RNA–Protein interactions for RNA: ENST00000448850.5

APP-210, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-210ENST00000448850 BARHL2Q9NY43 387 aa16.8■□□□□ 0.28
APP-210ENST00000448850 MYPNQ86TC9 1320 aa16.8■□□□□ 0.28
APP-210ENST00000448850 WDR33Q9C0J8 1336 aaKnown RBP16.8■□□□□ 0.28
APP-210ENST00000448850 RBBP6Q7Z6E9 1792 aaKnown RBP16.8■□□□□ 0.28
APP-210ENST00000448850 CCL15-CCL14A0A0B4J2E2 113 aa16.8■□□□□ 0.28
APP-210ENST00000448850 PPP1R11O60927 126 aaPredicted RBP16.8■□□□□ 0.28
APP-210ENST00000448850 SLC10A3P09131 477 aa16.8■□□□□ 0.28
APP-210ENST00000448850 FDX1P10109 184 aa16.8■□□□□ 0.28
APP-210ENST00000448850 PABPC4Q13310 644 aaKnown RBP eCLIP16.8■□□□□ 0.28
APP-210ENST00000448850 CCL15Q16663 113 aa16.8■□□□□ 0.28
APP-210ENST00000448850 GPAT2Q6NUI2 795 aa16.8■□□□□ 0.28
APP-210ENST00000448850 SHISA4Q96DD7 197 aa16.8■□□□□ 0.28
APP-210ENST00000448850 HOXC10Q9NYD6 342 aa16.8■□□□□ 0.28
APP-210ENST00000448850 ZDHHC9Q9Y397 364 aa16.8■□□□□ 0.28
APP-210ENST00000448850 STXBP3O00186 592 aa16.79■□□□□ 0.28
APP-210ENST00000448850 BRD1O95696 1058 aa16.79■□□□□ 0.28
APP-210ENST00000448850 FBXO11Q86XK2 927 aa16.79■□□□□ 0.28
APP-210ENST00000448850 FAM177A1Q8N128 213 aaPredicted RBP16.79■□□□□ 0.28
APP-210ENST00000448850 CCDC102AQ96A19 550 aa16.79■□□□□ 0.28
APP-210ENST00000448850 COA7Q96BR5 231 aa16.79■□□□□ 0.28
APP-210ENST00000448850 ATG4CQ96DT6 458 aa16.79■□□□□ 0.28
APP-210ENST00000448850 AMNQ9BXJ7 453 aa16.79■□□□□ 0.28
APP-210ENST00000448850 SLC38A10Q9HBR0 1119 aa16.79■□□□□ 0.28
APP-210ENST00000448850 ADAMTS5Q9UNA0 930 aa16.79■□□□□ 0.28
APP-210ENST00000448850 KCNJ14Q9UNX9 436 aa16.79■□□□□ 0.28
APP-210ENST00000448850 ZSCAN22P10073 491 aaPredicted RBP16.78■□□□□ 0.28
APP-210ENST00000448850 NAPAP54920 295 aa16.78■□□□□ 0.28
APP-210ENST00000448850 TYW1BQ6NUM6 668 aa16.78■□□□□ 0.28
APP-210ENST00000448850 CCDC148Q8NFR7 591 aa16.78■□□□□ 0.28
APP-210ENST00000448850 CCDC12Q8WUD4 166 aaPredicted RBP16.78■□□□□ 0.28
APP-210ENST00000448850 BRI3BPQ8WY22 251 aa16.78■□□□□ 0.28
APP-210ENST00000448850 PHF20Q9BVI0 1012 aa16.78■□□□□ 0.28
APP-210ENST00000448850 VWA5AO00534 786 aa16.77■□□□□ 0.28
APP-210ENST00000448850 ZBED4O75132 1171 aa16.77■□□□□ 0.28
APP-210ENST00000448850 MMP1P03956 469 aa16.77■□□□□ 0.28
APP-210ENST00000448850 APLP1P51693 650 aa16.77■□□□□ 0.28
APP-210ENST00000448850 IRX3P78415 501 aaPredicted RBP16.77■□□□□ 0.28
APP-210ENST00000448850 TRAF1Q13077 416 aa16.77■□□□□ 0.28
APP-210ENST00000448850 CCDC174Q6PII3 467 aa16.77■□□□□ 0.28
APP-210ENST00000448850 ASCC2Q9H1I8 757 aaPredicted RBP16.77■□□□□ 0.28
APP-210ENST00000448850 CREBZFQ9NS37 354 aa16.77■□□□□ 0.28
APP-210ENST00000448850 CTDP1Q9Y5B0 961 aaPredicted RBP16.77■□□□□ 0.28
APP-210ENST00000448850 PCDHA1Q9Y5I3 950 aa16.77■□□□□ 0.28
APP-210ENST00000448850 MANSC4A6NHS7 340 aaPredicted RBP16.77■□□□□ 0.27
APP-210ENST00000448850 SPDYE16A6NNV3 312 aaPredicted RBP16.77■□□□□ 0.27
APP-210ENST00000448850 FAM155AB1AL88 458 aaPredicted RBP16.77■□□□□ 0.27
APP-210ENST00000448850 OSBPP22059 807 aa16.77■□□□□ 0.27
APP-210ENST00000448850 NLRP5P59047 1200 aa16.77■□□□□ 0.27
APP-210ENST00000448850 FOXD4L5Q5VV16 416 aaPredicted RBP16.77■□□□□ 0.27
APP-210ENST00000448850 PPP1R18Q6NYC8 613 aa16.77■□□□□ 0.27
APP-210ENST00000448850 FOXD4L4Q8WXT5 416 aaPredicted RBP16.77■□□□□ 0.27
APP-210ENST00000448850 P2RX7Q99572 595 aaKnown RBP16.77■□□□□ 0.27
APP-210ENST00000448850 SLC45A1Q9Y2W3 748 aa16.77■□□□□ 0.27
APP-210ENST00000448850 TESPA1A2RU30 521 aaPredicted RBP16.76■□□□□ 0.27
APP-210ENST00000448850 BTBD19C9JJ37 291 aa16.76■□□□□ 0.27
APP-210ENST00000448850 ICAM1P05362 532 aa16.76■□□□□ 0.27
APP-210ENST00000448850 SAFBQ15424 915 aaKnown RBP eCLIP16.76■□□□□ 0.27
APP-210ENST00000448850 USH1GQ495M9 461 aa16.76■□□□□ 0.27
APP-210ENST00000448850 MCTP1Q6DN14 999 aa16.76■□□□□ 0.27
APP-210ENST00000448850 ANKRD23Q86SG2 305 aa16.76■□□□□ 0.27
APP-210ENST00000448850 ZMYND12Q9H0C1 365 aa16.76■□□□□ 0.27
APP-210ENST00000448850 ZNF536O15090 1300 aa16.76■□□□□ 0.27
APP-210ENST00000448850 ESYT2A0FGR8 921 aa16.75■□□□□ 0.27
APP-210ENST00000448850 F13A1P00488 732 aa16.75■□□□□ 0.27
APP-210ENST00000448850 CALML3P27482 149 aa16.75■□□□□ 0.27
APP-210ENST00000448850 LBX2Q6XYB7 198 aa16.75■□□□□ 0.27
APP-210ENST00000448850 FERMT3Q86UX7 667 aa16.75■□□□□ 0.27
APP-210ENST00000448850 REPS2Q8NFH8 660 aa16.75■□□□□ 0.27
APP-210ENST00000448850 PNMA3Q9UL41 463 aa16.75■□□□□ 0.27
APP-210ENST00000448850 MYH7BA7E2Y1 1941 aa16.75■□□□□ 0.27
APP-210ENST00000448850 ZNFX1Q9P2E3 1918 aaKnown RBP16.75■□□□□ 0.27
APP-210ENST00000448850 SMCO2A6NFE2 343 aa16.75■□□□□ 0.27
APP-210ENST00000448850 PDHXO00330 501 aa16.75■□□□□ 0.27
APP-210ENST00000448850 OAZ1P54368 228 aa16.75■□□□□ 0.27
APP-210ENST00000448850 HERVK_113P62684 666 aa16.75■□□□□ 0.27
APP-210ENST00000448850 KIF23Q02241 960 aaPredicted RBP16.75■□□□□ 0.27
APP-210ENST00000448850 NPY5RQ15761 445 aa16.75■□□□□ 0.27
APP-210ENST00000448850 GALNT17Q6IS24 598 aa16.75■□□□□ 0.27
APP-210ENST00000448850 PAXIP1Q6ZW49 1069 aaPredicted RBP16.75■□□□□ 0.27
APP-210ENST00000448850 DIS3L2Q8IYB7 885 aaKnown RBP16.75■□□□□ 0.27
APP-210ENST00000448850 CPXCR1Q8N123 301 aa16.75■□□□□ 0.27
APP-210ENST00000448850 AGBL1Q96MI9 1066 aa16.75■□□□□ 0.27
APP-210ENST00000448850 PTPN18Q99952 460 aa16.75■□□□□ 0.27
APP-210ENST00000448850 RAVER2Q9HCJ3 691 aaKnown RBP16.75■□□□□ 0.27
APP-210ENST00000448850 C6orf50Q9HD87 102 aa16.75■□□□□ 0.27
APP-210ENST00000448850 PNMA2Q9UL42 364 aa16.75■□□□□ 0.27
APP-210ENST00000448850 ABCB11O95342 1321 aa16.74■□□□□ 0.27
APP-210ENST00000448850 RASSF10A6NK89 507 aa16.74■□□□□ 0.27
APP-210ENST00000448850 GNA11P29992 359 aa16.74■□□□□ 0.27
APP-210ENST00000448850 KRT2P35908 639 aa16.74■□□□□ 0.27
APP-210ENST00000448850 DEFB115Q30KQ5 88 aa16.74■□□□□ 0.27
APP-210ENST00000448850 FAM43AQ8N2R8 423 aa16.74■□□□□ 0.27
APP-210ENST00000448850 MB21D1Q8N884 522 aa16.74■□□□□ 0.27
APP-210ENST00000448850 BRMS1Q9HCU9 246 aa16.74■□□□□ 0.27
APP-210ENST00000448850 CCPG1Q9ULG6 757 aa16.74■□□□□ 0.27
APP-210ENST00000448850 PCDHA4Q9UN74 947 aa16.74■□□□□ 0.27
APP-210ENST00000448850 BTBD18B2RXH4 712 aa16.73■□□□□ 0.27
APP-210ENST00000448850 ATP2A1O14983 1001 aa16.73■□□□□ 0.27
APP-210ENST00000448850 TAL1P17542 331 aaPredicted RBP16.73■□□□□ 0.27
APP-210ENST00000448850 INHBEP58166 350 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms