□□□□ -0.21
RCL1-208ENST00000448872 RNF26Q9BY78 433 aaPredicted RBP13.71□□□□□ -0.21
RCL1-208ENST00000448872 ARHGAP39Q9C0H5 1083 aa13.71□□□□□ -0.21
RCL1-208ENST00000448872 GJB4Q9NTQ9 266 aa13.71□□□□□ -0.21
RCL1-208ENST00000448872 SAGE1Q9NXZ1 904 aa13.71□□□□□ -0.21
RCL1-208ENST00000448872 ORC3Q9UBD5 711 aaPredicted RBP13.71□□□□□ -0.21
RCL1-208ENST00000448872 RBM19Q9Y4C8 960 aaKnown RBP13.71□□□□□ -0.21
RCL1-208ENST00000448872 CDKL5O76039 1030 aa13.7□□□□□ -0.22
RCL1-208ENST00000448872 FDX1P10109 184 aa13.7□□□□□ -0.22
RCL1-208ENST00000448872 FOSBP53539 338 aa13.7□□□□□ -0.22
RCL1-208ENST00000448872 OAZ1P54368 228 aa13.7□□□□□ -0.22
RCL1-208ENST00000448872 AKAP17AQ02040 695 aaKnown RBP13.7□□□□□ -0.22
RCL1-208ENST00000448872 PFKFB3Q16875 520 aaPredicted RBP13.7□□□□□ -0.22
RCL1-208ENST00000448872 NCAPG2Q86XI2 1143 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms