RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 ZBED4O75132 1171 aa16.52■□□□□ 0.24
SREBF1-207ENST00000447641 SLC25A27O95847 323 aa16.52■□□□□ 0.24
SREBF1-207ENST00000447641 HMGB1P09429 215 aaKnown RBP16.52■□□□□ 0.24
SREBF1-207ENST00000447641 STAT3P40763 770 aa16.52■□□□□ 0.24
SREBF1-207ENST00000447641 TROAPQ12815 778 aa16.52■□□□□ 0.24
SREBF1-207ENST00000447641 CCDC96Q2M329 555 aa16.52■□□□□ 0.24
SREBF1-207ENST00000447641 SAMD1Q6SPF0 538 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-207ENST00000447641 PLEKHH3Q7Z736 793 aa16.52■□□□□ 0.24
SREBF1-207ENST00000447641 DIS3LQ8TF46 1054 aaKnown RBP16.52■□□□□ 0.24
SREBF1-207ENST00000447641 BACH2Q9BYV9 841 aa16.52■□□□□ 0.24
SREBF1-207ENST00000447641 MROH8Q9H579 483 aa16.52■□□□□ 0.24
SREBF1-207ENST00000447641 GPCPD1Q9NPB8 672 aa16.52■□□□□ 0.24
SREBF1-207ENST00000447641 CDH23Q9H251 3354 aa16.52■□□□□ 0.23
SREBF1-207ENST00000447641 SMCHD1A6NHR9 2005 aa16.52■□□□□ 0.23
SREBF1-207ENST00000447641 ZNF536O15090 1300 aa16.51■□□□□ 0.23
SREBF1-207ENST00000447641 FRMPD2Q68DX3 1309 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-207ENST00000447641 CUL9Q8IWT3 2517 aa16.51■□□□□ 0.23
SREBF1-207ENST00000447641 A0A1W2PPC1 479 aa16.51■□□□□ 0.23
SREBF1-207ENST00000447641 PALM3A6NDB9 673 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-207ENST00000447641 STRNO43815 780 aa16.51■□□□□ 0.23
SREBF1-207ENST00000447641 ERCC3P19447 782 aa16.51■□□□□ 0.23
SREBF1-207ENST00000447641 PTPREP23469 700 aa16.51■□□□□ 0.23
SREBF1-207ENST00000447641 SLC16A2P36021 539 aa16.51■□□□□ 0.23
SREBF1-207ENST00000447641 C8orf34Q49A92 452 aa16.51■□□□□ 0.23
SREBF1-207ENST00000447641 ASPRV1Q53RT3 343 aa16.51■□□□□ 0.23
SREBF1-207ENST00000447641 SYDE2Q5VT97 1194 aa16.51■□□□□ 0.23
SREBF1-207ENST00000447641 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.51■□□□□ 0.23
SREBF1-207ENST00000447641 SGMS1Q86VZ5 419 aa16.51■□□□□ 0.23
SREBF1-207ENST00000447641 MAP3K14Q99558 947 aa16.51■□□□□ 0.23
SREBF1-207ENST00000447641 TEX13BQ9BXU2 312 aa16.51■□□□□ 0.23
SREBF1-207ENST00000447641 CRISPLD2Q9H0B8 497 aa16.51■□□□□ 0.23
SREBF1-207ENST00000447641 RANBP17Q9H2T7 1088 aaKnown RBP16.51■□□□□ 0.23
SREBF1-207ENST00000447641 ZNF236Q9UL36 1845 aa16.5■□□□□ 0.23
SREBF1-207ENST00000447641 SLC15A5A6NIM6 579 aa16.5■□□□□ 0.23
SREBF1-207ENST00000447641 DLL1O00548 723 aa16.5■□□□□ 0.23
SREBF1-207ENST00000447641 SEC24BO95487 1268 aa16.5■□□□□ 0.23
SREBF1-207ENST00000447641 GOLGA8HP0CJ92 632 aa16.5■□□□□ 0.23
SREBF1-207ENST00000447641 XRCC5P13010 732 aaKnown RBP16.5■□□□□ 0.23
SREBF1-207ENST00000447641 COPB2P35606 906 aa16.5■□□□□ 0.23
SREBF1-207ENST00000447641 GRB14Q14449 540 aa16.5■□□□□ 0.23
SREBF1-207ENST00000447641 PLS1Q14651 629 aa16.5■□□□□ 0.23
SREBF1-207ENST00000447641 GRM4Q14833 912 aa16.5■□□□□ 0.23
SREBF1-207ENST00000447641 ABRAQ8N0Z2 381 aa16.5■□□□□ 0.23
SREBF1-207ENST00000447641 FBXL16Q8N461 479 aa16.5■□□□□ 0.23
SREBF1-207ENST00000447641 PXYLP1Q8TE99 480 aa16.5■□□□□ 0.23
SREBF1-207ENST00000447641 IL17RAQ96F46 866 aa16.5■□□□□ 0.23
SREBF1-207ENST00000447641 DEFB118Q96PH6 123 aa16.5■□□□□ 0.23
SREBF1-207ENST00000447641 MAD2L2Q9UI95 211 aa16.5■□□□□ 0.23
SREBF1-207ENST00000447641 RIPK3Q9Y572 518 aa16.5■□□□□ 0.23
SREBF1-207ENST00000447641 NR2E3Q9Y5X4 410 aa16.5■□□□□ 0.23
SREBF1-207ENST00000447641 PRUNE2Q8WUY3 3088 aa16.5■□□□□ 0.23
SREBF1-207ENST00000447641 PARP1P09874 1014 aaKnown RBP16.49■□□□□ 0.23
SREBF1-207ENST00000447641 MNX1P50219 401 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-207ENST00000447641 IKQ13123 557 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-207ENST00000447641 CCAR1Q8IX12 1150 aaKnown RBP16.49■□□□□ 0.23
SREBF1-207ENST00000447641 STAG2Q8N3U4 1231 aa16.49■□□□□ 0.23
SREBF1-207ENST00000447641 SLC17A8Q8NDX2 589 aa16.49■□□□□ 0.23
SREBF1-207ENST00000447641 SOCS4Q8WXH5 440 aa16.49■□□□□ 0.23
SREBF1-207ENST00000447641 JAKMIP1Q96N16 626 aaKnown RBP16.49■□□□□ 0.23
SREBF1-207ENST00000447641 GDF15Q99988 308 aa16.49■□□□□ 0.23
SREBF1-207ENST00000447641 NUDT12Q9BQG2 462 aa16.49■□□□□ 0.23
SREBF1-207ENST00000447641 TM6SF1Q9BZW5 370 aa16.49■□□□□ 0.23
SREBF1-207ENST00000447641 RAVER2Q9HCJ3 691 aaKnown RBP16.49■□□□□ 0.23
SREBF1-207ENST00000447641 EVI5O60447 810 aa16.48■□□□□ 0.23
SREBF1-207ENST00000447641 IGHA2P01877 340 aa16.48■□□□□ 0.23
SREBF1-207ENST00000447641 HOXC6P09630 235 aa16.48■□□□□ 0.23
SREBF1-207ENST00000447641 SNAP25P60880 206 aa16.48■□□□□ 0.23
SREBF1-207ENST00000447641 MAP2K5Q13163 448 aa16.48■□□□□ 0.23
SREBF1-207ENST00000447641 SLC35G1Q2M3R5 365 aa16.48■□□□□ 0.23
SREBF1-207ENST00000447641 SNRNP48Q6IEG0 339 aaKnown RBP16.48■□□□□ 0.23
SREBF1-207ENST00000447641 CATIPQ7Z7H3 387 aa16.48■□□□□ 0.23
SREBF1-207ENST00000447641 NCAPG2Q86XI2 1143 aa16.48■□□□□ 0.23
SREBF1-207ENST00000447641 ZNF654Q8IZM8 581 aa16.48■□□□□ 0.23
SREBF1-207ENST00000447641 CPXCR1Q8N123 301 aa16.48■□□□□ 0.23
SREBF1-207ENST00000447641 PAWRQ96IZ0 340 aaKnown RBP16.48■□□□□ 0.23
SREBF1-207ENST00000447641 AGBL1Q96MI9 1066 aa16.48■□□□□ 0.23
SREBF1-207ENST00000447641 LRRC2Q9BYS8 371 aa16.48■□□□□ 0.23
SREBF1-207ENST00000447641 AGXT2Q9BYV1 514 aa16.48■□□□□ 0.23
SREBF1-207ENST00000447641 UBA5Q9GZZ9 404 aa16.48■□□□□ 0.23
SREBF1-207ENST00000447641 ZSWIM6Q9HCJ5 1215 aa16.48■□□□□ 0.23
SREBF1-207ENST00000447641 TSHZ2Q9NRE2 1034 aa16.48■□□□□ 0.23
SREBF1-207ENST00000447641 ISY1Q9ULR0 285 aaKnown RBP16.48■□□□□ 0.23
SREBF1-207ENST00000447641 KLRF2D3W0D1 207 aa16.47■□□□□ 0.23
SREBF1-207ENST00000447641 DDAH1O94760 285 aa16.47■□□□□ 0.23
SREBF1-207ENST00000447641 ICAM1P05362 532 aa16.47■□□□□ 0.23
SREBF1-207ENST00000447641 CPA1P15085 419 aa16.47■□□□□ 0.23
SREBF1-207ENST00000447641 RPS6KB1P23443 525 aa16.47■□□□□ 0.23
SREBF1-207ENST00000447641 PSMA5P28066 241 aa16.47■□□□□ 0.23
SREBF1-207ENST00000447641 TKFCQ3LXA3 575 aa16.47■□□□□ 0.23
SREBF1-207ENST00000447641 BLOC1S2Q6QNY1 142 aa16.47■□□□□ 0.23
SREBF1-207ENST00000447641 ADGRF4Q8IZF3 695 aa16.47■□□□□ 0.23
SREBF1-207ENST00000447641 MTMR8Q96EF0 704 aa16.47■□□□□ 0.23
SREBF1-207ENST00000447641 TCEANC2Q96MN5 208 aa16.47■□□□□ 0.23
SREBF1-207ENST00000447641 CPVLQ9H3G5 476 aa16.47■□□□□ 0.23
SREBF1-207ENST00000447641 IVNS1ABPQ9Y6Y0 642 aa16.47■□□□□ 0.23
SREBF1-207ENST00000447641 COBLO75128 1261 aa16.46■□□□□ 0.23
SREBF1-207ENST00000447641 FCER1AP12319 257 aa16.46■□□□□ 0.23
SREBF1-207ENST00000447641 ADORA2AP29274 412 aa16.46■□□□□ 0.23
SREBF1-207ENST00000447641 RGS2P41220 211 aa16.46■□□□□ 0.23
SREBF1-207ENST00000447641 ANAPC15P60006 121 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms