RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 PGBD1Q96JS3 809 aa28.55■■■□□ 2.16
RFFL-206ENST00000447669 ANP32EQ9BTT0 268 aa28.55■■■□□ 2.16
RFFL-206ENST00000447669 TANGO6Q9C0B7 1094 aa28.55■■■□□ 2.16
RFFL-206ENST00000447669 RPAP3Q9H6T3 665 aaPredicted RBP28.55■■■□□ 2.16
RFFL-206ENST00000447669 TMEM260Q9NX78 707 aa28.55■■■□□ 2.16
RFFL-206ENST00000447669 PCDHA1Q9Y5I3 950 aa28.55■■■□□ 2.16
RFFL-206ENST00000447669 ANO1Q5XXA6 986 aa28.54■■■□□ 2.16
RFFL-206ENST00000447669 GZF1Q9H116 711 aaPredicted RBP28.54■■■□□ 2.16
RFFL-206ENST00000447669 RTEL1Q9NZ71 1219 aa28.54■■■□□ 2.16
RFFL-206ENST00000447669 BIN2Q9UBW5 565 aaPredicted RBP28.54■■■□□ 2.16
RFFL-206ENST00000447669 PCDHB6Q9Y5E3 794 aa28.54■■■□□ 2.16
RFFL-206ENST00000447669 LPAR1Q92633 364 aa28.53■■■□□ 2.16
RFFL-206ENST00000447669 RCOR1Q9UKL0 485 aa28.53■■■□□ 2.16
RFFL-206ENST00000447669 WDR46O15213 610 aaKnown RBP28.53■■■□□ 2.16
RFFL-206ENST00000447669 LINC00301Q8NCQ3 95 aa28.53■■■□□ 2.16
RFFL-206ENST00000447669 CHURC1Q8WUH1 139 aa28.53■■■□□ 2.16
RFFL-206ENST00000447669 OTUD5Q96G74 571 aa28.53■■■□□ 2.16
RFFL-206ENST00000447669 FEM1BQ9UK73 627 aa28.53■■■□□ 2.16
RFFL-206ENST00000447669 UBE2SQ16763 222 aa28.52■■■□□ 2.16
RFFL-206ENST00000447669 C6orf50Q9HD87 102 aa28.52■■■□□ 2.16
RFFL-206ENST00000447669 MARCKSP29966 332 aaPredicted RBP28.52■■■□□ 2.16
RFFL-206ENST00000447669 USP14P54578 494 aa28.52■■■□□ 2.16
RFFL-206ENST00000447669 JAKMIP3Q5VZ66 844 aa28.52■■■□□ 2.16
RFFL-206ENST00000447669 ANKRD13AQ8IZ07 590 aa28.52■■■□□ 2.16
RFFL-206ENST00000447669 CCDC12Q8WUD4 166 aaPredicted RBP28.52■■■□□ 2.16
RFFL-206ENST00000447669 POLR3EQ9NVU0 708 aa28.52■■■□□ 2.16
RFFL-206ENST00000447669 FBXO11Q86XK2 927 aa28.51■■■□□ 2.15
RFFL-206ENST00000447669 DAGLBQ8NCG7 672 aa28.51■■■□□ 2.15
RFFL-206ENST00000447669 MRVI1Q9Y6F6 885 aa28.51■■■□□ 2.15
RFFL-206ENST00000447669 IRF6O14896 467 aa28.5■■■□□ 2.15
RFFL-206ENST00000447669 FLOT1O75955 427 aa28.5■■■□□ 2.15
RFFL-206ENST00000447669 STK38Q15208 465 aa28.5■■■□□ 2.15
RFFL-206ENST00000447669 ATL3Q6DD88 541 aa28.5■■■□□ 2.15
RFFL-206ENST00000447669 LDHDQ86WU2 507 aa28.5■■■□□ 2.15
RFFL-206ENST00000447669 WNK4Q96J92 1243 aa28.5■■■□□ 2.15
RFFL-206ENST00000447669 AMNQ9BXJ7 453 aa28.5■■■□□ 2.15
RFFL-206ENST00000447669 PTPRFP10586 1907 aa28.5■■■□□ 2.15
RFFL-206ENST00000447669 NASPP49321 788 aaPredicted RBP28.5■■■□□ 2.15
RFFL-206ENST00000447669 ADCY7P51828 1080 aa28.5■■■□□ 2.15
RFFL-206ENST00000447669 PTPAQ15257 358 aa28.5■■■□□ 2.15
RFFL-206ENST00000447669 ELP1O95163 1332 aa28.49■■■□□ 2.15
RFFL-206ENST00000447669 hCG_1984214I3L0E3 225 aa28.49■■■□□ 2.15
RFFL-206ENST00000447669 GNA11P29992 359 aa28.49■■■□□ 2.15
RFFL-206ENST00000447669 MAP3K11Q16584 847 aa28.49■■■□□ 2.15
RFFL-206ENST00000447669 RILPL1Q5EBL4 403 aa28.49■■■□□ 2.15
RFFL-206ENST00000447669 FAM160B2Q86V87 743 aa28.49■■■□□ 2.15
RFFL-206ENST00000447669 ZNF713Q8N859 430 aaPredicted RBP28.49■■■□□ 2.15
RFFL-206ENST00000447669 SLF1Q9BQI6 1058 aa28.49■■■□□ 2.15
RFFL-206ENST00000447669 RANBP17Q9H2T7 1088 aaKnown RBP28.49■■■□□ 2.15
RFFL-206ENST00000447669 USP17L15C9J2P7 530 aa28.48■■■□□ 2.15
RFFL-206ENST00000447669 USP17L13C9JLJ4 530 aa28.48■■■□□ 2.15
RFFL-206ENST00000447669 USP17L11C9JVI0 530 aa28.48■■■□□ 2.15
RFFL-206ENST00000447669 USP17L18D6R9N7 530 aa28.48■■■□□ 2.15
RFFL-206ENST00000447669 USP17L22D6RA61 530 aa28.48■■■□□ 2.15
RFFL-206ENST00000447669 USP17L17D6RBQ6 530 aa28.48■■■□□ 2.15
RFFL-206ENST00000447669 USP17L19D6RCP7 530 aa28.48■■■□□ 2.15
RFFL-206ENST00000447669 USP17L20D6RJB6 530 aa28.48■■■□□ 2.15
RFFL-206ENST00000447669 ME1P48163 572 aa28.48■■■□□ 2.15
RFFL-206ENST00000447669 UBE2HP62256 183 aa28.48■■■□□ 2.15
RFFL-206ENST00000447669 USP17L24Q0WX57 530 aa28.48■■■□□ 2.15
RFFL-206ENST00000447669 CSPP1Q1MSJ5 1256 aa28.48■■■□□ 2.15
RFFL-206ENST00000447669 INF2Q27J81 1249 aa28.48■■■□□ 2.15
RFFL-206ENST00000447669 USP17L6PQ6QN14 398 aa28.48■■■□□ 2.15
RFFL-206ENST00000447669 ARMC9Q7Z3E5 817 aa28.48■■■□□ 2.15
RFFL-206ENST00000447669 PLA2G6O60733 806 aa28.48■■■□□ 2.15
RFFL-206ENST00000447669 ZNF174Q15697 407 aa28.48■■■□□ 2.15
RFFL-206ENST00000447669 PCDHA7Q9UN72 937 aa28.48■■■□□ 2.15
RFFL-206ENST00000447669 CCDC194A0A1B0GVG4 234 aa28.47■■■□□ 2.15
RFFL-206ENST00000447669 ESYT2A0FGR8 921 aa28.47■■■□□ 2.15
RFFL-206ENST00000447669 C19orf81C9J6K1 198 aa28.47■■■□□ 2.15
RFFL-206ENST00000447669 SPTLC2O15270 562 aa28.47■■■□□ 2.15
RFFL-206ENST00000447669 PTMSP20962 102 aa28.47■■■□□ 2.15
RFFL-206ENST00000447669 KLHL40Q2TBA0 621 aa28.47■■■□□ 2.15
RFFL-206ENST00000447669 GALNT17Q6IS24 598 aa28.47■■■□□ 2.15
RFFL-206ENST00000447669 AGBL1Q96MI9 1066 aa28.47■■■□□ 2.15
RFFL-206ENST00000447669 PSTPIP2Q9H939 334 aa28.47■■■□□ 2.15
RFFL-206ENST00000447669 RIC8AQ9NPQ8 531 aa28.47■■■□□ 2.15
RFFL-206ENST00000447669 SLC39A14Q15043 492 aa28.47■■■□□ 2.15
RFFL-206ENST00000447669 TREML2Q5T2D2 321 aa28.47■■■□□ 2.15
RFFL-206ENST00000447669 CAVIN1Q6NZI2 390 aaKnown RBP28.47■■■□□ 2.15
RFFL-206ENST00000447669 REXO1Q8N1G1 1221 aaKnown RBP28.47■■■□□ 2.15
RFFL-206ENST00000447669 PRPF38AQ8NAV1 312 aaKnown RBP28.47■■■□□ 2.15
RFFL-206ENST00000447669 PARP14Q460N5 1801 aa28.46■■■□□ 2.15
RFFL-206ENST00000447669 OPLAHO14841 1288 aa28.46■■■□□ 2.15
RFFL-206ENST00000447669 CPXCR1Q8N123 301 aa28.46■■■□□ 2.15
RFFL-206ENST00000447669 OPTNQ96CV9 577 aa28.46■■■□□ 2.15
RFFL-206ENST00000447669 TMOD4Q9NZQ9 345 aa28.46■■■□□ 2.15
RFFL-206ENST00000447669 RLFQ13129 1914 aa28.45■■■□□ 2.15
RFFL-206ENST00000447669 YEATS4O95619 227 aa28.45■■■□□ 2.15
RFFL-206ENST00000447669 ERO1BQ86YB8 467 aa28.45■■■□□ 2.15
RFFL-206ENST00000447669 ATG4CQ96DT6 458 aa28.45■■■□□ 2.15
RFFL-206ENST00000447669 C12orf42Q96LP6 360 aa28.45■■■□□ 2.15
RFFL-206ENST00000447669 CELF2O95319 508 aaKnown RBP28.45■■■□□ 2.14
RFFL-206ENST00000447669 GJA5P36382 358 aa28.45■■■□□ 2.14
RFFL-206ENST00000447669 SKOR2Q2VWA4 1001 aaPredicted RBP28.45■■■□□ 2.14
RFFL-206ENST00000447669 LDLRAD1Q5T700 205 aa28.45■■■□□ 2.14
RFFL-206ENST00000447669 PPP1R18Q6NYC8 613 aa28.45■■■□□ 2.14
RFFL-206ENST00000447669 TBC1D5Q92609 795 aa28.45■■■□□ 2.14
RFFL-206ENST00000447669 CUL5Q93034 780 aa28.45■■■□□ 2.14
RFFL-206ENST00000447669 PPP1R9AQ9ULJ8 1098 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms