RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 ICE2Q659A1 982 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 CMTR1Q8N1G2 835 aaKnown RBP6.75□□□□□ -1.33
PROM1-201ENST00000447510 FANCBQ8NB91 859 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 ACER1Q8TDN7 264 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 WASF1Q92558 559 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 OPTNQ96CV9 577 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 RRP36Q96EU6 259 aaKnown RBP6.75□□□□□ -1.33
PROM1-201ENST00000447510 ERO1AQ96HE7 468 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 CLMNQ96JQ2 1002 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 EFCC1Q9HA90 598 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.75□□□□□ -1.33
PROM1-201ENST00000447510 DLEC1Q9Y238 1755 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 ARFGEF1Q9Y6D6 1849 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 TMEM88BA6NKF7 163 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 KLRF2D3W0D1 207 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 TULP2O00295 520 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 CLGNO14967 610 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 LIFRP42702 1097 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 FKBP1BP68106 108 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 CEBPZQ03701 1054 aaKnown RBP6.74□□□□□ -1.33
PROM1-201ENST00000447510 TYRO3Q06418 890 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 SNAPC2Q13487 334 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 APOA5Q6Q788 366 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 RBM46Q8TBY0 533 aaKnown RBP6.74□□□□□ -1.33
PROM1-201ENST00000447510 NUP88Q99567 741 aaPredicted RBP6.74□□□□□ -1.33
PROM1-201ENST00000447510 GINM1Q9NU53 330 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 NYAP2Q9P242 653 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 TFIP11Q9UBB9 837 aaKnown RBP6.74□□□□□ -1.33
PROM1-201ENST00000447510 AKAP11Q9UKA4 1901 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 MARCH6O60337 910 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 DDAH1O94760 285 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 OSBPP22059 807 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 ADD1P35611 737 aaKnown RBP6.74□□□□□ -1.33
PROM1-201ENST00000447510 SLC16A2P36021 539 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 ECE1P42892 770 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 ZNF165P49910 485 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 FAM83BQ5T0W9 1011 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 GPATCH4Q5T3I0 446 aaKnown RBP6.74□□□□□ -1.33
PROM1-201ENST00000447510 LARP1BQ659C4 914 aaKnown RBP6.74□□□□□ -1.33
PROM1-201ENST00000447510 CCDC174Q6PII3 467 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 HEATR3Q7Z4Q2 680 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 SMARCE1Q969G3 411 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 CCDC88AQ3V6T2 1871 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 CCL15-CCL14A0A0B4J2E2 113 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 hCG_1642624A0A1W2PR95 340 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 STX6O43752 255 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 URI1O94763 535 aaPredicted RBP6.74□□□□□ -1.33
PROM1-201ENST00000447510 ATP2B1P20020 1258 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 PDCP20941 246 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 OAS2P29728 719 aaKnown RBP6.74□□□□□ -1.33
PROM1-201ENST00000447510 CLCN6P51797 869 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 GABPAQ06546 454 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 ZRSR1Q15695 479 aaKnown RBP6.74□□□□□ -1.33
PROM1-201ENST00000447510 CCL15Q16663 113 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 FASTKD5Q7L8L6 764 aaKnown RBP6.74□□□□□ -1.33
PROM1-201ENST00000447510 TEPSINQ96N21 525 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 LY9Q9HBG7 655 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 TPCN1Q9ULQ1 816 aa6.74□□□□□ -1.33
PROM1-201ENST00000447510 V9GY48 417 aaPredicted RBP6.74□□□□□ -1.33
PROM1-201ENST00000447510 C19orf81C9J6K1 198 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 PTPRAP18433 802 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 ANTXR2P58335 489 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 GUCY1B3Q02153 619 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 TRAF1Q13077 416 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 SNW1Q13573 536 aaKnown RBP6.73□□□□□ -1.33
PROM1-201ENST00000447510 SHROOM1Q2M3G4 852 aaPredicted RBP6.73□□□□□ -1.33
PROM1-201ENST00000447510 ASPRV1Q53RT3 343 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 NBPF3Q9H094 633 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 ZSWIM4Q9H7M6 989 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 VCPKMTQ9H867 229 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 JRKLQ9Y4A0 524 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 ATRNL1Q5VV63 1379 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 NRDCO43847 1150 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 PNMA6AP0CW24 399 aaPredicted RBP6.73□□□□□ -1.33
PROM1-201ENST00000447510 ZSCAN22P10073 491 aaPredicted RBP6.73□□□□□ -1.33
PROM1-201ENST00000447510 PDIA3P30101 505 aaKnown RBP6.73□□□□□ -1.33
PROM1-201ENST00000447510 NLRP5P59047 1200 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 FAM193AP78312 1265 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 EXOSC10Q01780 885 aaKnown RBP6.73□□□□□ -1.33
PROM1-201ENST00000447510 PPP2R5BQ15173 497 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 ME3Q16798 604 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 DEFB115Q30KQ5 88 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 RGMBQ6NW40 437 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 TATDN1Q6P1N9 297 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 CUL5Q93034 780 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 PHKBQ93100 1093 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 CCDC102AQ96A19 550 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 ZNF274Q96GC6 653 aaPredicted RBP6.73□□□□□ -1.33
PROM1-201ENST00000447510 C8orf76Q96K31 380 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 LZTS2Q9BRK4 669 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 EPC1Q9H2F5 836 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 DNAJC18Q9H819 358 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 CBX8Q9HC52 389 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.73□□□□□ -1.33
PROM1-201ENST00000447510 RRP15Q9Y3B9 282 aaKnown RBP6.73□□□□□ -1.33
PROM1-201ENST00000447510 NDUFB10O96000 172 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 CETPP11597 493 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 STAT2P52630 851 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 NAPAP54920 295 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 BACE1P56817 501 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms